Mercurial > repos > iuc > dimet_differential_analysis
comparison macros.xml @ 6:6a63c1d832db draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/DIMet commit 3dba8748fbc8cc8e89ffc08e5febe0a0527a96a5
| author | iuc |
|---|---|
| date | Fri, 21 Jun 2024 18:50:24 +0000 |
| parents | 78f776370dfb |
| children | fff032d6115a |
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| 5:78f776370dfb | 6:6a63c1d832db |
|---|---|
| 1 <macros> | 1 <macros> |
| 2 <token name="@TOOL_VERSION@">0.2.4</token> | 2 <token name="@TOOL_VERSION@">0.2.4</token> |
| 3 <token name="@VERSION_SUFFIX@">2</token> | 3 <token name="@VERSION_SUFFIX@">3</token> |
| 4 <xml name="requirements"> | 4 <xml name="requirements"> |
| 5 <requirements> | 5 <requirements> |
| 6 <requirement type="package" version="@TOOL_VERSION@">dimet</requirement> | 6 <requirement type="package" version="@TOOL_VERSION@">dimet</requirement> |
| 7 </requirements> | 7 </requirements> |
| 8 </xml> | 8 </xml> |
| 596 ln -s '$me_or_frac_contrib_file' data/me_or_frac_contrib.csv && | 596 ln -s '$me_or_frac_contrib_file' data/me_or_frac_contrib.csv && |
| 597 #end if | 597 #end if |
| 598 | 598 |
| 599 ]]></token> | 599 ]]></token> |
| 600 <token name="@INIT_CONFIG@"><![CDATA[ | 600 <token name="@INIT_CONFIG@"><![CDATA[ |
| 601 mkdir -p '$__new_file_path__/config' && | 601 mkdir -p 'config' && |
| 602 touch '$__new_file_path__/config/config.yaml' && | 602 touch 'config/config.yaml' && |
| 603 ]]></token> | 603 ]]></token> |
| 604 <token name="@REMOVE_CONFIG@"><![CDATA[ | 604 <token name="@REMOVE_CONFIG@"><![CDATA[ |
| 605 && rm -r '$__new_file_path__/config' | 605 && rm -r 'config' |
| 606 ]]></token> | 606 ]]></token> |
| 607 <token name="@INIT_ABUNDANCE_PLOT@"><![CDATA[ | 607 <token name="@INIT_ABUNDANCE_PLOT@"><![CDATA[ |
| 608 | 608 |
| 609 mkdir -p data && | 609 mkdir -p data && |
| 610 | |
| 611 #if $metadata_path: | 610 #if $metadata_path: |
| 612 ln -s '$metadata_path' data/metadata.csv && | 611 ln -s '$metadata_path' data/metadata.csv && |
| 613 #end if | 612 #end if |
| 614 #if $abundance_file: | 613 #if $abundance_file: |
| 615 ln -s '$abundance_file' data/abundance.csv && | 614 ln -s '$abundance_file' data/abundance.csv && |