Mercurial > repos > iuc > disco
diff README.rst @ 0:6d447ebb2bf4 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/disco/ commit c1327b5793477da611684e92e0ce4635370c7666
author | iuc |
---|---|
date | Fri, 03 Nov 2017 15:44:23 -0400 |
parents | |
children | 6de3e77073ad |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Fri Nov 03 15:44:23 2017 -0400 @@ -0,0 +1,28 @@ +DISCO memory usage +================== + + +By default, this tool is configured to limit the memory consumption to 4G. +You might need to lower this limit if the machine(s) executing the jobs have less memory available. +If you have a lot of reads to assemble and a machine with enough memory, you can increase it. + +In both cases, you can set the DISCO_MAX_MEMORY environmental variable in the destination section of the job_conf.xml file: + +``` +<?xml version="1.0"?> +<!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). --> +<job_conf> + <plugins> + <plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/> + </plugins> + <handlers> + <handler id="main"/> + </handlers> + <destinations> + <destination id="local" runner="local"> + <env id="DISCO_MAX_MEMORY">4</env> + </destination> + </destinations> +</job_conf> +``` +