# HG changeset patch # User iuc # Date 1606049717 0 # Node ID b819e969b5d993a6cd5cd3c43aee38cfcc63c2f8 # Parent 25811bd45c44099ada40eea7e87dea85a74a785b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_vsnp_excel commit 02d2967f77e3fa5a18aea63dc84aa9ab418dc165" diff -r 25811bd45c44 -r b819e969b5d9 data_manager/vsnp_excel_fetcher.py --- a/data_manager/vsnp_excel_fetcher.py Fri May 08 18:02:37 2020 -0400 +++ b/data_manager/vsnp_excel_fetcher.py Sun Nov 22 12:55:17 2020 +0000 @@ -35,7 +35,7 @@ def download(dbkey, name, url, out_file): with open(out_file) as fh: - params = json.loads(fh.read()) + params = json.load(fh) workdir = params['output_data'][0]['extra_files_path'] os.makedirs(workdir) @@ -51,7 +51,7 @@ data_manager_json["data_tables"]["vsnp_excel"] = data_manager_entry with open(out_file, 'w') as fh: - fh.write(json.dumps(data_manager_json, sort_keys=True)) + json.dump(data_manager_json, fh, sort_keys=True) parser = argparse.ArgumentParser()