Mercurial > repos > iuc > dram_neighborhoods
diff test-data/annotated1.tabular @ 0:fc93558da540 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dram commit df10ba86507266a6a6f83c9bbefb7191a41b46f5
| author | iuc |
|---|---|
| date | Sat, 10 Dec 2022 21:14:08 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/annotated1.tabular Sat Dec 10 21:14:08 2022 +0000 @@ -0,0 +1,520 @@ + fasta scaffold gene_position start_position end_position strandedness rank ko_id kegg_hit peptidase_id peptidase_family peptidase_hit peptidase_RBH peptidase_identity peptidase_bitScore peptidase_eVal pfam_hits cazy_id cazy_hits heme_regulatory_motif_count +dataset_4924_scaffold_1140_1 dataset_4924 scaffold_1140 1 233 793 -1 E 0 +dataset_4924_scaffold_1140_2 dataset_4924 scaffold_1140 2 910 1617 -1 D Vitamin B12 dependent methionine synthase, activation domain [PF02965.20] 0 +dataset_4924_scaffold_1140_3 dataset_4924 scaffold_1140 3 1614 3491 -1 D C-terminal domain of RACo the ASKHA domain [PF14574.9]; RACo middle region [PF17651.4]; RACo linker region [PF17650.4]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.30] 0 +dataset_4924_scaffold_1140_4 dataset_4924 scaffold_1140 4 3670 4368 -1 D UTRA domain [PF07702.16]; Bacterial regulatory proteins, gntR family [PF00392.24] 0 +dataset_4924_scaffold_1140_5 dataset_4924 scaffold_1140 5 4361 5023 -1 D B12 binding domain [PF02310.22]; B12 binding domain [PF02607.20] 0 +dataset_4924_scaffold_1140_6 dataset_4924 scaffold_1140 6 5287 5979 -1 D Protein of unknown function (DUF1638) [PF07796.14] 0 +dataset_4924_scaffold_1140_7 dataset_4924 scaffold_1140 7 6682 7914 -1 D Major Facilitator Superfamily [PF07690.19]; Transmembrane secretion effector [PF05977.16]; Sugar (and other) transporter [PF00083.27] 0 +dataset_4924_scaffold_1140_8 dataset_4924 scaffold_1140 8 8299 8454 -1 E 0 +dataset_4924_scaffold_1140_9 dataset_4924 scaffold_1140 9 8469 9626 -1 D Uroporphyrinogen decarboxylase (URO-D) [PF01208.20] 0 +dataset_4924_scaffold_1140_10 dataset_4924 scaffold_1140 10 9919 10062 -1 E 0 +dataset_4924_scaffold_1140_11 dataset_4924 scaffold_1140 11 10076 11230 -1 D Uroporphyrinogen decarboxylase (URO-D) [PF01208.20] 0 +dataset_4924_scaffold_1140_12 dataset_4924 scaffold_1140 12 11232 11870 -1 D B12 binding domain [PF02310.22]; B12 binding domain [PF02607.20] 0 +dataset_4924_scaffold_1140_13 dataset_4924 scaffold_1140 13 11978 12793 -1 C K15023 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] Pterin binding enzyme [PF00809.25] 0 +dataset_4924_scaffold_1140_14 dataset_4924 scaffold_1140 14 12970 14265 -1 D Acetyl-CoA hydrolase/transferase C-terminal domain [PF13336.9]; Acetyl-CoA hydrolase/transferase N-terminal domain [PF02550.18] 0 +dataset_4924_scaffold_1140_15 dataset_4924 scaffold_1140 15 14665 16461 -1 D Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; Helix-turn-helix domain [PF18024.4]; PAS fold [PF08448.13]; PAS domain [PF13426.10]; PAS fold [PF00989.28] 0 +dataset_4924_scaffold_1140_16 dataset_4924 scaffold_1140 16 16623 16886 -1 E 0 +dataset_4924_scaffold_1140_17 dataset_4924 scaffold_1140 17 16949 17716 -1 C K07546 (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180] MER1073240 S49C MER1073240 - subfamily S49C non-peptidase homologues (Acinetobacter bohemicus) [S49.UNC]#S49C#{peptidase unit: 84-212}~source N8Q6E4~ False 0.498 111.0 1.871e-25 Enoyl-CoA hydratase/isomerase [PF00378.23]; Enoyl-CoA hydratase/isomerase [PF16113.8] 0 +dataset_4924_scaffold_1140_18 dataset_4924 scaffold_1140 18 17764 18030 -1 D Acyl-CoA dehydrogenase, C-terminal domain [PF00441.27] 0 +dataset_4924_scaffold_1172_1 dataset_4924 scaffold_1172 1 3 233 1 D ACS/CODH beta subunit C-terminal [PF19436.2] 0 +dataset_4924_scaffold_1172_2 dataset_4924 scaffold_1172 2 366 1763 1 C K00197 acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] CO dehydrogenase/acetyl-CoA synthase delta subunit [PF03599.19]; Putative Fe-S cluster [PF04060.16] 0 +dataset_4924_scaffold_1172_3 dataset_4924 scaffold_1172 3 1862 2620 1 C K07321 CO dehydrogenase maturation factor AAA domain [PF13614.9] 0 +dataset_4924_scaffold_1172_4 dataset_4924 scaffold_1172 4 2633 3610 1 C K00194 acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245] CO dehydrogenase/acetyl-CoA synthase delta subunit [PF03599.19] 0 +dataset_4924_scaffold_1172_5 dataset_4924 scaffold_1172 5 3633 4427 1 C K15023 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] Pterin binding enzyme [PF00809.25] 0 +dataset_4924_scaffold_1172_6 dataset_4924 scaffold_1172 6 4887 7913 1 C K03388 heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] 4Fe-4S dicluster domain [PF14697.9]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.17]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10]; NAD(P)-binding Rossmann-like domain [PF13450.9]; FAD dependent oxidoreductase [PF12831.10]; 4Fe-4S dicluster domain [PF13247.9]; FAD binding domain [PF00890.27] 0 +dataset_4924_scaffold_1172_7 dataset_4924 scaffold_1172 7 8364 9320 1 C K00125 formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus [PF04432.16]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S dicluster domain [PF13534.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13746.9]; 4Fe-4S dicluster domain [PF12838.10] 0 +dataset_4924_scaffold_1172_8 dataset_4924 scaffold_1172 8 9331 10350 1 C K17996 sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] 4Fe-4S dicluster domain [PF17179.7] 1 +dataset_4924_scaffold_1172_9 dataset_4924 scaffold_1172 9 10350 11189 1 C K17995 sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] Oxidoreductase NAD-binding domain [PF00175.24]; Oxidoreductase FAD-binding domain [PF00970.27]; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B [PF10418.12] 0 +dataset_4924_scaffold_1172_10 dataset_4924 scaffold_1172 10 11309 12532 1 D 4Fe-4S dicluster domain [PF13534.9]; Cysteine-rich domain [PF02754.19]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S dicluster domain [PF13187.9] 0 +dataset_4924_scaffold_1172_11 dataset_4924 scaffold_1172 11 12659 17053 1 C K03388 heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] Pyridine nucleotide-disulphide oxidoreductase [PF07992.17]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.9]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13187.9]; NAD(P)-binding Rossmann-like domain [PF13450.9]; 4Fe-4S dicluster domain [PF12838.10]; HI0933-like protein [PF03486.17]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.30]; 4Fe-4S dicluster domain [PF13183.9]; FAD binding domain [PF00890.27]; 4Fe-4S dicluster domain [PF13247.9]; Flavin-binding monooxygenase-like [PF00743.22]; FAD binding domain [PF01494.22] 0 +dataset_4924_scaffold_1172_12 dataset_4924 scaffold_1172 12 17096 17191 -1 E 0 +dataset_4924_scaffold_1303_1 dataset_4924 scaffold_1303 1 2 79 1 D Elongation factor Tu C-terminal domain [PF03143.20] 0 +dataset_4924_scaffold_1303_2 dataset_4924 scaffold_1303 2 421 699 1 C K03073 preprotein translocase subunit SecE SecE/Sec61-gamma subunits of protein translocation complex [PF00584.23] 0 +dataset_4924_scaffold_1303_3 dataset_4924 scaffold_1303 3 740 1273 1 C K02601 transcription termination/antitermination protein NusG Transcription termination factor nusG [PF02357.22] 0 +dataset_4924_scaffold_1303_4 dataset_4924 scaffold_1303 4 1296 1721 1 C K02867 large subunit ribosomal protein L11 Ribosomal protein L11, RNA binding domain [PF00298.22]; Ribosomal protein L11, N-terminal domain [PF03946.17] 0 +dataset_4924_scaffold_1303_5 dataset_4924 scaffold_1303 5 1771 2469 1 C K02863 large subunit ribosomal protein L1 Ribosomal protein L1p/L10e family [PF00687.24] 0 +dataset_4924_scaffold_1303_6 dataset_4924 scaffold_1303 6 2796 3353 1 C K02864 large subunit ribosomal protein L10 Ribosomal protein L10 [PF00466.23] 0 +dataset_4924_scaffold_1303_7 dataset_4924 scaffold_1303 7 3429 3809 1 C K02935 large subunit ribosomal protein L7/L12 Ribosomal protein L7/L12 C-terminal domain [PF00542.22]; Ribosomal protein L7/L12 dimerisation domain [PF16320.8] 0 +dataset_4924_scaffold_1303_8 dataset_4924 scaffold_1303 8 3829 4026 -1 E 0 +dataset_4924_scaffold_1303_9 dataset_4924 scaffold_1303 9 4141 7638 1 C K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] MER0195833 N11 MER0195833 - family N11 unassigned peptide lyases () [N11.UPW]#N11#{peptidase unit: 944-1048}~source YP_003970177~ False 0.379 64.0 1.017e-08 RNA polymerase Rpb2, domain 6 [PF00562.31]; RNA polymerase beta subunit [PF04563.18]; RNA polymerase Rpb2, domain 2 [PF04561.17]; RNA polymerase Rpb2, domain 3 [PF04565.19]; RNA polymerase beta subunit external 1 domain [PF10385.12]; RNA polymerase Rpb2, domain 7 [PF04560.23] 0 +dataset_4924_scaffold_1303_10 dataset_4924 scaffold_1303 10 7671 11147 1 C K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] RNA polymerase Rpb1, domain 5 [PF04998.20]; RNA polymerase Rpb1, domain 1 [PF04997.15]; RNA polymerase Rpb1, domain 2 [PF00623.23]; RNA polymerase Rpb1, domain 3 [PF04983.21]; RNA polymerase Rpb1, domain 4 [PF05000.20] 0 +dataset_4924_scaffold_1303_11 dataset_4924 scaffold_1303 11 11322 11573 1 C K07590 large subunit ribosomal protein L7A Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.29] 0 +dataset_4924_scaffold_1303_12 dataset_4924 scaffold_1303 12 11627 12001 1 C K02950 small subunit ribosomal protein S12 Ribosomal protein S12/S23 [PF00164.28]; Ribosomal protein S7p/S5e [PF00177.24] 0 +dataset_4924_scaffold_1303_13 dataset_4924 scaffold_1303 13 12051 12521 1 C K02992 small subunit ribosomal protein S7 Ribosomal protein S7p/S5e [PF00177.24] 0 +dataset_4924_scaffold_1303_14 dataset_4924 scaffold_1303 14 12521 14617 1 C K02355 elongation factor G Elongation factor G, domain IV [PF03764.21]; Elongation factor Tu GTP binding domain [PF00009.30]; Elongation Factor G, domain III [PF14492.9]; Elongation factor G C-terminus [PF00679.27]; Elongation factor Tu domain 2 [PF03144.28] 0 +dataset_4924_scaffold_1510_1 dataset_4924 scaffold_1510 1 478 1935 1 D Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; PAS fold [PF08448.13]; PAS domain [PF13426.10]; PAS fold [PF00989.28] 0 +dataset_4924_scaffold_1510_2 dataset_4924 scaffold_1510 2 2271 3857 1 D AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] 0 +dataset_4924_scaffold_1510_3 dataset_4924 scaffold_1510 3 4217 5395 1 D 2-hydroxyglutaryl-CoA dehydratase, D-component [PF06050.16] 0 +dataset_4924_scaffold_1510_4 dataset_4924 scaffold_1510 4 5385 6587 1 D 2-hydroxyglutaryl-CoA dehydratase, D-component [PF06050.16] 0 +dataset_4924_scaffold_1510_5 dataset_4924 scaffold_1510 5 6684 8315 1 C K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg [PF01855.22]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.24] 0 +dataset_4924_scaffold_1510_6 dataset_4924 scaffold_1510 6 8453 9043 1 C K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] Pyruvate ferredoxin/flavodoxin oxidoreductase [PF01558.21] 0 +dataset_4924_scaffold_1510_7 dataset_4924 scaffold_1510 7 9217 9381 1 E 0 +dataset_4924_scaffold_1510_8 dataset_4924 scaffold_1510 8 9671 10636 -1 D Putative transposase, YhgA-like [PF04754.15] 0 +dataset_4924_scaffold_1510_9 dataset_4924 scaffold_1510 9 10802 11086 1 E 0 +dataset_4924_scaffold_1510_10 dataset_4924 scaffold_1510 10 11386 11451 1 C K03666 host factor-I protein 0 +dataset_4924_scaffold_1614_1 dataset_4924 scaffold_1614 1 178 1227 1 C K16178 dimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.249] Dimethylamine methyltransferase (Dimeth_PyL) [PF09505.13] 0 +dataset_4924_scaffold_1614_2 dataset_4924 scaffold_1614 2 1252 1563 1 D Dimethylamine methyltransferase (Dimeth_PyL) [PF09505.13] 0 +dataset_4924_scaffold_1614_3 dataset_4924 scaffold_1614 3 1599 2246 1 D B12 binding domain [PF02310.22]; B12 binding domain [PF02607.20] 0 +dataset_4924_scaffold_1614_4 dataset_4924 scaffold_1614 4 2508 2681 1 D Aldehyde ferredoxin oxidoreductase, N-terminal domain [PF02730.18] 0 +dataset_4924_scaffold_1614_5 dataset_4924 scaffold_1614 5 2718 3185 1 D Aldehyde ferredoxin oxidoreductase, N-terminal domain [PF02730.18] 0 +dataset_4924_scaffold_1614_6 dataset_4924 scaffold_1614 6 3981 5282 1 C K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] Aminotransferase class-III [PF00202.24] 0 +dataset_4924_scaffold_1614_7 dataset_4924 scaffold_1614 7 5460 8117 1 C K07469 aldehyde oxidoreductase [EC:1.2.99.7] Molybdopterin cofactor-binding domain [PF02738.21]; Molybdopterin cofactor-binding domain [PF20256.1]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.25]; [2Fe-2S] binding domain [PF01799.23]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.30]; 2Fe-2S iron-sulfur cluster binding domain [PF13085.9] 0 +dataset_4924_scaffold_1614_8 dataset_4924 scaffold_1614 8 8110 8433 1 D DsrC like protein [PF04358.16] 0 +dataset_4924_scaffold_1614_9 dataset_4924 scaffold_1614 9 8495 9652 1 D Aminotransferase class-V [PF00266.22]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.20]; Cys/Met metabolism PLP-dependent enzyme [PF01053.23]; Aminotransferase class I and II [PF00155.24]; Orn/Lys/Arg decarboxylase, major domain [PF01276.23]; Methionine gamma-lyase [PF06838.14] 0 +dataset_4924_scaffold_1614_10 dataset_4924 scaffold_1614 10 9668 10051 1 D Aminotransferase class-III [PF00202.24] 0 +dataset_4924_scaffold_1649_1 dataset_4924 scaffold_1649 1 233 4972 -1 C K02230 cobaltochelatase CobN [EC:6.6.1.2] CobN/Magnesium Chelatase [PF02514.19] 0 +dataset_4924_scaffold_1649_2 dataset_4924 scaffold_1649 2 4992 5339 -1 D Uncharacterized conserved protein (DUF2149) [PF09919.12] 0 +dataset_4924_scaffold_1649_3 dataset_4924 scaffold_1649 3 5290 5979 -1 D MotA/TolQ/ExbB proton channel family [PF01618.19] 0 +dataset_4924_scaffold_1649_4 dataset_4924 scaffold_1649 4 5976 6719 -1 D Predicted transporter (DUF2162) [PF09930.12] 0 +dataset_4924_scaffold_1649_5 dataset_4924 scaffold_1649 5 7875 8453 -1 E 0 +dataset_4924_scaffold_1814_1 dataset_4924 scaffold_1814 1 351 605 -1 C K06421 small acid-soluble spore protein D (minor alpha/beta-type SASP) Small, acid-soluble spore proteins, alpha/beta type [PF00269.23] 0 +dataset_4924_scaffold_1814_2 dataset_4924 scaffold_1814 2 1612 2100 -1 C K19710 ATP adenylyltransferase [EC:2.7.7.53] HIT domain [PF01230.26]; Scavenger mRNA decapping enzyme C-term binding [PF11969.11] 0 +dataset_4924_scaffold_1814_3 dataset_4924 scaffold_1814 3 2180 2860 -1 E 0 +dataset_4924_scaffold_1814_4 dataset_4924 scaffold_1814 4 3074 3262 -1 D 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10]; 4Fe-4S single cluster domain [PF13459.9]; 4Fe-4S dicluster domain [PF13247.9]; 4Fe-4S double cluster binding domain [PF13484.9]; 4Fe-4S binding domain [PF12837.10]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S single cluster domain of Ferredoxin I [PF13370.9]; 4Fe-4S dicluster domain [PF13534.9]; 4Fe-4S binding domain [PF12797.10]; 4Fe-4S binding domain [PF00037.30] 0 +dataset_4924_scaffold_1814_5 dataset_4924 scaffold_1814 5 3537 4058 -1 D Family of unknown function (DUF6125) [PF19620.2] 0 +dataset_4924_scaffold_1814_6 dataset_4924 scaffold_1814 6 4234 5061 -1 C K06940 uncharacterized protein Putative zinc- or iron-chelating domain [PF03692.18] 0 +dataset_4924_scaffold_1814_7 dataset_4924 scaffold_1814 7 5381 5584 -1 E 0 +dataset_4924_scaffold_1814_8 dataset_4924 scaffold_1814 8 5878 7572 -1 C K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] 0 +dataset_4924_scaffold_1852_1 dataset_4924 scaffold_1852 1 714 1238 -1 C K03406 methyl-accepting chemotaxis protein MER0501642 M23B MER0501642 - subfamily M23B unassigned peptidases (Clostridium saccharobutylicum) [M23.UPB]#M23B#{peptidase unit: 361-556}~source YP_008673405~ False 0.406 66.0 1.921e-11 Methyl-accepting chemotaxis protein (MCP) signalling domain [PF00015.24] 0 +dataset_4924_scaffold_1852_2 dataset_4924 scaffold_1852 2 1446 5231 1 D SNF2-related domain [PF00176.26]; SNF2 Helicase protein [PF12419.11]; Helicase conserved C-terminal domain [PF00271.34]; Type III restriction enzyme, res subunit [PF04851.18] 0 +dataset_4924_scaffold_1852_3 dataset_4924 scaffold_1852 3 5346 5879 1 C K07076 uncharacterized protein Polymerase beta, Nucleotidyltransferase [PF18765.4]; Nucleotidyltransferase domain [PF01909.26] 0 +dataset_4924_scaffold_1852_4 dataset_4924 scaffold_1852 4 5876 6289 1 D HEPN domain [PF05168.17] 0 +dataset_4924_scaffold_1852_5 dataset_4924 scaffold_1852 5 6480 6767 -1 D Uracil DNA glycosylase superfamily [PF03167.22] 0 +dataset_4924_scaffold_1852_6 dataset_4924 scaffold_1852 6 7023 7361 -1 E 0 +dataset_4924_scaffold_1852_7 dataset_4924 scaffold_1852 7 7358 7471 -1 D Bacteriophage holin family [PF05105.15] 0 +dataset_4924_scaffold_2104_1 dataset_4924 scaffold_2104 1 114 698 1 C K06206 sugar fermentation stimulation protein A Sugar fermentation stimulation protein RE domain [PF03749.16]; SfsA N-terminal OB domain [PF17746.4] 0 +dataset_4924_scaffold_2104_2 dataset_4924 scaffold_2104 2 927 1220 1 E 0 +dataset_4924_scaffold_2104_3 dataset_4924 scaffold_2104 3 1315 2508 1 D Domain of unknown function (DUF362) [PF04015.15]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10] 1 +dataset_4924_scaffold_2104_4 dataset_4924 scaffold_2104 4 2668 3366 -1 D SNARE associated Golgi protein [PF09335.14] 0 +dataset_4924_scaffold_2104_5 dataset_4924 scaffold_2104 5 3739 5103 1 C K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] tRNA (Uracil-5-)-methyltransferase [PF05958.14]; TRAM domain [PF01938.23] 0 +dataset_4924_scaffold_2104_6 dataset_4924 scaffold_2104 6 5276 5467 1 E 0 +dataset_4924_scaffold_2153_1 dataset_4924 scaffold_2153 1 2 76 1 E 0 +dataset_4924_scaffold_2153_2 dataset_4924 scaffold_2153 2 621 5108 1 C K03388 heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.9]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.17]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10]; NAD(P)-binding Rossmann-like domain [PF13450.9]; 4Fe-4S dicluster domain [PF13247.9]; FAD binding domain [PF01494.22] 0 +dataset_4924_scaffold_260_1 dataset_4924 scaffold_260 1 349 765 -1 D FAD linked oxidases, C-terminal domain [PF02913.22] 0 +dataset_4924_scaffold_260_2 dataset_4924 scaffold_260 2 834 1499 1 C K09017 TetR/AcrR family transcriptional regulator Tetracyclin repressor-like, C-terminal domain [PF17938.4]; Bacterial regulatory proteins, tetR family [PF00440.26]; YsiA-like protein, C-terminal region [PF08359.14] 0 +dataset_4924_scaffold_260_3 dataset_4924 scaffold_260 3 1600 2667 1 D Barrel-sandwich domain of CusB or HlyD membrane-fusion [PF16576.8]; Cation efflux system protein CusB domain 1 [PF00529.23]; HlyD family secretion protein [PF13437.9] 0 +dataset_4924_scaffold_260_4 dataset_4924 scaffold_260 4 2670 3377 1 D ABC transporter [PF00005.30] 0 +dataset_4924_scaffold_260_5 dataset_4924 scaffold_260 5 3370 4524 1 D ABC-2 family transporter protein [PF12698.10]; ABC-2 type transporter [PF01061.27] 0 +dataset_4924_scaffold_260_6 dataset_4924 scaffold_260 6 4537 5739 1 D ABC-2 family transporter protein [PF12698.10]; ABC-2 type transporter [PF01061.27] 0 +dataset_4924_scaffold_260_7 dataset_4924 scaffold_260 7 5991 6776 1 C K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Phosphorylase superfamily [PF01048.23] 0 +dataset_4924_scaffold_260_8 dataset_4924 scaffold_260 8 6826 7860 1 C K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Initiation factor 2 subunit family [PF01008.20] 0 +dataset_4924_scaffold_260_9 dataset_4924 scaffold_260 9 8022 9275 1 C K01251 adenosylhomocysteinase [EC:3.3.1.1] S-adenosyl-L-homocysteine hydrolase, NAD binding domain [PF00670.24]; S-adenosyl-L-homocysteine hydrolase [PF05221.20]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.22]; Acetohydroxy acid isomeroreductase, NADPH-binding domain [PF07991.15] 0 +dataset_4924_scaffold_260_10 dataset_4924 scaffold_260 10 9425 10102 1 C K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Class II Aldolase and Adducin N-terminal domain [PF00596.24] 0 +dataset_4924_scaffold_260_11 dataset_4924 scaffold_260 11 10160 11485 1 C K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] MER0093866 M38 MER0093866 - family M38 non-peptidase homologues (Pelotomaculum thermopropionicum) [M38.UNW]#M38#{peptidase unit: 24-368}~source YP_001212278~ True 0.668 460.0 1.404e-142 Amidohydrolase family [PF01979.23]; Amidohydrolase family [PF07969.14] 0 +dataset_4924_scaffold_260_12 dataset_4924 scaffold_260 12 11838 13751 -1 C K00198 anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] Prismane/CO dehydrogenase family [PF03063.23] 0 +dataset_4924_scaffold_260_13 dataset_4924 scaffold_260 13 14000 14422 1 D Polymerase beta, Nucleotidyltransferase [PF18765.4] 0 +dataset_4924_scaffold_260_14 dataset_4924 scaffold_260 14 14415 14837 1 D Ribonuclease HepT-like [PF01934.20] 0 +dataset_4924_scaffold_260_15 dataset_4924 scaffold_260 15 14965 15222 -1 D Zinc ribbon domain [PF09723.13] 0 +dataset_4924_scaffold_260_16 dataset_4924 scaffold_260 16 15341 16756 -1 C K09251 putrescine aminotransferase [EC:2.6.1.82] Aminotransferase class-III [PF00202.24] 0 +dataset_4924_scaffold_260_17 dataset_4924 scaffold_260 17 17086 17418 1 C K09787 uncharacterized protein Putative helix-turn-helix protein, YlxM / p13 like [PF04297.17]; Sigma-70, region 4 [PF04545.19]; Helix-turn-helix of insertion element transposase [PF13022.9]; HTH DNA binding domain [PF04967.15]; Sigma-70, region 4 [PF08281.15] 0 +dataset_4924_scaffold_260_18 dataset_4924 scaffold_260 18 17423 18787 1 C K03106 signal recognition particle subunit SRP54 [EC:3.6.5.4] SRP54-type protein, GTPase domain [PF00448.25]; Signal peptide binding domain [PF02978.22]; SRP54-type protein, helical bundle domain [PF02881.22]; VirC1 protein [PF07015.14] 0 +dataset_4924_scaffold_260_19 dataset_4924 scaffold_260 19 18825 19094 1 C K02959 small subunit ribosomal protein S16 Ribosomal protein S16 [PF00886.22] 0 +dataset_4924_scaffold_260_20 dataset_4924 scaffold_260 20 19124 19351 1 C K06960 uncharacterized protein KH domain [PF13083.9] 0 +dataset_4924_scaffold_260_21 dataset_4924 scaffold_260 21 19532 20095 1 C K02860 16S rRNA processing protein RimM RimM N-terminal domain [PF01782.21] 0 +dataset_4924_scaffold_260_22 dataset_4924 scaffold_260 22 20092 20847 1 C K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] tRNA (Guanine-1)-methyltransferase [PF01746.24] 0 +dataset_4924_scaffold_260_23 dataset_4924 scaffold_260 23 20877 21221 -1 D MER0231319 M23B MER0231319 - subfamily M23B non-peptidase homologues (Thermaerobacter marianensis) [M23.UNB]#M23B#{peptidase unit: 70-183}~source YP_004101378~ False 0.445 93.0 1.68e-21 LysM domain [PF01476.23] CBM50 CBM50 Modules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below. 