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view test-data/annotated1.gff @ 2:0515750e7b10 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dram commit a5e28ac40a63a269100ddec5629aee5256ce00ef
author iuc
date Fri, 09 Feb 2024 21:36:50 +0000
parents cf3f6929b52c
children
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##gff-version 3
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	478	1935	128.32	+	0	ID=dataset_5327_scaffold_1510_1;conf=100.00;cscore=116.40;gc_cont=0.437;partial=00;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;rscore=4.78;sscore=11.92;start_type=ATG;tscore=2.70;uscore=4.44
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	2271	3857	216.97	+	0	ID=dataset_5327_scaffold_1510_2;conf=99.99;cscore=204.79;gc_cont=0.522;partial=00;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;rscore=6.26;sscore=12.18;start_type=ATG;tscore=2.70;uscore=3.87
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	4217	5395	100.23	+	0	ID=dataset_5327_scaffold_1510_3;conf=100.00;cscore=107.40;gc_cont=0.520;partial=00;rbs_motif=None;rbs_spacer=None;rscore=-11.04;sscore=-7.17;start_type=ATG;tscore=2.70;uscore=1.83
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	5385	6587	141.67	+	0	ID=dataset_5327_scaffold_1510_4;conf=100.00;cscore=125.51;gc_cont=0.526;partial=00;rbs_motif=GGAGG;rbs_spacer=5-10bp;rscore=12.15;sscore=16.15;start_type=ATG;tscore=2.70;uscore=0.08
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	6684	8315	209.17	+	0	ID=dataset_5327_scaffold_1510_5;conf=99.99;cscore=189.80;Dbxref="ko:K00179";gc_cont=0.559;partial=00;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;rscore=8.35;sscore=19.37;start_type=ATG;tscore=2.70;uscore=8.32
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	8453	9043	86.60	+	0	ID=dataset_5327_scaffold_1510_6;conf=100.00;cscore=72.66;Dbxref="ko:K00180";gc_cont=0.584;partial=00;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;rscore=8.35;sscore=13.94;start_type=ATG;tscore=2.70;uscore=2.89
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	9217	9381	10.26	+	0	ID=dataset_5327_scaffold_1510_7;conf=91.36;cscore=6.45;gc_cont=0.491;partial=00;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;rscore=3.10;sscore=3.81;start_type=GTG;tscore=-4.98;uscore=5.69
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	9671	10636	92.34	-	0	ID=dataset_5327_scaffold_1510_8;conf=100.00;cscore=90.86;gc_cont=0.475;partial=00;rbs_motif=AGGA;rbs_spacer=5-10bp;rscore=0.52;sscore=1.48;start_type=TTG;tscore=-1.88;uscore=3.50
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	10802	11086	32.01	+	0	ID=dataset_5327_scaffold_1510_9;conf=99.94;cscore=15.94;gc_cont=0.474;partial=00;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;rscore=6.26;sscore=16.08;start_type=ATG;tscore=2.70;uscore=7.11
dataset_5327_scaffold_1510	Prodigal_v2.6.3	CDS	11386	11451	6.71	+	0	ID=dataset_5327_scaffold_1510_10;conf=82.39;cscore=-2.06;Dbxref="ko:K03666";gc_cont=0.318;partial=01;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;rscore=6.26;sscore=8.77;start_type=ATG;tscore=2.70;uscore=4.81