Mercurial > repos > iuc > deseq2

diff deseq2.xml @ 21:a6fc9228e1a0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit 05bc13637dc9f8e523bc72844ff6eb0794f98ad3
author iuc
date Mon, 28 Jan 2019 12:04:08 -0500
parents 89d26b11d452
children e5c8afac22a7
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--- a/deseq2.xml	Thu Dec 06 15:49:22 2018 -0500
+++ b/deseq2.xml	Mon Jan 28 12:04:08 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="deseq2" name="DESeq2" version="2.11.40.4">
+<tool id="deseq2" name="DESeq2" version="2.11.40.5">
     <description>Determines differentially expressed features from count tables</description>
     <requirements>
         <requirement type="package" version="1.20.0">bioconductor-deseq2</requirement>
@@ -41,6 +41,7 @@
 #import json
 #import os
 Rscript '${__tool_directory__}/deseq2.R'
+    --cores \${GALAXY_SLOTS:-1}
     -o '$deseq_out'
     #if $pdf:
         -p '$plots'