0 +dataset_4924_scaffold_260_24 dataset_4924 scaffold_260 24 21444 22538 1 C K06385 stage II sporulation protein P Stage II sporulation protein P (SpoIIP) [PF07454.14] 0 +dataset_4924_scaffold_260_25 dataset_4924 scaffold_260 25 22672 23016 1 C K02884 large subunit ribosomal protein L19 Ribosomal protein L19 [PF01245.23] 0 +dataset_4924_scaffold_260_26 dataset_4924 scaffold_260 26 23109 23660 1 C K03100 signal peptidase I [EC:3.4.21.89] MER0248175 S26A MER0248175 - signal peptidase ({Mycobacterium tuberculosis}-type) (Desulfotomaculum kuznetsovii) [S26.024]#S26A#{peptidase unit: 42-186}~source YP_004517483~ False 0.766 228.0 3.4389999999999997e-67 Signal peptidase, peptidase S26 [PF10502.12] 0 +dataset_4924_scaffold_260_27 dataset_4924 scaffold_260 27 23901 24749 1 C K14540 ribosome biogenesis GTPase A RsgA GTPase [PF03193.19]; 50S ribosome-binding GTPase [PF01926.26]; Ferrous iron transport protein B [PF02421.21]; MnmE helical domain [PF12631.10] 0 +dataset_4924_scaffold_260_28 dataset_4924 scaffold_260 28 24845 25636 1 C K03470 ribonuclease HII [EC:3.1.26.4] Ribonuclease HII [PF01351.21] 0 +dataset_4924_scaffold_260_29 dataset_4924 scaffold_260 29 25866 26219 1 C K00330 NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 [PF00507.22] 0 +dataset_4924_scaffold_260_30 dataset_4924 scaffold_260 30 26210 26800 1 D NADH ubiquinone oxidoreductase, 20 Kd subunit [PF01058.25] 0 +dataset_4924_scaffold_260_31 dataset_4924 scaffold_260 31 26802 27248 1 D Respiratory-chain NADH dehydrogenase, 30 Kd subunit [PF00329.22] 0 +dataset_4924_scaffold_260_32 dataset_4924 scaffold_260 32 27252 28355 1 C K00333 NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] Respiratory-chain NADH dehydrogenase, 49 Kd subunit [PF00346.22] 0 +dataset_4924_scaffold_260_33 dataset_4924 scaffold_260 33 28384 29430 1 C K00337 NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] NADH dehydrogenase [PF00146.24] 0 +dataset_4924_scaffold_260_34 dataset_4924 scaffold_260 34 29435 29965 1 D 4Fe-4S dicluster domain [PF12838.10]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S dicluster domain [PF13247.9]; 4Fe-4S double cluster binding domain [PF13484.9]; 4Fe-4S dicluster domain [PF13534.9]; 4Fe-4S dicluster domain [PF13746.9] 0 +dataset_4924_scaffold_260_35 dataset_4924 scaffold_260 35 29969 30523 1 C K00339 NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [PF00499.23] 0 +dataset_4924_scaffold_260_36 dataset_4924 scaffold_260 36 30510 30824 1 C K00340 NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] NADH-ubiquinone/plastoquinone oxidoreductase chain 4L [PF00420.27] 0 +dataset_4924_scaffold_260_37 dataset_4924 scaffold_260 37 30858 32792 1 C K00341 NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] Proton-conducting membrane transporter [PF00361.23]; NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus [PF01010.22]; NADH dehydrogenase subunit 5 C-terminus [PF06455.14]; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus [PF00662.23] 0 +dataset_4924_scaffold_260_38 dataset_4924 scaffold_260 38 32792 34312 1 D Proton-conducting membrane transporter [PF00361.23]; NADH-ubiquinone oxidoreductase chain 4, amino terminus [PF01059.20] 0 +dataset_4924_scaffold_260_39 dataset_4924 scaffold_260 39 34313 35767 1 C K00343 NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] Proton-conducting membrane transporter [PF00361.23] 0 +dataset_4924_scaffold_260_40 dataset_4924 scaffold_260 40 35879 36757 1 D AAA domain (dynein-related subfamily) [PF07728.17]; ATPase family associated with various cellular activities (AAA) [PF00004.32]; Sigma-54 interaction domain [PF14532.9]; GvpD gas vesicle protein, P-loop domain [PF07088.14] 0 +dataset_4924_scaffold_260_41 dataset_4924 scaffold_260 41 36762 37958 1 C K09989 uncharacterized protein VWA domain containing CoxE-like protein [PF05762.17] 0 +dataset_4924_scaffold_260_42 dataset_4924 scaffold_260 42 38087 38539 1 D Putative redox-active protein (C_GCAxxG_C_C) [PF09719.13] 0 +dataset_4924_scaffold_260_43 dataset_4924 scaffold_260 43 38549 38902 1 C K07460 putative endonuclease Uncharacterised protein family UPF0102 [PF02021.20] 0 +dataset_4924_scaffold_260_44 dataset_4924 scaffold_260 44 39518 39916 -1 E 0 +dataset_4924_scaffold_260_45 dataset_4924 scaffold_260 45 40034 40315 -1 C K01512 acylphosphatase [EC:3.6.1.7] Acylphosphatase [PF00708.21] 0 +dataset_4924_scaffold_260_46 dataset_4924 scaffold_260 46 40667 42208 1 C K07391 magnesium chelatase family protein MER0248133 S16 MER0248133 - family S16 non-peptidase homologues (Desulfotomaculum kuznetsovii) [S16.UNW]#S16#{peptidase unit: 5-416}~source YP_004517462~ True 0.664 544.0 3.491e-170 Magnesium chelatase, subunit ChlI [PF01078.24]; Subunit ChlI of Mg-chelatase [PF13541.9]; Magnesium chelatase, subunit ChlI C-terminal [PF13335.9]; Sigma-54 interaction domain [PF00158.29]; AAA domain (dynein-related subfamily) [PF07728.17]; AAA domain (Cdc48 subfamily) [PF07724.17] 0 +dataset_4924_scaffold_260_47 dataset_4924 scaffold_260 47 42255 43862 -1 C K02837 peptide chain release factor 3 Class II release factor RF3, C-terminal domain [PF16658.8]; Elongation factor Tu GTP binding domain [PF00009.30]; Elongation factor Tu domain 2 [PF03144.28] 0 +dataset_4924_scaffold_260_48 dataset_4924 scaffold_260 48 43989 44666 -1 D Response regulator receiver domain [PF00072.27]; Bacterial regulatory proteins, luxR family [PF00196.22] 0 +dataset_4924_scaffold_260_49 dataset_4924 scaffold_260 49 45569 46348 1 C K01715 enoyl-CoA hydratase [EC:4.2.1.17] MER1073240 S49C MER1073240 - subfamily S49C non-peptidase homologues (Acinetobacter bohemicus) [S49.UNC]#S49C#{peptidase unit: 84-212}~source N8Q6E4~ False 0.472 110.0 2.851e-25 Enoyl-CoA hydratase/isomerase [PF00378.23]; Enoyl-CoA hydratase/isomerase [PF16113.8] 0 +dataset_4924_scaffold_260_50 dataset_4924 scaffold_260 50 46403 48157 1 D Acyl-CoA dehydrogenase, C-terminal domain [PF00441.27]; Acyl-CoA dehydrogenase, middle domain [PF02770.22]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.19] 0 +dataset_4924_scaffold_260_51 dataset_4924 scaffold_260 51 48259 49452 1 D Thiolase, N-terminal domain [PF00108.26]; Thiolase, C-terminal domain [PF02803.21] 0 +dataset_4924_scaffold_260_52 dataset_4924 scaffold_260 52 49484 49606 -1 E 0 +dataset_4924_scaffold_260_53 dataset_4924 scaffold_260 53 49797 50657 1 C K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.21]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.25] 0 +dataset_4924_scaffold_260_54 dataset_4924 scaffold_260 54 50849 52360 1 C K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] 0 +dataset_4924_scaffold_260_55 dataset_4924 scaffold_260 55 52489 52800 -1 E 0 +dataset_4924_scaffold_260_56 dataset_4924 scaffold_260 56 53067 53363 1 D Probable zinc-ribbon domain [PF13451.9] 0 +dataset_4924_scaffold_260_57 dataset_4924 scaffold_260 57 53503 55527 1 C K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] NADH:flavin oxidoreductase / NADH oxidase family [PF00724.23]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.17]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.30]; HI0933-like protein [PF03486.17]; NAD(P)-binding Rossmann-like domain [PF13450.9]; FAD binding domain [PF01494.22]; FAD dependent oxidoreductase [PF01266.27] 0 +dataset_4924_scaffold_260_58 dataset_4924 scaffold_260 58 55750 57189 1 C K11105 potassium/hydrogen antiporter Sodium/hydrogen exchanger family [PF00999.24]; TrkA-C domain [PF02080.24] 0 +dataset_4924_scaffold_260_59 dataset_4924 scaffold_260 59 57235 58353 -1 D MFS_1 like family [PF12832.10]; Major Facilitator Superfamily [PF07690.19] 0 +dataset_4924_scaffold_260_60 dataset_4924 scaffold_260 60 58454 58750 -1 E 0 +dataset_4924_scaffold_260_61 dataset_4924 scaffold_260 61 59260 60465 1 C K03547 DNA repair protein SbcD/Mre11 Type 5 capsule protein repressor C-terminal domain [PF12320.11]; Calcineurin-like phosphoesterase [PF00149.31]; Calcineurin-like phosphoesterase superfamily domain [PF12850.10] 0 +dataset_4924_scaffold_260_62 dataset_4924 scaffold_260 62 60462 63530 1 C K03546 DNA repair protein SbcC/Rad50 AAA domain [PF13476.9]; SbcC/RAD50-like, Walker B motif [PF13558.9]; P-loop containing region of AAA domain [PF13555.9]; AAA domain [PF13514.9]; RecF/RecN/SMC N terminal domain [PF02463.22] 0 +dataset_4924_scaffold_260_63 dataset_4924 scaffold_260 63 63665 65035 1 C K00104 glycolate oxidase [EC:1.1.3.15] FAD linked oxidases, C-terminal domain [PF02913.22]; FAD binding domain [PF01565.26] AA4; AA7 AA4 vanillyl-alcohol oxidase (EC 1.1.3.38); AA7 glucooligosaccharide oxidase (EC 1.1.3.-); chitooligosaccharide oxidase (EC 1.1.3.-); cellooligosaccharide dehydrogenase (EC 1.1.99.-) 0 +dataset_4924_scaffold_260_64 dataset_4924 scaffold_260 64 65255 66586 1 C K11473 glycolate oxidase iron-sulfur subunit Cysteine-rich domain [PF02754.19]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S dicluster domain [PF13534.9]; 4Fe-4S dicluster domain [PF13187.9] 0 +dataset_4924_scaffold_260_65 dataset_4924 scaffold_260 65 66709 69459 1 C K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] RecJ OB domain [PF17768.4]; DHHA1 domain [PF02272.22]; DHH family [PF01368.23] 0 +dataset_4924_scaffold_260_66 dataset_4924 scaffold_260 66 69463 71640 1 C K01139 GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] HD domain [PF13328.9]; RelA/SpoT, AH and RIS domains [PF19296.2]; Region found in RelA / SpoT proteins [PF04607.20]; TGS domain [PF02824.24]; ACT domain [PF13291.9] 0 +dataset_4924_scaffold_260_67 dataset_4924 scaffold_260 67 71794 72408 1 C K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Metallo-beta-lactamase superfamily [PF00753.30]; Beta-lactamase superfamily domain [PF12706.10] 0 +dataset_4924_scaffold_260_68 dataset_4924 scaffold_260 68 72575 73192 1 C K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Metallo-beta-lactamase superfamily [PF00753.30]; Metallo-beta-lactamase superfamily [PF14597.9]; Beta-lactamase superfamily domain [PF12706.10] 0 +dataset_4924_scaffold_260_69 dataset_4924 scaffold_260 69 73556 75247 1 D AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] 0 +dataset_4924_scaffold_260_70 dataset_4924 scaffold_260 70 75265 75471 -1 D Bacterial protein of unknown function (DUF896) [PF05979.15] 0 +dataset_4924_scaffold_260_71 dataset_4924 scaffold_260 71 75791 77041 1 C K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Histidyl-tRNA synthetase [PF13393.9]; Anticodon binding domain [PF03129.23] 0 +dataset_4924_scaffold_260_72 dataset_4924 scaffold_260 72 77295 79094 1 C K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] tRNA synthetases class II (D, K and N) [PF00152.23]; GAD domain [PF02938.17]; OB-fold nucleic acid binding domain [PF01336.28] 0 +dataset_4924_scaffold_260_73 dataset_4924 scaffold_260 73 79612 80403 1 C K22132 tRNA threonylcarbamoyladenosine dehydratase ThiF family [PF00899.24] 0 +dataset_4924_scaffold_273_1 dataset_4924 scaffold_273 1 3 305 1 E 0 +dataset_4924_scaffold_273_2 dataset_4924 scaffold_273 2 597 1067 1 E 0 +dataset_4924_scaffold_273_3 dataset_4924 scaffold_273 3 1405 1758 -1 E 0 +dataset_4924_scaffold_273_4 dataset_4924 scaffold_273 4 2463 2744 -1 E 0 +dataset_4924_scaffold_273_5 dataset_4924 scaffold_273 5 3054 3485 1 D Protein of unknown function (DUF1232) [PF06803.15] 0 +dataset_4924_scaffold_273_6 dataset_4924 scaffold_273 6 3655 4542 1 C K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] RNA pseudouridylate synthase [PF00849.25] 0 +dataset_4924_scaffold_273_7 dataset_4924 scaffold_273 7 4573 6204 -1 C K07282 gamma-polyglutamate biosynthesis protein CapA Bacterial capsule synthesis protein PGA_cap [PF09587.13] 0 +dataset_4924_scaffold_273_8 dataset_4924 scaffold_273 8 6201 8360 -1 D Protein of unknown function (DUF3160) [PF11369.11] 0 +dataset_4924_scaffold_273_9 dataset_4924 scaffold_273 9 8711 9400 -1 E 0 +dataset_4924_scaffold_273_10 dataset_4924 scaffold_273 10 9849 10364 1 C K03088 RNA polymerase sigma-70 factor, ECF subfamily Sigma-70, region 4 [PF08281.15]; Sigma-70 region 2 [PF04542.17]; Sigma-70, region 4 [PF04545.19] 0 +dataset_4924_scaffold_273_11 dataset_4924 scaffold_273 11 10357 11829 1 D Putative zinc-finger [PF13490.9] 0 +dataset_4924_scaffold_273_12 dataset_4924 scaffold_273 12 11860 12351 1 D Sigma-70, region 4 [PF08281.15] 0 +dataset_4924_scaffold_273_13 dataset_4924 scaffold_273 13 12380 12574 1 E 0 +dataset_4924_scaffold_273_14 dataset_4924 scaffold_273 14 12797 13873 -1 C K06949 ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] RsgA GTPase [PF03193.19]; 50S ribosome-binding GTPase [PF01926.26]; Dynamin family [PF00350.26] 0 +dataset_4924_scaffold_273_15 dataset_4924 scaffold_273 15 14389 15807 1 D Amino acid permease [PF00324.24]; Amino acid permease [PF13520.9]; Spore germination protein [PF03845.16] 0 +dataset_4924_scaffold_273_16 dataset_4924 scaffold_273 16 16218 16823 1 D Thiopurine S-methyltransferase (TPMT) [PF05724.14]; Tellurite resistance protein TehB [PF03848.17]; Methyltransferase domain [PF13649.9]; Methyltransferase domain [PF13847.9]; Methyltransferase domain [PF08241.15]; Methyltransferase domain [PF13489.9]; Methyltransferase domain [PF08242.15]; mRNA capping enzyme [PF03291.19] 0 +dataset_4924_scaffold_273_17 dataset_4924 scaffold_273 17 17540 18454 1 D 4Fe-4S dicluster domain [PF13746.