comparison test-data/annotate_custom.hmm @ 0:cf3f6929b52c draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dram commit df10ba86507266a6a6f83c9bbefb7191a41b46f5
author iuc
date Sat, 10 Dec 2022 21:14:46 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:cf3f6929b52c
1 HMMER3/b [3.0 | March 2010]
2 NAME CBM10
3 LENG 28
4 ALPH amino
5 RF no
6 CS no
7 MAP yes
8 DATE Thu Apr 21 15:04:19 2011
9 NSEQ 84
10 EFFN 8.697876
11 CKSUM 1939305542
12 STATS LOCAL MSV -7.3395 0.71998
13 STATS LOCAL VITERBI -7.4498 0.71998
14 STATS LOCAL FORWARD -3.9737 0.71998
15 HMM A C D E F G H I K L M N P Q R S T V W Y
16 m->m m->i m->d i->m i->i d->m d->d
17 COMPO 3.06033 2.42663 2.85747 2.77283 4.58046 2.24214 4.56942 3.29197 3.49682 3.34028 4.33944 2.39813 3.09771 2.95262 3.60586 2.44839 2.84569 3.24117 2.72301 3.28669
18 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
19 0.59367 5.66823 0.81137 0.61958 0.77255 0.00000 *
20 1 2.74340 3.47729 3.44643 2.64352 4.17985 3.79353 4.02282 3.57300 2.87097 3.22136 2.03109 3.38316 4.18747 1.79120 3.30841 2.03216 2.98385 3.28775 5.51287 4.21451 1 - -
21 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
22 0.00925 5.08381 5.80616 0.61958 0.77255 0.72961 0.65797
23 2 3.21366 0.33490 5.23672 5.17809 5.69922 3.92522 5.89105 5.22956 5.14397 4.94899 5.73770 3.11988 4.78715 5.32569 5.20447 2.46009 3.79312 4.43668 7.07761 5.95722 2 - -
24 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
25 0.00690 5.37599 6.09834 0.61958 0.77255 0.73167 0.65606
26 3 3.46517 6.03524 2.03286 2.67508 5.36194 2.25828 4.36563 4.86858 2.77875 4.33291 5.09631 1.07839 4.52524 2.62719 3.73072 2.75509 3.71412 4.41890 6.46315 5.00841 3 - -
27 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
28 0.04091 5.49877 3.32435 0.61958 0.77255 0.52775 0.89143
29 4 2.51597 5.24536 3.21395 3.79383 4.81190 3.30725 4.89534 4.21717 3.89295 3.90352 4.76570 4.13904 4.73005 4.17210 4.26805 3.51068 1.58681 3.86875 0.87084 4.95297 4 - -
30 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
31 0.00570 5.56595 6.28829 0.61958 0.77255 0.68571 0.70065
32 5 1.88947 5.00491 4.00042 3.04471 4.13869 4.17114 3.84034 3.52228 3.40249 3.22374 4.10809 3.86994 4.55537 3.71667 3.77844 2.67165 2.19530 3.28758 3.58338 1.27239 5 - -
33 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
34 0.00552 5.59725 6.31960 0.61958 0.77255 0.60266 0.79264
35 6 3.27926 5.74099 2.79040 2.94678 5.08062 1.27592 4.24831 3.41153 3.01359 4.05572 4.81107 3.21498 2.15563 2.32440 3.50951 2.31938 3.51838 4.13470 6.20511 4.79969 6 - -
36 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
37 0.00538 5.62391 6.34625 0.61958 0.77255 0.69965 0.68669
38 7 2.98451 5.68149 2.03356 2.71108 5.01893 3.09684 4.15179 4.49988 2.89056 3.98355 4.72438 1.82442 4.35665 2.68802 3.38251 2.74393 1.71463 4.06807 3.52699 3.90983 7 - -
39 2.68578 4.42235 2.77530 2.73110 3.46364 2.40479 3.72505 3.29364 2.67751 2.69365 4.24700 2.90357 2.73727 3.18156 2.89811 2.37897 2.77530 2.98528 4.58487 3.61513
40 0.14902 1.99000 6.34625 0.10689 2.28891 0.69965 0.68669
