changeset 1:79720105f8c0 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/DIMet commit 7568e92bfc4560d6e0287e7444455f55c86d135d

--- a/dimet_enrichment_plot.xml	Tue Oct 10 11:57:25 2023 +0000
+++ b/dimet_enrichment_plot.xml	Tue Jan 23 14:55:42 2024 +0000
@@ -29,13 +29,12 @@
                 _target_: dimet.method.MeanEnrichmentLinePlotConfig,
                 label: mean_enrichment_line_plot,
                 name: "Generate mean enrichment line plots",
-                color_lines_by: condition,
                 palette_condition: muted,
                 palette_metabolite: auto_multi_color,
                 xaxis_title: ${output_options.xaxis_title},
                 alpha: ${output_options.alpha},
                 plot_grouped_by_dict: null,
-                ###width_subplot: '${output_options.width_subplot}',
+                color_lines_by: '${output_options.color_lines_by}',
                 height_subplot: ${output_options.height_subplot},
                 figure_format:${output_options.figure_format},
                 as_grid:${output_options.as_grid}
@@ -67,6 +66,10 @@
                 <option value="pdf">Pdf</option>
                 <option value="svg">Svg</option>
             </param>
+            <param name="color_lines_by" type="select" value="condition" display="radio" label="Select color for lines" help="Please enter at max 1 format">
+                <option value="condition">Condition</option>
+                <option value="metabolite">Metabolite</option>
+            </param>
             <param name="alpha" type="float" min="0.0" max="1.0" value="1.0" label="alpha of subfig plots"
                    help="Default value is 1."/>
             <param name="height_subplot" type="float" min="1.0" max="15.0" value="6.4" label="height of subfig plots"
@@ -103,6 +106,7 @@
                 <param name="height_subplot" value="6.4"/>
                 <param name="width_subplot" value="4.0"/>
                 <param name="xaxis_title" value="Time"/>
+                <param name="color_lines_by" value="condition"/>
                 <param name="figure_format" value="svg"/>
             </section>
 
@@ -227,7 +231,7 @@
 
 You can test our tool with the data from our manuscript https://zenodo.org/record/8378887 (the pertinent
 files for you are located in the subfolders inside the data folder).
-Tou can also use the minimal data examples from https://zenodo.org/record/8380706
+You can also use the minimal data examples from https://zenodo.org/record/8380706
 
  ]]>
     </help>

--- a/macros.xml	Tue Oct 10 11:57:25 2023 +0000
+++ b/macros.xml	Tue Jan 23 14:55:42 2024 +0000
@@ -1,6 +1,6 @@
 <macros>
     <token name="@TOOL_VERSION@">0.1.4</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@EXECUTABLE@">pca</token>
     <xml name="factor_repeat">
         <repeat name="rep_factorName" title="Factor" min="1">