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10]; 4Fe-4S dicluster domain [PF14697.9]; Flavodoxin domain [PF12724.10]; 4Fe-4S dicluster domain [PF13247.9] 0 +dataset_4924_scaffold_273_18 dataset_4924 scaffold_273 18 18657 20057 1 C K00764 amidophosphoribosyltransferase [EC:2.4.2.14] MER0162263 C44 MER0162263 - family C44 non-peptidase homologues (Anaerostipes caccae) [C44.UNW]#C44#{peptidase unit: 2-233}~source ZP_02419643~ False 0.626 287.0 1.467e-82 Glutamine amidotransferase domain [PF13537.9] 0 +dataset_4924_scaffold_273_19 dataset_4924 scaffold_273 19 20314 21006 -1 C K07755 arsenite methyltransferase [EC:2.1.1.137] ubiE/COQ5 methyltransferase family [PF01209.21]; Methyltransferase domain [PF08241.15]; Methyltransferase domain [PF13847.9]; Methyltransferase domain [PF13649.9]; Methyltransferase domain [PF13489.9]; Mycolic acid cyclopropane synthetase [PF02353.23]; Methyltransferase domain [PF08242.15]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.22]; Methionine biosynthesis protein MetW [PF07021.15]; Tellurite resistance protein TehB [PF03848.17]; Protein of unknown function (DUF1698) [PF08003.14]; tRNA methyltransferase complex GCD14 subunit [PF08704.13]; Methyltransferase small domain [PF05175.17]; Thiopurine S-methyltransferase (TPMT) [PF05724.14]; Putative RNA methylase family UPF0020 [PF01170.21]; Putative methyltransferase [PF02390.20]; 16S rRNA methyltransferase RsmB/F [PF01189.20]; tRNA (Uracil-5-)-methyltransferase [PF05958.14]; Nodulation protein S (NodS) [PF05401.14]; DREV methyltransferase [PF05219.15]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.16]; FtsJ-like methyltransferase [PF01728.22]; Ribosomal RNA adenine dimethylase [PF00398.23]; Hypothetical methyltransferase [PF05148.18]; N-6 DNA Methylase [PF02384.19] 0 +dataset_4924_scaffold_273_20 dataset_4924 scaffold_273 20 21113 22747 -1 C K03644 lipoyl synthase [EC:2.8.1.8] 0 +dataset_4924_scaffold_273_21 dataset_4924 scaffold_273 21 22744 24339 -1 C K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] 2-oxoacid dehydrogenases acyltransferase (catalytic domain) [PF00198.26]; Biotin-requiring enzyme [PF00364.25]; Carboxymuconolactone decarboxylase family [PF02627.23]; e3 binding domain [PF02817.20] 0 +dataset_4924_scaffold_273_22 dataset_4924 scaffold_273 22 24341 25363 -1 D ATP-NAD kinase N-terminal domain [PF01513.24] 0 +dataset_4924_scaffold_273_23 dataset_4924 scaffold_273 23 25391 26362 -1 C K21417 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] Transketolase, pyrimidine binding domain [PF02779.27]; Transketolase, C-terminal domain [PF02780.23] 0 +dataset_4924_scaffold_273_24 dataset_4924 scaffold_273 24 26401 27363 -1 C K21416 acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] Dehydrogenase E1 component [PF00676.23]; Transketolase, thiamine diphosphate binding domain [PF00456.24]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.24] 0 +dataset_4924_scaffold_273_25 dataset_4924 scaffold_273 25 27718 29823 -1 C K21405 sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; Bacterial regulatory protein, Fis family [PF02954.22]; PAS fold [PF00989.28]; PAS fold [PF08448.13] 0 +dataset_4924_scaffold_273_26 dataset_4924 scaffold_273 26 30311 30610 1 D Family of unknown function (DUF6506) [PF20116.2] 0 +dataset_4924_scaffold_273_27 dataset_4924 scaffold_273 27 30929 31714 -1 C K07090 uncharacterized protein Sulfite exporter TauE/SafE [PF01925.22] 0 +dataset_4924_scaffold_273_28 dataset_4924 scaffold_273 28 32247 34127 1 C K03406 methyl-accepting chemotaxis protein MER0501642 M23B MER0501642 - subfamily M23B unassigned peptidases (Clostridium saccharobutylicum) [M23.UPB]#M23B#{peptidase unit: 361-556}~source YP_008673405~ False 0.328 98.0 2.305e-19 Double sensory domain of two-component sensor kinase [PF14827.9]; Methyl-accepting chemotaxis protein (MCP) signalling domain [PF00015.24]; HAMP domain [PF00672.28] 0 +dataset_4924_scaffold_273_29 dataset_4924 scaffold_273 29 34415 36016 1 C K03406 methyl-accepting chemotaxis protein MER0501642 M23B MER0501642 - subfamily M23B unassigned peptidases (Clostridium saccharobutylicum) [M23.UPB]#M23B#{peptidase unit: 361-556}~source YP_008673405~ False 0.344 95.0 1.09e-18 Methyl-accepting chemotaxis protein (MCP) signalling domain [PF00015.24]; Four helix bundle sensory module for signal transduction [PF12729.10]; HAMP domain [PF00672.28] 0 +dataset_4924_scaffold_273_30 dataset_4924 scaffold_273 30 36338 36490 -1 D Spo0E like sporulation regulatory protein [PF09388.13] 0 +dataset_4924_scaffold_273_31 dataset_4924 scaffold_273 31 37056 39257 1 C K07012 CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] Type III restriction enzyme, res subunit [PF04851.18]; DEAD/DEAH box helicase [PF00270.32]; HD domain [PF18019.4] 0 +dataset_4924_scaffold_273_32 dataset_4924 scaffold_273 32 39276 39941 1 C K19119 CRISPR-associated protein Cas5d CRISPR-associated protein (Cas_Cas5) [PF09704.13] 0 +dataset_4924_scaffold_273_33 dataset_4924 scaffold_273 33 39938 41746 1 C K19117 CRISPR-associated protein Csd1 CRISPR-associated protein (Cas_Csd1) [PF09709.13] 0 +dataset_4924_scaffold_273_34 dataset_4924 scaffold_273 34 41746 42612 1 C K19118 CRISPR-associated protein Csd2 CRISPR-associated protein Cas7 [PF05107.15] 0 +dataset_4924_scaffold_273_35 dataset_4924 scaffold_273 35 42614 43273 1 C K07464 CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] Domain of unknown function DUF83 [PF01930.20] 0 +dataset_4924_scaffold_273_36 dataset_4924 scaffold_273 36 43289 44320 1 C K15342 CRISP-associated protein Cas1 CRISPR associated protein Cas1 [PF01867.19] 0 +dataset_4924_scaffold_273_37 dataset_4924 scaffold_273 37 44337 44624 1 C K09951 CRISPR-associated protein Cas2 CRISPR associated protein Cas2 [PF09827.12] 0 +dataset_4924_scaffold_273_38 dataset_4924 scaffold_273 38 44973 45491 -1 E 0 +dataset_4924_scaffold_273_39 dataset_4924 scaffold_273 39 45612 45953 1 E 0 +dataset_4924_scaffold_273_40 dataset_4924 scaffold_273 40 46506 47084 -1 E 0 +dataset_4924_scaffold_273_41 dataset_4924 scaffold_273 41 47776 48006 1 E 0 +dataset_4924_scaffold_273_42 dataset_4924 scaffold_273 42 49749 50273 -1 E 0 +dataset_4924_scaffold_273_43 dataset_4924 scaffold_273 43 50671 51063 -1 E 0 +dataset_4924_scaffold_273_44 dataset_4924 scaffold_273 44 51289 51429 1 E 0 +dataset_4924_scaffold_273_45 dataset_4924 scaffold_273 45 52720 53205 1 E 0 +dataset_4924_scaffold_273_46 dataset_4924 scaffold_273 46 53784 55166 1 C K02112 F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.28]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.26] 0 +dataset_4924_scaffold_273_47 dataset_4924 scaffold_273 47 55163 55558 1 D ATP synthase, Delta/Epsilon chain, beta-sandwich domain [PF02823.19] 0 +dataset_4924_scaffold_273_48 dataset_4924 scaffold_273 48 55551 55862 1 C K02116 ATP synthase protein I Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter [PF09527.13] 0 +dataset_4924_scaffold_273_49 dataset_4924 scaffold_273 49 56087 56413 1 D N-ATPase, AtpR subunit [PF12966.10] 0 +dataset_4924_scaffold_273_50 dataset_4924 scaffold_273 50 56397 57107 1 C K02108 F-type H+-transporting ATPase subunit a ATP synthase A chain [PF00119.23] 0 +dataset_4924_scaffold_273_51 dataset_4924 scaffold_273 51 57109 57387 1 C K02110 F-type H+-transporting ATPase subunit c ATP synthase subunit C [PF00137.24] 0 +dataset_4924_scaffold_273_52 dataset_4924 scaffold_273 52 57395 58186 1 C K02109 F-type H+-transporting ATPase subunit b ATP synthase B/B' CF(0) [PF00430.21] 0 +dataset_4924_scaffold_273_53 dataset_4924 scaffold_273 53 58195 59712 1 C K02111 F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.28]; ATP synthase alpha/beta chain, C terminal domain [PF00306.30]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.26]; Photosystem I psaA/psaB protein [PF00223.22] 0 +dataset_4924_scaffold_273_54 dataset_4924 scaffold_273 54 59714 60652 1 D ATP synthase [PF00231.22] 0 +dataset_4924_scaffold_273_55 dataset_4924 scaffold_273 55 60985 61260 1 E 0 +dataset_4924_scaffold_273_56 dataset_4924 scaffold_273 56 61326 62390 1 C K03325 arsenite transporter Sodium Bile acid symporter family [PF01758.19] 0 +dataset_4924_scaffold_273_57 dataset_4924 scaffold_273 57 62447 62815 1 C K03892 ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor Bacterial regulatory protein, arsR family [PF01022.23]; Helix-turn-helix domain [PF12840.10] 0 +dataset_4924_scaffold_273_58 dataset_4924 scaffold_273 58 62855 63571 1 D Calcineurin-like phosphoesterase superfamily domain [PF12850.10] 0 +dataset_4924_scaffold_273_59 dataset_4924 scaffold_273 59 63601 64545 1 C K07755 arsenite methyltransferase [EC:2.1.1.137] ubiE/COQ5 methyltransferase family [PF01209.21]; Methyltransferase domain [PF13847.9]; Methyltransferase domain [PF08241.15]; Methyltransferase domain [PF13649.9]; Methyltransferase domain [PF13489.9]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.22]; Mycolic acid cyclopropane synthetase [PF02353.23]; Methyltransferase domain [PF08242.15]; Methyltransferase small domain [PF05175.17]; Putative RNA methylase family UPF0020 [PF01170.21]; tRNA (Uracil-5-)-methyltransferase [PF05958.14]; Protein of unknown function (DUF1698) [PF08003.14]; RNA cap guanine-N2 methyltransferase [PF09445.13]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.16]; Tellurite resistance protein TehB [PF03848.17]; tRNA methyltransferase complex GCD14 subunit [PF08704.13] 0 +dataset_4924_scaffold_273_60 dataset_4924 scaffold_273 60 64747 64920 1 E 0 +dataset_4924_scaffold_273_61 dataset_4924 scaffold_273 61 65025 65168 1 E 0 +dataset_4924_scaffold_273_62 dataset_4924 scaffold_273 62 65181 66515 -1 C K03498 trk/ktr system potassium uptake protein Cation transport protein [PF02386.19] 0 +dataset_4924_scaffold_273_63 dataset_4924 scaffold_273 63 66643 67296 -1 C K03499 trk/ktr system potassium uptake protein TrkA-N domain [PF02254.21]; TrkA-C domain [PF02080.24]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.17] 0 +dataset_4924_scaffold_273_64 dataset_4924 scaffold_273 64 67724 67990 1 E 0 +dataset_4924_scaffold_273_65 dataset_4924 scaffold_273 65 68204 68878 -1 C K09125 queuosine precursor transporter Putative vitamin uptake transporter [PF02592.18] 0 +dataset_4924_scaffold_273_66 dataset_4924 scaffold_273 66 69173 70552 -1 C K00833 adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Aminotransferase class-III [PF00202.24] 0 +dataset_4924_scaffold_273_67 dataset_4924 scaffold_273 67 70575 71297 -1 C K01935 dethiobiotin synthetase [EC:6.3.3.3] AAA domain [PF13500.9] 0 +dataset_4924_scaffold_273_68 dataset_4924 scaffold_273 68 71440 72606 -1 C K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47] MER0501945 U32 MER0501945 - family U32 unassigned peptidases (Chthonomonas calidirosea) [U32.UPW]#U32#{peptidase unit: 148-232}~source YP_008089209~ False 0.581 99.0 1.791e-20 Aminotransferase class I and II [PF00155.24]; Aminotransferase class-III [PF00202.24]; Cys/Met metabolism PLP-dependent enzyme [PF01053.23] 0 +dataset_4924_scaffold_273_69 dataset_4924 scaffold_273 69 73149 74048 1 D Glycosyltransferase like family 2 [PF13641.9]; Glycosyl transferase family 2 [PF00535.29]; Glycosyltransferase like family 2 [PF10111.12] GT27; GT2_Glycos_transf_2; GT2_Glyco_tranf_2_2; GT2_Glyco_tranf_2_3 GT2 cellulose synthase (EC 2.4.1.12); chitin synthase (EC 2.4.1.16); dolichyl-phosphate beta-D-mannosyltransferase (EC 2.4.1.83); dolichyl-phosphate beta-glucosyltransferase (EC 2.4.1.117); N-acetylglucosaminyltransferase (EC 2.4.1.