41 8 3.19090 5.50968 3.36180 2.55343 4.38053 1.63858 4.19450 3.04193 2.96578 2.23058 4.05970 3.07880 3.01639 2.64825 3.07570 2.49306 2.80765 3.53190 5.98768 4.62450 9 - -
42 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
43 0.00538 5.62391 6.34625 0.61958 0.77255 0.69965 0.68669
44 9 3.30193 4.76401 4.80184 4.21616 3.05893 4.40631 3.99626 3.08634 4.08448 2.95513 3.88012 3.73814 4.77402 4.29596 2.52547 3.69570 2.58705 2.52689 3.32984 0.97478 10 - -
45 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
46 0.00538 5.62391 6.34625 0.61958 0.77255 0.69965 0.68669
47 10 2.32473 5.64538 5.53793 5.57489 6.38350 4.40420 6.41981 5.93743 5.72131 5.61364 6.43501 5.22374 0.20710 5.86906 5.75943 3.97124 4.34771 5.06195 7.59408 6.65445 11 - -
48 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
49 0.00538 5.62391 6.34625 0.61958 0.77255 0.37205 1.16899
50 11 3.58384 4.93148 5.56416 4.95726 3.91906 4.79211 5.13458 1.77893 4.75282 1.13355 3.06266 4.95749 5.12252 4.86103 4.75631 4.11300 3.21564 2.07697 5.57505 1.83829 12 - -
51 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
52 0.00514 5.66823 6.39058 0.61958 0.77255 0.48576 0.95510
53 12 5.71966 0.02531 6.84380 6.91525 7.13022 5.70129 7.38113 7.10787 6.98034 6.56339 7.77682 6.87800 6.41517 7.25240 6.78559 5.99442 6.25794 6.61467 7.79024 7.35403 13 - -
54 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
55 0.00504 5.68941 6.41175 0.61958 0.77255 0.48576 0.95510
56 13 2.41147 3.20655 3.53784 2.40111 4.88318 4.02495 4.21901 3.78028 2.98003 3.87483 4.64917 2.70267 4.41694 2.30765 2.78055 1.76169 2.65304 2.19195 6.06083 4.68604 14 - -
57 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
58 0.00504 5.68941 6.41175 0.61958 0.77255 0.48576 0.95510
59 14 2.74185 5.72539 2.63675 2.93457 3.96591 3.69396 4.20563 4.54474 2.94831 4.03155 4.77475 1.41344 4.40698 2.54763 3.44063 1.76732 2.34335 4.11464 6.16929 4.76318 15 - -
60 2.68523 4.42403 2.77182 2.73232 3.46532 2.40585 3.72673 3.29532 2.67804 2.69505 4.24319 2.90431 2.73487 3.18324 2.89979 2.37553 2.77698 2.98553 4.58655 3.61389
61 0.58512 0.94092 2.94329 1.48029 0.25821 0.48576 0.95510
62 15 3.47982 6.33375 0.90693 3.16099 5.69480 4.26212 4.68181 5.20722 3.57120 4.67837 5.46228 3.14309 4.80418 1.88749 4.12162 3.20868 1.75159 4.75211 6.81751 5.34778 22 - -
63 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
64 0.00482 5.73317 6.45551 0.61958 0.77255 0.35526 1.20728
65 16 3.03343 5.90978 2.34772 2.94997 5.25600 1.51506 4.35220 4.74411 3.10705 4.21997 4.96183 2.22759 3.74056 3.22198 3.60642 1.81905 2.25397 4.30352 6.35034 4.93322 23 - -
66 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
67 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
68 17 3.51207 6.01185 1.26404 3.11779 5.37730 2.19861 4.47009 4.86743 3.25491 4.34850 5.10068 2.39503 4.64112 3.20246 3.76274 1.57873 3.14157 3.62631 6.48465 5.06120 24 - -
69 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
70 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
71 18 3.89420 6.14443 3.13584 3.62492 6.03391 0.48533 5.17450 5.54431 4.15735 5.07152 5.87515 4.13239 5.06029 2.80445 4.68604 2.69884 2.46312 4.97999 7.22793 5.81338 25 - -
