comparison dimet_differential_analysis.xml @ 7:fff032d6115a draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/DIMet commit 6da96d865a3a557cfa3ad09e1cfa830519e73748

6:6a63c1d832db

**Running the analysis**

You can precise how you want your analysis to be executed, with the parameters:

- **conditions**: the conditions present in your data, to perform the pairwise comparison.

- **comparisons** : the pairs of [condition, timepoint] groups to compare

- **datatypes** : the measures type(s) that you want to run (see above in Input data files section)

- **statistical_test** : choose, by type of measure, the specific statistical test to be applied.

 Kruskal-Wallis, Mann-Whitney, Wilcoxon’s signed rank test, Wilcoxon’s rank sum test
 t-test, and permutation test are currently offered (we use the trusted functions from scipy library https://docs.scipy.org/doc/scipy/reference/stats.html).

7:fff032d6115a

**Running the analysis**

You can precise how you want your analysis to be executed, with the parameters:

- **datatypes** : the measures type(s) that you want to run (see above in Input data files section)

- **conditions**: the two 'Conditions' boxes must be filled in a coherent order, keeping in mind that the last specified condition is the reference or control.

- **timepoint** : the time point at which the two conditions will be compared.

- **statistical_test** : choose, by type of measure, the specific statistical test to be applied.

 Kruskal-Wallis, Mann-Whitney, Wilcoxon’s signed rank test, Wilcoxon’s rank sum test
 t-test, and permutation test are currently offered (we use the trusted functions from scipy library https://docs.scipy.org/doc/scipy/reference/stats.html).