-); N-acetylgalactosaminyltransferase (EC 2.4.1.-); hyaluronan synthase (EC 2.4.1.212); chitin oligosaccharide synthase (EC 2.4.1.-); beta-1,3-glucan synthase (EC 2.4.1.34); beta-1,4-mannan synthase (EC 2.4.1.-); beta-mannosylphosphodecaprenol-mannooligosaccharide alpha-1,6-mannosyltransferase (EC 2.4.1.199); UDP-Galf: rhamnopyranosyl-N-acetylglucosaminyl-PP-decaprenol beta-1,4/1,5-galactofuranosyltransferase (EC 2.4.1.287); UDP-Galf: galactofuranosyl-galactofuranosyl-rhamnosyl-N-acetylglucosaminyl-PP-decaprenol beta-1,5/1,6-galactofuranosyltransferase (EC 2.4.1.288); dTDP-L-Rha: N-acetylglucosaminyl-PP-decaprenol alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.289); alternating beta-1,3/4-N-acetylmannan synthase (2.4.1.-); GT27 polypeptide alpha-N-acetylgalactosaminyltransferase (EC 2.4.1.41) 0 +dataset_4924_scaffold_273_70 dataset_4924 scaffold_273 70 74063 75577 1 E 0 +dataset_4924_scaffold_273_71 dataset_4924 scaffold_273 71 76023 76967 1 D LysM domain [PF01476.23]; Carbohydrate binding domain [PF02018.20] 0 +dataset_4924_scaffold_273_72 dataset_4924 scaffold_273 72 77056 77880 -1 E 0 +dataset_4924_scaffold_361_1 dataset_4924 scaffold_361 1 94 1488 -1 C K03893 arsenical pump membrane protein Citrate transporter [PF03600.19]; Arsenical pump membrane protein [PF02040.18]; Sodium:sulfate symporter transmembrane region [PF00939.22] 0 +dataset_4924_scaffold_361_2 dataset_4924 scaffold_361 2 1939 2751 -1 C K09121 pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] Nickel insertion protein [PF01969.20] 0 +dataset_4924_scaffold_361_3 dataset_4924 scaffold_361 3 2786 3010 -1 E 0 +dataset_4924_scaffold_361_4 dataset_4924 scaffold_361 4 3141 3773 1 C K07130 arylformamidase [EC:3.5.1.9] Putative cyclase [PF04199.16] 0 +dataset_4924_scaffold_361_5 dataset_4924 scaffold_361 5 3873 4175 1 C K07166 ACT domain-containing protein ACT domain [PF13740.9]; ACT domain [PF01842.28] 0 +dataset_4924_scaffold_361_6 dataset_4924 scaffold_361 6 4192 5550 1 C K09157 uncharacterized protein Uncharacterised ACR (DUF711) [PF05167.15] 0 +dataset_4924_scaffold_361_7 dataset_4924 scaffold_361 7 5582 7978 -1 C K02238 competence protein ComEC Competence protein [PF03772.19]; Domain of unknown function (DUF4131) [PF13567.9]; Beta-lactamase superfamily domain [PF12706.10]; Metallo-beta-lactamase superfamily [PF00753.30] 0 +dataset_4924_scaffold_361_8 dataset_4924 scaffold_361 8 8297 9103 -1 D Uncharacterised ArCR, COG2043 [PF02596.18] 0 +dataset_4924_scaffold_361_9 dataset_4924 scaffold_361 9 9365 10048 -1 C K02237 competence protein ComEA Helix-hairpin-helix motif [PF12836.10]; SLBB domain [PF10531.12] 0 +dataset_4924_scaffold_361_10 dataset_4924 scaffold_361 10 10315 11178 1 C K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] HpcH/HpaI aldolase/citrate lyase family [PF03328.17]; C-C_Bond_Lyase of the TIM-Barrel fold [PF15617.9] 0 +dataset_4924_scaffold_361_11 dataset_4924 scaffold_361 11 11282 11497 -1 C K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Sulfurtransferase TusA [PF01206.20] 0 +dataset_4924_scaffold_361_12 dataset_4924 scaffold_361 12 11478 12560 -1 D Sulphur transport [PF04143.17] 0 +dataset_4924_scaffold_361_13 dataset_4924 scaffold_361 13 12987 14258 1 D 2-hydroxyglutaryl-CoA dehydratase, D-component [PF06050.16] 0 +dataset_4924_scaffold_361_14 dataset_4924 scaffold_361 14 14273 15100 1 C K23876 (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] BadF/BadG/BcrA/BcrD ATPase family [PF01869.23] 0 +dataset_4924_scaffold_361_15 dataset_4924 scaffold_361 15 15140 15721 -1 D Protein of unknown function (DUF1694) [PF07997.14] 0 +dataset_4924_scaffold_361_16 dataset_4924 scaffold_361 16 15865 16233 -1 C K06199 fluoride exporter CrcB-like protein, Camphor Resistance (CrcB) [PF02537.18] 0 +dataset_4924_scaffold_361_17 dataset_4924 scaffold_361 17 16226 16648 -1 C K06199 fluoride exporter CrcB-like protein, Camphor Resistance (CrcB) [PF02537.18] 0 +dataset_4924_scaffold_361_18 dataset_4924 scaffold_361 18 16791 17219 -1 D Universal stress protein family [PF00582.29] 0 +dataset_4924_scaffold_361_19 dataset_4924 scaffold_361 19 17483 18427 -1 C K07090 uncharacterized protein Sulfite exporter TauE/SafE [PF01925.22] 0 +dataset_4924_scaffold_361_20 dataset_4924 scaffold_361 20 18517 18909 -1 E 0 +dataset_4924_scaffold_361_21 dataset_4924 scaffold_361 21 19273 19935 -1 C K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Cyclic nucleotide-binding domain [PF00027.32]; Crp-like helix-turn-helix domain [PF13545.9] 0 +dataset_4924_scaffold_361_22 dataset_4924 scaffold_361 22 20145 20858 -1 C K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Cyclic nucleotide-binding domain [PF00027.32]; Crp-like helix-turn-helix domain [PF13545.9] 0 +dataset_4924_scaffold_361_23 dataset_4924 scaffold_361 23 20949 21860 -1 C K02257 heme o synthase [EC:2.5.1.141] UbiA prenyltransferase family [PF01040.21] 0 +dataset_4924_scaffold_361_24 dataset_4924 scaffold_361 24 22285 22821 -1 C K01726 gamma-carbonic anhydrase [EC:4.2.1.-] Hexapeptide repeat of succinyl-transferase [PF14602.9] 0 +dataset_4924_scaffold_361_25 dataset_4924 scaffold_361 25 22884 23831 -1 C K00459 nitronate monooxygenase [EC:1.13.12.16] Nitronate monooxygenase [PF03060.18]; Dihydroorotate dehydrogenase [PF01180.24] 0 +dataset_4924_scaffold_361_26 dataset_4924 scaffold_361 26 24266 25090 -1 C K02030 polar amino acid transport system substrate-binding protein Bacterial extracellular solute-binding proteins, family 3 [PF00497.23] 0 +dataset_4924_scaffold_361_27 dataset_4924 scaffold_361 27 25367 26206 1 C K07098 uncharacterized protein Calcineurin-like phosphoesterase superfamily domain [PF12850.10]; Calcineurin-like phosphoesterase [PF00149.31] 0 +dataset_4924_scaffold_361_28 dataset_4924 scaffold_361 28 26464 27114 1 C K11068 hemolysin III Haemolysin-III related [PF03006.23] 0 +dataset_4924_scaffold_361_29 dataset_4924 scaffold_361 29 27527 29290 1 C K18231 macrolide transport system ATP-binding/permease protein ABC transporter [PF00005.30]; ABC transporter [PF12848.10] 0 +dataset_4924_scaffold_361_30 dataset_4924 scaffold_361 30 29651 30511 -1 C K25232 fatty acid kinase fatty acid binding subunit Uncharacterised protein, DegV family COG1307 [PF02645.19] 0 +dataset_4924_scaffold_361_31 dataset_4924 scaffold_361 31 30618 32243 -1 C K07030 fatty acid kinase [EC:2.7.2.18] Dihydroxyacetone kinase family [PF13684.9]; DAK2 domain [PF02734.20] 0 +dataset_4924_scaffold_361_32 dataset_4924 scaffold_361 32 32446 33621 1 C K18166 FAD-dependent oxidoreductase domain-containing protein 1 FAD dependent oxidoreductase [PF01266.27]; FAD binding domain [PF00890.27] 0 +dataset_4924_scaffold_361_33 dataset_4924 scaffold_361 33 33718 33999 -1 D Coat F domain [PF07875.15] 0 +dataset_4924_scaffold_361_34 dataset_4924 scaffold_361 34 34019 34243 -1 E 0 +dataset_4924_scaffold_361_35 dataset_4924 scaffold_361 35 34449 35312 1 D MER0462609 C82A MER0462609 - subfamily C82A unassigned peptidases (Desulfotomaculum gibsoniae) [C82.UPA]#C82A#{peptidase unit: 39-148}~source ZP_09102946~ False 1.0 238.0 1.423e-68 L,D-transpeptidase catalytic domain [PF03734.17]; Copper amine oxidase N-terminal domain [PF07833.14] 0 +dataset_4924_scaffold_361_36 dataset_4924 scaffold_361 36 35477 36568 -1 D Protein of unknown function (DUF933) [PF06071.16]; 50S ribosome-binding GTPase [PF01926.26] 0 +dataset_4924_scaffold_361_37 dataset_4924 scaffold_361 37 36642 37466 -1 C K13566 omega-amidase [EC:3.5.1.3] Carbon-nitrogen hydrolase [PF00795.25] 0 +dataset_4924_scaffold_361_38 dataset_4924 scaffold_361 38 37733 37867 -1 D NifU-like domain [PF01106.20] 0 +dataset_4924_scaffold_361_39 dataset_4924 scaffold_361 39 38041 39312 -1 D Putative zinc-finger [PF13490.9]; Domain of unknown function (DUF4349) [PF14257.9] 0 +dataset_4924_scaffold_361_40 dataset_4924 scaffold_361 40 39299 39922 -1 C K03088 RNA polymerase sigma-70 factor, ECF subfamily ECF sigma factor [PF07638.14]; Sigma-70 region 2 [PF04542.17]; Sigma-70, region 4 [PF08281.15]; Sigma-70, region 4 [PF04545.19] 0 +dataset_4924_scaffold_361_41 dataset_4924 scaffold_361 41 40179 40796 -1 E 0 +dataset_4924_scaffold_361_42 dataset_4924 scaffold_361 42 41448 41813 1 E 0 +dataset_4924_scaffold_361_43 dataset_4924 scaffold_361 43 41826 42668 1 D Helicase conserved C-terminal domain [PF00271.34] 0 +dataset_4924_scaffold_361_44 dataset_4924 scaffold_361 44 42787 43158 1 E 0 +dataset_4924_scaffold_361_45 dataset_4924 scaffold_361 45 43765 44358 1 D Transcriptional regulator, AbiEi antitoxin [PF13338.9] 0 +dataset_4924_scaffold_361_46 dataset_4924 scaffold_361 46 44355 45212 1 C K09144 uncharacterized protein Nucleotidyl transferase AbiEii toxin, Type IV TA system [PF08843.14] 0 +dataset_4924_scaffold_361_47 dataset_4924 scaffold_361 47 45449 45799 1 E 0 +dataset_4924_scaffold_361_48 dataset_4924 scaffold_361 48 45921 46598 1 E 0 +dataset_4924_scaffold_361_49 dataset_4924 scaffold_361 49 46635 47075 1 D Acetyltransferase (GNAT) domain [PF13508.10]; Acetyltransferase (GNAT) domain [PF13673.10]; Acetyltransferase (GNAT) family [PF00583.28] 0 +dataset_4924_scaffold_361_50 dataset_4924 scaffold_361 50 47134 47649 1 C K22441 diamine N-acetyltransferase [EC:2.3.1.57] Acetyltransferase (GNAT) family [PF00583.28]; Acetyltransferase (GNAT) domain [PF13420.10]; FR47-like protein [PF08445.13]; Acetyltransferase (GNAT) domain [PF13508.10]; Acetyltransferase (GNAT) domain [PF13302.10] 0 +dataset_4924_scaffold_361_51 dataset_4924 scaffold_361 51 47701 48123 1 C K03826 putative acetyltransferase [EC:2.3.1.-] Acetyltransferase (GNAT) domain [PF13508.10]; Acetyltransferase (GNAT) domain [PF13673.10]; Acetyltransferase (GNAT) family [PF00583.28] 0 +dataset_4924_scaffold_361_52 dataset_4924 scaffold_361 52 48491 48787 1 E 0 +dataset_4924_scaffold_361_53 dataset_4924 scaffold_361 53 48819 49226 1 D Protein of unknown function (DUF3848) [PF12959.10] 0 +dataset_4924_scaffold_361_54 dataset_4924 scaffold_361 54 49081 50697 -1 C K02172 bla regulator protein blaR1 MER0934474 M56 MER0934474 - PenR1 peptidase (Desulfotomaculum gibsoniae) [M56.003]#M56#{peptidase unit: 119-283}~source R4KGH5~ False 0.972 340.0 1.018e-99 BlaR1 peptidase M56 [PF05569.14] 0 +dataset_4924_scaffold_361_55 dataset_4924 scaffold_361 55 50694 51089 -1 C K02171 BlaI family transcriptional regulator, penicillinase repressor Penicillinase repressor [PF03965.19] 0 +dataset_4924_scaffold_361_56 dataset_4924 scaffold_361 56 51094 52134 -1 C K01005 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] LytR_cpsA_psr family [PF03816.17] 0 +dataset_4924_scaffold_361_57 dataset_4924 scaffold_361 57 52605 53528 -1 C K09681 LysR family transcriptional regulator, transcription activator of glutamate synthase operon LysR substrate binding domain [PF03466.23]; Bacterial regulatory helix-turn-helix protein, lysR family [PF00126.30] 0 +dataset_4924_scaffold_361_58 dataset_4924 scaffold_361 58 53719 53910 1 E 0 +dataset_4924_scaffold_361_59 dataset_4924 scaffold_361 59 54040 55248 1 C K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Mycolic acid cyclopropane synthetase [PF02353.23]; Methyltransferase domain [PF13649.9]; Methyltransferase domain [PF13847.9]; Methyltransferase domain [PF13489.9]; Methyltransferase domain [PF08241.15]; Methyltransferase small domain [PF05175.17]; ubiE/COQ5 methyltransferase family [PF01209.21] 0 +dataset_4924_scaffold_361_60 dataset_4924 scaffold_361 60 55822 56406 -1 E 0 +dataset_4924_scaffold_361_61 dataset_4924 scaffold_361 61 56847 57461 -1 C K03975 membrane-associated protein SNARE associated Golgi protein [PF09335.14] 0 +dataset_4924_scaffold_361_62 dataset_4924 scaffold_361 62 57668 58507 -1 C K03799 heat shock protein HtpX [EC:3.4.24.