Mercurial > repos > iuc > dexseq
comparison dexseq_helper.py @ 1:f1c406f9554c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dexseq commit 93f63600a8d492e6c9006c1426fbae84de5ca232
author | iuc |
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date | Sun, 29 Jan 2017 06:59:35 -0500 |
parents | 4ca0e679f21e |
children | 62adf13b86ea |
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0:4ca0e679f21e | 1:f1c406f9554c |
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1 | |
2 from galaxy.tools.parameters import DataToolParameter | |
3 | |
4 def validate_input( trans, error_map, param_values, page_param_map ): | 1 def validate_input( trans, error_map, param_values, page_param_map ): |
5 """ | 2 """ |
6 Validates the user input, before execution. | 3 Validates the user input, before execution. |
7 """ | 4 """ |
8 factors = param_values['rep_factorName'] | 5 factors = param_values['rep_factorName'] |
17 factor_duplication = True | 14 factor_duplication = True |
18 break | 15 break |
19 factor_name_list.append( fn ) | 16 factor_name_list.append( fn ) |
20 | 17 |
21 level_name_list = list() | 18 level_name_list = list() |
22 factor_index_list = list() | |
23 | 19 |
24 for level in ['factorLevel1', 'factorLevel2']: | 20 for level in ['factorLevel1', 'factorLevel2']: |
25 # level names under one factor should be unique | 21 # level names under one factor should be unique |
26 fl = factor[level] | 22 fl = factor[level] |
27 if fl in level_name_list: | 23 if fl in level_name_list: |
36 | 32 |
37 if factor_duplication: | 33 if factor_duplication: |
38 error_map['rep_factorName'] = [ dict() for t in factors ] | 34 error_map['rep_factorName'] = [ dict() for t in factors ] |
39 for i in range( len( factors ) ): | 35 for i in range( len( factors ) ): |
40 error_map['rep_factorName'][i]['factorName'] = 'Factor names need to be unique.' | 36 error_map['rep_factorName'][i]['factorName'] = 'Factor names need to be unique.' |
41 |