72 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
73 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
74 19 6.30912 7.33417 6.81039 6.64222 5.43964 6.05006 6.52959 6.93630 5.86025 6.06276 7.37371 6.70200 6.63995 6.57460 3.64516 6.46847 6.65232 6.73483 0.06027 5.38285 26 - -
75 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
76 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
77 20 6.00082 7.26187 6.77093 6.85562 7.55194 0.01782 7.54852 7.76136 7.11483 7.00587 8.18240 6.97731 6.59859 7.35744 6.96444 6.25830 6.53175 7.11849 8.01758 7.77288 27 - -
78 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
79 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
80 21 2.85558 4.93320 5.01904 4.44670 3.96129 4.55274 4.87439 3.39985 4.30306 3.14653 4.07295 3.28033 4.94659 4.51322 4.45054 3.85882 2.48037 2.52459 0.81497 2.55247 28 - -
81 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
82 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
83 22 4.41613 7.05734 3.41290 0.33211 6.45410 4.55267 5.18133 6.03259 4.21333 5.45749 6.34879 4.02373 5.23058 2.45539 4.78815 2.76925 4.73557 5.53995 7.57078 6.01524 29 - -
84 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
85 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
86 23 4.65182 7.42009 2.82915 3.46315 6.72740 4.60645 5.35687 6.43956 4.62773 5.83877 6.82459 0.20801 5.34677 3.75994 5.38642 4.44973 5.00947 5.90632 7.92820 6.25143 30 - -
87 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
88 0.00434 5.83749 6.55983 0.61958 0.77255 0.48576 0.95510
89 24 3.03871 6.18494 3.21297 2.61231 5.52195 2.08712 4.55336 5.02325 3.36798 4.49202 5.24999 1.02698 4.71928 2.57491 3.89135 1.97384 3.88199 4.57575 6.62318 5.17899 31 - -
90 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
91 0.00504 5.68941 6.41175 0.61958 0.77255 0.48576 0.95510
92 25 1.99175 5.71724 3.48758 2.45228 5.05473 4.00588 4.19152 4.53331 2.79074 4.01804 4.28019 3.47693 4.39887 1.29371 2.11828 2.43019 3.30733 4.10393 6.15338 3.96473 32 - -
93 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
94 0.00504 5.68941 6.41175 0.61958 0.77255 0.48576 0.95510
95 26 3.43388 5.57346 3.69941 2.95794 4.91426 4.17833 4.53372 3.14649 3.35913 3.94178 4.77104 3.49497 4.65004 3.34410 3.80156 0.56810 2.88463 3.99116 6.19270 4.86921 33 - -
96 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
97 0.00504 5.68941 6.41175 0.61958 0.77255 0.48576 0.95510
98 27 4.26126 0.16067 6.38751 6.27473 5.43175 4.92822 6.57062 4.62334 5.97406 4.19855 3.09118 5.80642 5.70066 6.20961 5.93464 4.54901 4.79228 4.45835 7.10686 5.93986 34 - -
99 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
100 0.05109 5.66823 3.07142 0.61958 0.77255 0.48576 0.95510
101 28 4.30379 3.20827 6.48590 6.05149 4.97840 6.03933 6.92759 0.73764 6.03790 2.64441 4.67131 6.21290 6.22644 6.33190 6.22989 5.50520 4.56636 1.06340 7.18287 5.92811 35 - -
102 2.68632 4.41952 2.77533 2.73137 3.46368 2.40527 3.72508 3.29292 2.67755 2.69369 4.24704 2.90360 2.73753 3.18160 2.89814 2.37901 2.77533 2.98380 4.58491 3.61517
103 0.20465 1.68705 * 0.08250 2.53598 0.00000 *
104 //