-] MER0884244 M48A MER0884244 - subfamily M48A unassigned peptidases () [M48.UPA]#M48A#{peptidase unit: 7-276}~source A0A0F2PRW9~ True 0.806 449.0 1.125e-141 Peptidase family M48 [PF01435.21]; BlaR1 peptidase M56 [PF05569.14] 0 +dataset_4924_scaffold_361_63 dataset_4924 scaffold_361 63 58601 59035 -1 C K11923 MerR family transcriptional regulator, copper efflux regulator MerR HTH family regulatory protein [PF13411.9]; MerR family regulatory protein [PF00376.26]; MerR, DNA binding [PF09278.14] 0 +dataset_4924_scaffold_361_64 dataset_4924 scaffold_361 64 59211 60200 -1 C K07301 cation:H+ antiporter Sodium/calcium exchanger protein [PF01699.27] 0 +dataset_4924_scaffold_361_65 dataset_4924 scaffold_361 65 60766 61740 -1 D MER0964354 S01C MER0964354 - subfamily S1C unassigned peptidases (Desulfotomaculum gibsoniae) [S01.UPC]#S01C#{peptidase unit: 163-294}~source R4KC33~ False 0.991 278.0 5.782e-82 Trypsin-like peptidase domain [PF13365.9]; Peptidase S46 [PF10459.12] 0 +dataset_4924_scaffold_369_1 dataset_4924 scaffold_369 1 3 131 1 D Phosphoribosylglycinamide synthetase, C domain [PF02843.19] 0 +dataset_4924_scaffold_369_2 dataset_4924 scaffold_369 2 252 545 1 D Antidote-toxin recognition MazE, bacterial antitoxin [PF04014.21] 0 +dataset_4924_scaffold_369_3 dataset_4924 scaffold_369 3 532 954 1 C K07063 uncharacterized protein PIN domain [PF13470.9] 0 +dataset_4924_scaffold_369_4 dataset_4924 scaffold_369 4 1224 1544 1 D Trp repressor protein [PF01371.22] 0 +dataset_4924_scaffold_369_5 dataset_4924 scaffold_369 5 1618 3150 1 C K00013 histidinol dehydrogenase [EC:1.1.1.23] Histidinol dehydrogenase [PF00815.23] 0 +dataset_4924_scaffold_369_6 dataset_4924 scaffold_369 6 3152 4234 1 C K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Aminotransferase class I and II [PF00155.24] 0 +dataset_4924_scaffold_369_7 dataset_4924 scaffold_369 7 4235 4834 1 C K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Imidazoleglycerol-phosphate dehydratase [PF00475.21] 0 +dataset_4924_scaffold_369_8 dataset_4924 scaffold_369 8 4856 5467 1 C K02501 imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] MER0443744 C26 MER0443744 - imidazole glycerol phosphate synthase subunit HisH (Desulfotomaculum gibsoniae) [C26.965]#C26#{peptidase unit: 2-196}~source ZP_09101790~ True 0.986 408.0 4.147e-129 Glutamine amidotransferase class-I [PF00117.31]; CobB/CobQ-like glutamine amidotransferase domain [PF07685.17]; Peptidase C26 [PF07722.16] 0 +dataset_4924_scaffold_369_9 dataset_4924 scaffold_369 9 5461 6207 1 C K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Histidine biosynthesis protein [PF00977.24] 0 +dataset_4924_scaffold_369_10 dataset_4924 scaffold_369 10 6207 6959 1 C K02500 imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] Histidine biosynthesis protein [PF00977.24] 0 +dataset_4924_scaffold_369_11 dataset_4924 scaffold_369 11 6999 7403 1 C K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] Phosphoribosyl-AMP cyclohydrolase [PF01502.21] 0 +dataset_4924_scaffold_369_12 dataset_4924 scaffold_369 12 7618 9807 1 C K03657 ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] UvrD/REP helicase N-terminal domain [PF00580.24]; UvrD-like helicase C-terminal domain [PF13361.9]; AAA domain [PF13245.9]; UvrD-like helicase C-terminal domain [PF13538.9] 0 +dataset_4924_scaffold_369_13 dataset_4924 scaffold_369 13 9823 11847 1 C K01972 DNA ligase (NAD+) [EC:6.5.1.2] NAD-dependent DNA ligase adenylation domain [PF01653.21]; NAD-dependent DNA ligase OB-fold domain [PF03120.19]; Helix-hairpin-helix motif [PF12826.10]; BRCA1 C Terminus (BRCT) domain [PF00533.29]; NAD-dependent DNA ligase C4 zinc finger domain [PF03119.19]; twin BRCT domain [PF12738.10] 0 +dataset_4924_scaffold_369_14 dataset_4924 scaffold_369 14 12084 12365 1 C K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Glu-tRNAGln amidotransferase C subunit [PF02686.18] 0 +dataset_4924_scaffold_369_15 dataset_4924 scaffold_369 15 12432 13886 1 C K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Amidase [PF01425.24] 0 +dataset_4924_scaffold_369_16 dataset_4924 scaffold_369 16 13907 15349 1 C K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] GatB/GatE catalytic domain [PF02934.18]; GatB domain [PF02637.21] 0 +dataset_4924_scaffold_369_17 dataset_4924 scaffold_369 17 15564 16721 1 C K02594 homocitrate synthase NifV [EC:2.3.3.14] HMGL-like [PF00682.22] 0 +dataset_4924_scaffold_369_18 dataset_4924 scaffold_369 18 17025 17396 1 D Starch/carbohydrate-binding module (family 53) [PF16760.8]; Carbohydrate binding domain (family 25) [PF03423.16] CBM25 CBM25 Starch-binding function demonstrated in one case. 0 +dataset_4924_scaffold_369_19 dataset_4924 scaffold_369 19 17665 18909 1 C K16150 glycogen synthase [EC:2.4.1.11] Glycosyl transferases group 1 [PF00534.23]; Glycosyl transferases group 1 [PF13692.9]; Glycosyltransferase Family 4 [PF13439.9]; Glycosyl transferase 4-like domain [PF13579.9]; Glycosyl transferases group 1 [PF13524.9]; Starch synthase catalytic domain [PF08323.14] GT4; GT5 GT4 sucrose synthase (EC 2.4.1.13); sucrose-phosphate synthase (EC 2.4.1.14); alpha-glucosyltransferase (EC 2.4.1.52); lipopolysaccharide N-acetylglucosaminyltransferase (EC 2.4.1.56); phosphatidylinositol alpha-mannosyltransferase (EC 2.4.1.57); GDP-Man: Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase (EC 2.4.1.132); GDP-Man: Man3GlcNAc2-PP-dolichol/Man4GlcNAc2-PP-dolichol alpha-1,2-mannosyltransferase (EC 2.4.1.131); digalactosyldiacylglycerol synthase (EC 2.4.1.141); 1,2-diacylglycerol 3-glucosyltransferase (EC 2.4.1.157); diglucosyl diacylglycerol synthase (EC 2.4.1.208); trehalose phosphorylase (EC 2.4.1.231); NDP-Glc: alpha-glucose alpha-glucosyltransferase / alpha,alpha-trehalose synthase (EC 2.4.1.245); GDP-Man: Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase (EC 2.4.1.257); UDP-GlcNAc: 2-deoxystreptamine alpha-N-acetylglucosaminyltransferase (EC 2.4.1.283); UDP-GlcNAc: ribostamycin alpha-N-acetylglucosaminyltransferase (EC 2.4.1.285); UDP-Gal alpha-galactosyltransferase (EC 2.4.1.-); UDP-Xyl alpha-xylosyltransferase (EC 2.4.2.-); UDP-GlcA alpha-glucuronyltransferase (EC 2.4.1.-); UDP-Glc alpha-glucosyltransferase (EC 2.4.1.-); UDP-GalNAc: GalNAc-PP-Und alpha-1,3-N-acetylgalactosaminyltransferase (EC 2.4.1.306); UDP-GalNAc: N,N'-diacetylbacillosaminyl-PP-Und alpha-1,3-N-acetylgalactosaminyltransferase (EC 2.4.1.290); ADP-dependent alpha-maltose-1-phosphate synthase (2.4.1.342); GT5 UDP-Glc: glycogen glucosyltransferase (EC 2.4.1.11); ADP-Glc: starch glucosyltransferase (EC 2.4.1.21); NDP-Glc: starch glucosyltransferase (EC 2.4.1.242); UDP-Glc: alpha-1,3-glucan synthase (EC 2.4.1.183) UDP-Glc: alpha-1,4-glucan synthase (EC 2.4.1.-) 0 +dataset_4924_scaffold_369_20 dataset_4924 scaffold_369 20 18970 21471 1 C K16881 mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] Nucleotidyl transferase [PF00483.26]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I [PF02878.19]; MobA-like NTP transferase domain [PF12804.10]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II [PF02879.19]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III [PF02880.19] 0 +dataset_4924_scaffold_369_21 dataset_4924 scaffold_369 21 21544 22158 -1 C K07034 uncharacterized protein GPR1/FUN34/yaaH family [PF01184.22] 0 +dataset_4924_scaffold_369_22 dataset_4924 scaffold_369 22 22550 24160 -1 C K16149 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Glycosyl hydrolase family 57 [PF03065.18]; 1,4-alpha-glucan branching enzyme, C-terminal [PF09210.14] GH57 GH57 alpha-amylase (EC 3.2.1.1); alpha-galactosidase (EC 3.2.1.22); amylopullulanase (EC 3.2.1.41); cyclomaltodextrinase (EC 3.2.1.54); branching enzyme (EC 2.4.1.18); 4-alpha-glucanotransferase (EC 2.4.1.25) 0 +dataset_4924_scaffold_369_23 dataset_4924 scaffold_369 23 24191 24919 -1 C K09942 uncharacterized protein Domain of unknown function (DUF4912) [PF16258.8] 0 +dataset_4924_scaffold_369_24 dataset_4924 scaffold_369 24 25171 25593 1 C K06929 uncharacterized protein CoA binding domain [PF13380.9] 0 +dataset_4924_scaffold_369_25 dataset_4924 scaffold_369 25 25657 26241 1 C K10773 endonuclease III [EC:4.2.99.18] HhH-GPD superfamily base excision DNA repair protein [PF00730.28]; Helix-hairpin-helix motif [PF00633.26] 0 +dataset_4924_scaffold_369_26 dataset_4924 scaffold_369 26 26247 26726 1 C K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] SpoU rRNA Methylase family [PF00588.22] 0 +dataset_4924_scaffold_369_27 dataset_4924 scaffold_369 27 26809 27759 1 D AAA domain (dynein-related subfamily) [PF07728.17]; ATPase family associated with various cellular activities (AAA) [PF00004.32]; ATPase family associated with various cellular activities (AAA) [PF07726.14] 0 +dataset_4924_scaffold_369_28 dataset_4924 scaffold_369 28 27855 29570 1 C K06714 arginine utilization regulatory protein Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; Bacterial regulatory protein, Fis family [PF02954.22]; AAA domain (dynein-related subfamily) [PF07728.17]; PAS fold [PF00989.28]; PAS fold [PF08448.13]; Helix-turn-helix domain [PF18024.4]; PAS domain [PF13426.10] 0 +dataset_4924_scaffold_369_29 dataset_4924 scaffold_369 29 29693 30310 1 D Lysine methyltransferase [PF10294.12]; Methyltransferase small domain [PF05175.17] 0 +dataset_4924_scaffold_369_30 dataset_4924 scaffold_369 30 30424 33879 1 C K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Bacterial DNA polymerase III alpha NTPase domain [PF07733.15]; Bacterial DNA polymerase III alpha subunit finger domain [PF17657.4]; PHP domain [PF02811.22]; Helix-hairpin-helix motif [PF14579.9]; OB-fold nucleic acid binding domain [PF01336.28] 0 +dataset_4924_scaffold_369_31 dataset_4924 scaffold_369 31 33935 34168 1 C K06285 transcription attenuation protein (tryptophan RNA-binding attenuator protein) Tryptophan RNA-binding attenuator protein [PF02081.18] 0 +dataset_4924_scaffold_369_32 dataset_4924 scaffold_369 32 34450 35412 1 C K00850 6-phosphofructokinase 1 [EC:2.7.1.11] Phosphofructokinase [PF00365.23] 0 +dataset_4924_scaffold_369_33 dataset_4924 scaffold_369 33 35425 37176 1 C K00873 pyruvate kinase [EC:2.7.1.40] Pyruvate kinase, barrel domain [PF00224.24]; Pyruvate kinase, alpha/beta domain [PF02887.19]; PEP-utilising enzyme, mobile domain [PF00391.26]; HpcH/HpaI aldolase/citrate lyase family [PF03328.17] 0 +dataset_4924_scaffold_369_34 dataset_4924 scaffold_369 34 37286 37894 1 C K03975 membrane-associated protein SNARE associated Golgi protein [PF09335.14] 0 +dataset_4924_scaffold_369_35 dataset_4924 scaffold_369 35 37891 38478 1 C K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] GDSL-like Lipase/Acylhydrolase family [PF13472.9] 0 +dataset_4924_scaffold_369_36 dataset_4924 scaffold_369 36 38908 40503 1 D AMP-binding enzyme [PF00501.31]; AMP-binding enzyme C-terminal domain [PF13193.9] 0 +dataset_4924_scaffold_369_37 dataset_4924 scaffold_369 37 40624 41367 -1 C K09740 uncharacterized protein 0 +dataset_4924_scaffold_369_38 