Mercurial > repos > iuc > delly_filter
comparison filter.xml @ 3:d2590fe6793f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/delly commit d76130cdcb21f0390b4e68e733d38575fd5cc6c7"
| author | iuc |
|---|---|
| date | Tue, 14 Dec 2021 19:06:53 +0000 |
| parents | 6184cfc70e28 |
| children |
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| 2:6184cfc70e28 | 3:d2590fe6793f |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool id="delly_filter" name="Delly filter" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="18.01"> | 2 <tool id="delly_filter" name="Delly filter" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="18.01"> |
| 3 <description>somatic or germline structural variants</description> | 3 <description>somatic or germline structural variants</description> |
| 4 <expand macro="bio_tools"/> | |
| 4 <macros> | 5 <macros> |
| 5 <import>macros.xml</import> | 6 <import>macros.xml</import> |
| 6 </macros> | 7 </macros> |
| 7 <expand macro="requirements"/> | 8 <expand macro="requirements"/> |
| 8 <expand macro="version_command"/> | 9 <expand macro="version_command"/> |
| 229 <has_size value="2451" delta="10"/> | 230 <has_size value="2451" delta="10"/> |
| 230 </assert_contents> | 231 </assert_contents> |
| 231 </output> | 232 </output> |
| 232 <output name="out_vcf"> | 233 <output name="out_vcf"> |
| 233 <assert_contents> | 234 <assert_contents> |
| 234 <has_n_lines n="142"/> | 235 <has_n_lines n="143"/> |
| 235 <has_line line="##fileformat=VCFv4.2"/> | 236 <has_line line="##fileformat=VCFv4.2"/> |
| 236 <has_line line="#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR"/> | 237 <has_line line="#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NORMAL	TUMOR"/> |
| 237 </assert_contents> | 238 </assert_contents> |
| 238 </output> | 239 </output> |
| 239 </test> | 240 </test> |