dataset_4924 scaffold_369 38 41364 41765 -1 C K23976 L-aspartate semialdehyde sulfurtransferase ferredoxin 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF12838.10]; NIL domain [PF09383.13]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF13247.9]; 4Fe-4S double cluster binding domain [PF13484.9]; 4Fe-4S dicluster domain [PF13534.9]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S binding domain [PF00037.30]; 4Fe-4S dicluster domain [PF13746.9] 1 +dataset_4924_scaffold_369_39 dataset_4924 scaffold_369 39 41790 42986 -1 C K23975 L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] Homocysteine biosynthesis enzyme, sulfur-incorporation [PF01837.19] 0 +dataset_4924_scaffold_369_40 dataset_4924 scaffold_369 40 43386 44792 1 D S-layer homology domain [PF00395.23] SLH 0 +dataset_4924_scaffold_369_41 dataset_4924 scaffold_369 41 45010 46344 -1 D Aminotransferase class-V [PF00266.22]; Aminotransferase class I and II [PF00155.24] 0 +dataset_4924_scaffold_369_42 dataset_4924 scaffold_369 42 46601 48229 -1 D NAD synthase [PF02540.20]; Carbon-nitrogen hydrolase [PF00795.25]; tRNA methyl transferase HUP domain [PF03054.19] 0 +dataset_4924_scaffold_369_43 dataset_4924 scaffold_369 43 48675 49598 1 D HMGL-like [PF00682.22] 0 +dataset_4924_scaffold_369_44 dataset_4924 scaffold_369 44 50107 50931 1 C K02588 nitrogenase iron protein NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family [PF00142.21]; AAA domain [PF13614.9]; NUBPL iron-transfer P-loop NTPase [PF10609.12]; ATPase MipZ [PF09140.14]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.26] 0 +dataset_4924_scaffold_369_45 dataset_4924 scaffold_369 45 50992 51321 1 C K02589 nitrogen regulatory protein PII 1 Nitrogen regulatory protein P-II [PF00543.25] 0 +dataset_4924_scaffold_369_46 dataset_4924 scaffold_369 46 51347 51727 1 C K02590 nitrogen regulatory protein PII 2 Nitrogen regulatory protein P-II [PF00543.25] 0 +dataset_4924_scaffold_369_47 dataset_4924 scaffold_369 47 51776 53416 1 C K02586 nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] Nitrogenase component 1 type Oxidoreductase [PF00148.22] 0 +dataset_4924_scaffold_369_48 dataset_4924 scaffold_369 48 53416 54801 1 C K02591 nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] Nitrogenase component 1 type Oxidoreductase [PF00148.22] 0 +dataset_4924_scaffold_369_49 dataset_4924 scaffold_369 49 54818 56227 1 C K02587 nitrogenase molybdenum-cofactor synthesis protein NifE Nitrogenase component 1 type Oxidoreductase [PF00148.22] 0 +dataset_4924_scaffold_369_50 dataset_4924 scaffold_369 50 56214 57623 1 C K02592 nitrogenase molybdenum-iron protein NifN Nitrogenase component 1 type Oxidoreductase [PF00148.22] 0 +dataset_4924_scaffold_369_51 dataset_4924 scaffold_369 51 57629 58585 1 C K02585 nitrogen fixation protein NifB Radical SAM superfamily [PF04055.24] 0 +dataset_4924_scaffold_369_52 dataset_4924 scaffold_369 52 58602 58913 1 D Thioredoxin-like [2Fe-2S] ferredoxin [PF01257.22]; Sucrase/ferredoxin-like [PF06999.15] 0 +dataset_4924_scaffold_369_53 dataset_4924 scaffold_369 53 58968 59579 1 D Iron only nitrogenase protein AnfO (AnfO_nitrog) [PF09582.13] 0 +dataset_4924_scaffold_369_54 dataset_4924 scaffold_369 54 59728 60807 1 D Aromatic acid exporter family member 1 [PF06081.14]; Fusaric acid resistance protein family [PF04632.15] 0 +dataset_4924_scaffold_429_1 dataset_4924 scaffold_429 1 2 79 1 D Elongation factor Tu C-terminal domain [PF03143.20] 0 +dataset_4924_scaffold_429_2 dataset_4924 scaffold_429 2 119 427 1 C K02946 small subunit ribosomal protein S10 Ribosomal protein S10p/S20e [PF00338.25] 0 +dataset_4924_scaffold_429_3 dataset_4924 scaffold_429 3 571 1200 1 C K02906 large subunit ribosomal protein L3 Ribosomal protein L3 [PF00297.25] 0 +dataset_4924_scaffold_429_4 dataset_4924 scaffold_429 4 1231 1854 1 C K02926 large subunit ribosomal protein L4 Ribosomal protein L4/L1 family [PF00573.25] 0 +dataset_4924_scaffold_429_5 dataset_4924 scaffold_429 5 1854 2141 1 C K02892 large subunit ribosomal protein L23 Ribosomal protein L23 [PF00276.23] 0 +dataset_4924_scaffold_429_6 dataset_4924 scaffold_429 6 2204 3031 1 C K02886 large subunit ribosomal protein L2 Ribosomal Proteins L2, C-terminal domain [PF03947.21]; Ribosomal Proteins L2, RNA binding domain [PF00181.26] 0 +dataset_4924_scaffold_429_7 dataset_4924 scaffold_429 7 3065 3349 1 C K02965 small subunit ribosomal protein S19 Ribosomal protein S19 [PF00203.24] 0 +dataset_4924_scaffold_429_8 dataset_4924 scaffold_429 8 3371 3715 1 C K02890 large subunit ribosomal protein L22 Ribosomal protein L22p/L17e [PF00237.22] 0 +dataset_4924_scaffold_429_9 dataset_4924 scaffold_429 9 3717 4382 1 C K02982 small subunit ribosomal protein S3 Ribosomal protein S3, C-terminal domain [PF00189.23]; KH domain [PF07650.20] 0 +dataset_4924_scaffold_429_10 dataset_4924 scaffold_429 10 4388 4822 1 C K02878 large subunit ribosomal protein L16 Ribosomal protein L16p/L10e [PF00252.21] 0 +dataset_4924_scaffold_429_11 dataset_4924 scaffold_429 11 4836 5015 1 C K02904 large subunit ribosomal protein L29 Ribosomal L29 protein [PF00831.26] 0 +dataset_4924_scaffold_429_12 dataset_4924 scaffold_429 12 5054 5320 1 C K02961 small subunit ribosomal protein S17 Ribosomal protein S17 [PF00366.23] 0 +dataset_4924_scaffold_429_13 dataset_4924 scaffold_429 13 5364 5732 1 C K02874 large subunit ribosomal protein L14 Ribosomal protein L14p/L23e [PF00238.22] 0 +dataset_4924_scaffold_429_14 dataset_4924 scaffold_429 14 5762 6088 1 C K02895 large subunit ribosomal protein L24 Ribosomal proteins 50S L24/mitochondrial 39S L24 [PF17136.7]; Ribosomal proteins L26 eukaryotic, L24P archaeal [PF16906.8]; KOW motif [PF00467.32] 0 +dataset_4924_scaffold_429_15 dataset_4924 scaffold_429 15 6112 6654 1 C K02931 large subunit ribosomal protein L5 ribosomal L5P family C-terminus [PF00673.24]; Ribosomal protein L5 [PF00281.22] 0 +dataset_4924_scaffold_429_16 dataset_4924 scaffold_429 16 6901 7299 1 C K02994 small subunit ribosomal protein S8 Ribosomal protein S8 [PF00410.22] 0 +dataset_4924_scaffold_429_17 dataset_4924 scaffold_429 17 7325 7870 1 C K02933 large subunit ribosomal protein L6 Ribosomal protein L6 [PF00347.26] 0 +dataset_4924_scaffold_429_18 dataset_4924 scaffold_429 18 7892 8257 1 C K02881 large subunit ribosomal protein L18 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast [PF00861.25] 0 +dataset_4924_scaffold_429_19 dataset_4924 scaffold_429 19 8287 8787 1 C K02988 small subunit ribosomal protein S5 Ribosomal protein S5, C-terminal domain [PF03719.18]; Ribosomal protein S5, N-terminal domain [PF00333.23] 0 +dataset_4924_scaffold_429_20 dataset_4924 scaffold_429 20 8991 9434 1 C K02876 large subunit ribosomal protein L15 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A [PF00828.22] 0 +dataset_4924_scaffold_429_21 dataset_4924 scaffold_429 21 9436 10713 1 C K03076 preprotein translocase subunit SecY SecY [PF00344.23] 0 +dataset_4924_scaffold_429_22 dataset_4924 scaffold_429 22 10763 11473 1 C K01265 methionyl aminopeptidase [EC:3.4.11.18] MER0394776 M24A MER0394776 - subfamily M24A unassigned peptidases (Desulfotomaculum gibsoniae) [M24.UPA]#M24A#{peptidase unit: 1-235}~source ZP_09101520~ True 0.954 473.0 3.628e-151 Metallopeptidase family M24 [PF00557.27] 0 +dataset_4924_scaffold_429_23 dataset_4924 scaffold_429 23 11582 11872 1 E 0 +dataset_4924_scaffold_429_24 dataset_4924 scaffold_429 24 11894 12112 1 C K02518 translation initiation factor IF-1 Translation initiation factor 1A / IF-1 [PF01176.22] 0 +dataset_4924_scaffold_429_25 dataset_4924 scaffold_429 25 12282 12653 1 C K02952 small subunit ribosomal protein S13 Ribosomal protein S13/S18 [PF00416.25] 0 +dataset_4924_scaffold_429_26 dataset_4924 scaffold_429 26 12667 13056 1 C K02948 small subunit ribosomal protein S11 Ribosomal protein S11 [PF00411.22] 0 +dataset_4924_scaffold_429_27 dataset_4924 scaffold_429 27 13022 13705 1 C K02986 small subunit ribosomal protein S4 Ribosomal protein S4/S9 N-terminal domain [PF00163.22]; S4 domain [PF01479.28] 0 +dataset_4924_scaffold_429_28 dataset_4924 scaffold_429 28 13763 14710 1 C K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] RNA polymerase Rpb3/RpoA insert domain [PF01000.29]; RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.27]; Bacterial RNA polymerase, alpha chain C terminal domain [PF03118.18] 0 +dataset_4924_scaffold_429_29 dataset_4924 scaffold_429 29 14723 15061 1 C K02879 large subunit ribosomal protein L17 Ribosomal protein L17 [PF01196.22] 0 +dataset_4924_scaffold_429_30 dataset_4924 scaffold_429 30 15128 15970 1 C K16786 energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] ABC transporter [PF00005.30]; RecF/RecN/SMC N terminal domain [PF02463.22] 0 +dataset_4924_scaffold_429_31 dataset_4924 scaffold_429 31 15952 16827 1 D ABC transporter [PF00005.30] 0 +dataset_4924_scaffold_429_32 dataset_4924 scaffold_429 32 16827 17621 1 C K16785 energy-coupling factor transport system permease protein Cobalt transport protein [PF02361.19] 0 +dataset_4924_scaffold_429_33 dataset_4924 scaffold_429 33 17678 18421 1 C K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] tRNA pseudouridine synthase [PF01416.23] 0 +dataset_4924_scaffold_429_34 dataset_4924 scaffold_429 34 18563 18994 1 C K02871 large subunit ribosomal protein L13 Ribosomal protein L13 [PF00572.21] 0 +dataset_4924_scaffold_429_35 dataset_4924 scaffold_429 35 19016 19408 1 C K02996 small subunit ribosomal protein S9 Ribosomal protein S9/S16 [PF00380.22] 0 +dataset_4924_scaffold_429_36 dataset_4924 scaffold_429 36 19725 20531 1 C K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] N-acetylmuramoyl-L-alanine amidase [PF01520.21] 0 +dataset_4924_scaffold_429_37 dataset_4924 scaffold_429 37 20827 23499 -1 C K01537 P-type Ca2+ transporter type 2C [EC:7.2.2.10] Cation transporting ATPase, C-terminus [PF00689.24]; E1-E2 ATPase [PF00122.23]; haloacid dehalogenase-like hydrolase [PF00702.29]; Cation transport ATPase (P-type) [PF13246.9]; Cation transporter/ATPase, N-terminus [PF00690.29] 0 +dataset_4924_scaffold_429_38 dataset_4924 scaffold_429 38 23946 24527 1 C K03975 membrane-associated protein SNARE associated Golgi protein [PF09335.14] 0 +dataset_4924_scaffold_429_39 dataset_4924 scaffold_429 39 24626 25240 -1 C K13770 TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein YsiA-like protein, C-terminal region [PF08359.14]; Bacterial regulatory proteins, tetR family [PF00440.26] 0 +dataset_4924_scaffold_429_40 dataset_4924 scaffold_429 40 25348 27084 -1 D Acyl-CoA dehydrogenase, C-terminal domain [PF00441.27]; Acyl-CoA dehydrogenase, middle domain [PF02770.22]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.19] 0 +dataset_4924_scaffold_429_41 dataset_4924 scaffold_429 41 27193 28371 -1 C K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Thiolase, N-terminal domain [PF00108.26]; Thiolase, C-terminal domain [PF02803.21] 0 +dataset_4924_scaffold_429_42 dataset_4924 scaffold_429 42 28384 30807 -1 C K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.21]; Enoyl-CoA hydratase/isomerase [PF00378.23]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.25]; Enoyl-CoA hydratase/isomerase [PF16113.8] 0 +dataset_4924_scaffold_429_43 dataset_4924 scaffold_429 43 31293 31952 1 D LysE type translocator [PF01810.21] 0 +dataset_4924_scaffold_429_44 dataset_4924 scaffold_429 44 32031 33440 1 C K06990 MEMO1 family protein AMMECR1 [PF01871.20]; Catalytic LigB subunit of aromatic ring-opening dioxygenase [PF02900.21] 0 +dataset_4924_scaffold_429_45 dataset_4924 scaffold_429 45 33507 34493 1 C K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] 4Fe-4S single cluster domain [PF13353.9]; Radical SAM superfamily [PF04055.24]; 4Fe-4S single cluster domain [PF13394.9] 0 +dataset_4924_scaffold_429_46 dataset_4924 scaffold_429 46 34673 35425 1 C K12410 NAD-dependent deacetylase [EC:2.3.1.286] Sir2 family [PF02146.20] 0 +dataset_4924_scaffold_429_47 dataset_4924 scaffold_429 47 35654 37936 1 D DEAD/DEAH box helicase [PF00270.32]; Type III restriction enzyme, res subunit [PF04851.18] 0 +dataset_4924_scaffold_429_48 dataset_4924 scaffold_429 48 37939 39489 1 D DSHCT (NUC185) domain [PF08148.15]; Helicase conserved C-terminal domain [PF00271.34] 0 +dataset_4924_scaffold_429_49 dataset_4924 scaffold_429 49 39572 40036 1 D Protein of unknown function (DUF441) [PF04284.16] 0 +dataset_4924_scaffold_429_50 dataset_4924 scaffold_429 50 40274 40714 1 C K07076 uncharacterized protein Polymerase beta, Nucleotidyltransferase [PF18765.4]; Nucleotidyltransferase domain [PF01909.26] 0 +dataset_4924_scaffold_429_51 dataset_4924 scaffold_429 51 40704 41120 1 D Ribonuclease HepT-like [PF01934.20] 0 +dataset_4924_scaffold_429_52 dataset_4924 scaffold_429 52 41188 41352 -1 E 0 +dataset_4924_scaffold_429_53 dataset_4924 scaffold_429 53 41830 42801 -1 D FAD binding domain in molybdopterin dehydrogenase [PF00941.24]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.20] 0 +dataset_4924_scaffold_429_54 dataset_4924 scaffold_429 54 42852 45230 -1 D Molybdopterin cofactor-binding domain [PF02738.21]; Molybdopterin cofactor-binding domain [PF20256.1]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.25] 0 +dataset_4924_scaffold_429_55 dataset_4924 scaffold_429 55 45223 45744 -1 D [2Fe-2S] binding domain [PF01799.23]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.30]; 2Fe-2S iron-sulfur cluster binding domain [PF13085.9]; 2Fe-2S iron-sulfur cluster binding domain [PF13510.9] 0 +dataset_4924_scaffold_429_56 dataset_4924 scaffold_429 56 46443 47513 1 C K02016 iron complex transport system substrate-binding protein Periplasmic binding protein [PF01497.21] 0 +dataset_4924_scaffold_429_57 dataset_4924 scaffold_429 57 47538 48545 1 D MoeA C-terminal region (domain IV) [PF03454.18]; Putative heavy-metal chelation [PF13938.9] 0 +dataset_4924_scaffold_429_58 dataset_4924 scaffold_429 58 48849 49196 -1 C K07171 mRNA interferase MazF [EC:3.1.-.-] PemK-like, MazF-like toxin of type II toxin-antitoxin system [PF02452.20] 0 +dataset_4924_scaffold_429_59 dataset_4924 scaffold_429 59 49171 49434 -1 C K07172 antitoxin MazE Antidote-toxin recognition MazE, bacterial antitoxin [PF04014.21] 0 +dataset_4924_scaffold_429_60 dataset_4924 scaffold_429 60 49667 50020 1 C K10947 PadR family transcriptional regulator, regulatory protein PadR Transcriptional regulator PadR-like family [PF03551.17] 0 +dataset_4924_scaffold_429_61 dataset_4924 scaffold_429 61 50001 51296 1 D Cell cycle protein [PF01098.22] 0 +dataset_4924_scaffold_429_62 dataset_4924 scaffold_429 62 51153 51437 -1 E 0 +dataset_4924_scaffold_429_63 dataset_4924 scaffold_429 63 51928 53016 1 D Copper amine oxidase N-terminal domain [PF07833.14] 0 +dataset_4924_scaffold_429_64 dataset_4924 scaffold_429 64 53178 53660 -1 C K01449 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] 0 +dataset_4924_scaffold_589_1 dataset_4924 scaffold_589 1 252 764 1 E 0 +dataset_4924_scaffold_589_2 dataset_4924 scaffold_589 2 825 1439 1 E 0 +dataset_4924_scaffold_589_3 dataset_4924 scaffold_589 3 1429 2511 1 E 0 +dataset_4924_scaffold_589_4 dataset_4924 scaffold_589 4 2785 2970 -1 C K06425 small acid-soluble spore protein H (minor) Small acid-soluble spore protein H family [PF08141.15] 0 +dataset_4924_scaffold_589_5 dataset_4924 scaffold_589 5 3059 4051 -1 D NMT1-like family [PF13379.9]; NMT1/THI5 like [PF09084.14] 0 +dataset_4924_scaffold_589_6 dataset_4924 scaffold_589 6 4268 4738 1 D Protein of unknown function (DUF3792) [PF12670.10] 0 +dataset_4924_scaffold_589_7 dataset_4924 scaffold_589 7 5127 7784 1 C K01873 valyl-tRNA synthetase [EC:6.1.1.9] tRNA synthetases class I (I, L, M and V) [PF00133.25]; Anticodon-binding domain of tRNA ligase [PF08264.16]; tRNA synthetases class I (M) [PF09334.14]; Valyl tRNA synthetase tRNA binding arm [PF10458.12]; Leucyl-tRNA synthetase, Domain 2 [PF13603.9]; tRNA synthetases class I (K) [PF01921.21] 0 +dataset_4924_scaffold_589_8 dataset_4924 scaffold_589 8 8321 10294 -1 C K04759 ferrous iron transport protein B Ferrous iron transport protein B [PF02421.21]; 50S ribosome-binding GTPase [PF01926.26]; Nucleoside recognition [PF07670.17]; MnmE helical domain [PF12631.10]; Ferrous iron transport protein B C terminus [PF07664.15] 0 +dataset_4924_scaffold_589_9 dataset_4924 scaffold_589 9 10359 10577 -1 D FeoA domain [PF04023.17] 0 +dataset_4924_scaffold_589_10 dataset_4924 scaffold_589 10 10912 12036 -1 C K03406 methyl-accepting chemotaxis protein MER0501642 M23B MER0501642 - subfamily M23B unassigned peptidases (Clostridium saccharobutylicum) [M23.UPB]#M23B#{peptidase unit: 361-556}~source YP_008673405~ False 0.285 82.0 5.563e-15 Methyl-accepting chemotaxis protein (MCP) signalling domain [PF00015.24] 0 +dataset_4924_scaffold_589_11 dataset_4924 scaffold_589 11 12206 13507 1 C K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Mur ligase middle domain [PF08245.15]; Mur ligase family, glutamate ligase domain [PF02875.24] 0 +dataset_4924_scaffold_589_12 dataset_4924 scaffold_589 12 13589 13837 1 E 0 +dataset_4924_scaffold_589_13 dataset_4924 scaffold_589 13 13842 14099 1 D Domain of unknown function (DUF4321) [PF14209.9] 0 +dataset_4924_scaffold_589_14 dataset_4924 scaffold_589 14 14199 14786 1 C K06287 nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] Maf-like protein [PF02545.17] 0 +dataset_4924_scaffold_589_15 dataset_4924 scaffold_589 15 14793 15488 1 C K03630 DNA repair protein RadC RadC-like JAB domain [PF04002.18]; UPF0758 N-terminal [PF20582.1] 0 +dataset_4924_scaffold_589_16 dataset_4924 scaffold_589 16 15514 16545 1 C K03569 rod shape-determining protein MreB and related proteins MreB/Mbl protein [PF06723.16]; Hsp70 protein [PF00012.23]; Actin [PF00022.22]; Cell division protein FtsA [PF14450.9]; Type IV pilus assembly protein PilM; [PF11104.11] 0 +dataset_4924_scaffold_589_17 dataset_4924 scaffold_589 17 16667 17449 1 C K03570 rod shape-determining protein MreC rod shape-determining protein MreC [PF04085.17] 0 +dataset_4924_scaffold_589_18 dataset_4924 scaffold_589 18 17468 17977 1 C K03571 rod shape-determining protein MreD rod shape-determining protein MreD [PF04093.15] 0 +dataset_4924_scaffold_589_19 dataset_4924 scaffold_589 19 18004 20820 1 C K05515 penicillin-binding protein 2 [EC:3.4.16.4] Penicillin binding protein transpeptidase domain [PF00905.25]; Penicillin-binding Protein dimerisation domain [PF03717.18] 0 +dataset_4924_scaffold_589_20 dataset_4924 scaffold_589 20 21238 21663 1 C K03610 septum site-determining protein MinC Septum formation inhibitor MinC, C-terminal domain [PF03775.19] 0 +dataset_4924_scaffold_589_21 dataset_4924 scaffold_589 21 21707 22501 1 C K03609 septum site-determining protein MinD NUBPL iron-transfer P-loop NTPase [PF10609.12]; AAA domain [PF13614.9]; Cellulose biosynthesis protein BcsQ [PF06564.15]; ATPase MipZ [PF09140.14]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.26]; VirC1 protein [PF07015.14]; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family [PF00142.21]; Anion-transporting ATPase [PF02374.18] 0 +dataset_4924_scaffold_589_22 dataset_4924 scaffold_589 22 22523 22804 1 C K03608 cell division topological specificity factor Septum formation topological specificity factor MinE [PF03776.17] 0 +dataset_4924_scaffold_589_23 dataset_4924 scaffold_589 23 23003 24196 1 C K05837 rod shape determining protein RodA Cell cycle protein [PF01098.22] 0 +dataset_4924_scaffold_589_24 dataset_4924 scaffold_589 24 24340 25341 1 D MER0477998 M23B MER0477998 - subfamily M23B non-peptidase homologues (Desulfotomaculum gibsoniae) [M23.UNB]#M23B#{peptidase unit: 196-324}~source ZP_09101967~ False 0.973 267.0 9.925e-78 Peptidase family M23 [PF01551.25] 0 +dataset_4924_scaffold_589_25 dataset_4924 scaffold_589 25 25356 26231 1 C K06402 stage IV sporulation protein FB [EC:3.4.24.-] MER0248086 M50B MER0248086 - subfamily M50B unassigned peptidases (Desulfotomaculum kuznetsovii) [M50.UPB]#M50B#{peptidase unit: 1-288}~source YP_004515846~ False 0.618 349.0 4.061e-107 0 +dataset_4924_scaffold_589_26 dataset_4924 scaffold_589 26 26482 28362 1 D Radical SAM proteins, N-terminal [PF19864.2]; Radical SAM superfamily [PF04055.24] 0 +dataset_4924_scaffold_589_27 dataset_4924 scaffold_589 27 28334 28990 1 D Uncharacterized protein conserved in bacteria (DUF2344) [PF10105.12] 0 +dataset_4924_scaffold_589_28 dataset_4924 scaffold_589 28 29093 30787 1 C K08301 ribonuclease G [EC:3.1.26.-] Ribonuclease E/G family [PF10150.12] 0 +dataset_4924_scaffold_589_29 dataset_4924 scaffold_589 29 31049 31360 1 C K02888 large subunit ribosomal protein L21 Ribosomal prokaryotic L21 protein [PF00829.24] 0 +dataset_4924_scaffold_589_30 dataset_4924 scaffold_589 30 31379 31648 1 C K02899 large subunit ribosomal protein L27 Ribosomal L27 protein [PF01016.22] 0 +dataset_4924_scaffold_589_31 dataset_4924 scaffold_589 31 32015 32512 1 C K06375 stage 0 sporulation protein B (sporulation initiation phosphotransferase) [EC:2.7.-.-] Sensor_kinase_SpoOB-type, alpha-helical domain [PF14689.9] 0 +dataset_4924_scaffold_589_32 dataset_4924 scaffold_589 32 32635 33900 1 C K03979 GTPase [EC:3.6.5.-] GTP1/OBG [PF01018.25]; Domain of unknown function (DUF1967) [PF09269.14]; 50S ribosome-binding GTPase [PF01926.26]; Ferrous iron transport protein B [PF02421.21]; ADP-ribosylation factor family [PF00025.24] 0 +dataset_4924_scaffold_589_33 dataset_4924 scaffold_589 33 33916 35031 1 C K00931 glutamate 5-kinase [EC:2.7.2.11] Amino acid kinase family [PF00696.31]; PUA domain [PF01472.23] 0 +dataset_4924_scaffold_589_34 dataset_4924 scaffold_589 34 35120 36370 1 C K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Aldehyde dehydrogenase family [PF00171.25] 0 +dataset_4924_scaffold_589_35 dataset_4924 scaffold_589 35 36385 37005 1 C K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Cytidylyltransferase-like [PF01467.29] 0 +dataset_4924_scaffold_589_36 dataset_4924 scaffold_589 36 37110 37358 1 D RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.25] 0 +dataset_4924_scaffold_589_37 dataset_4924 scaffold_589 37 37823 38773 1 E 0 +dataset_4924_scaffold_589_38 dataset_4924 scaffold_589 38 39138 39473 1 E 0 +dataset_4924_scaffold_906_1 dataset_4924 scaffold_906 1 690 1979 1 D Permease family [PF00860.23] 0 +dataset_4924_scaffold_906_2 dataset_4924 scaffold_906 2 2075 2263 1 E 0 +dataset_4924_scaffold_906_3 dataset_4924 scaffold_906 3 2425 3816 1 C K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] tRNA synthetases class II (D, K and N) [PF00152.23]; OB-fold nucleic acid binding domain [PF01336.28] 0 +dataset_4924_scaffold_906_4 dataset_4924 scaffold_906 4 4005 5105 1 C K00441 coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus [PF04432.16]; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term [PF04422.16]; 4Fe-4S dicluster domain [PF14697.9] 0 +dataset_4924_scaffold_906_5 dataset_4924 scaffold_906 5 5102 7030 1 C K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg [PF01855.22]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.24]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF12838.10] 0 +dataset_4924_scaffold_906_6 dataset_4924 scaffold_906 6 7031 7642 1 C K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] Pyruvate ferredoxin/flavodoxin oxidoreductase [PF01558.21] 0 +dataset_4924_scaffold_906_7 dataset_4924 scaffold_906 7 7791 8777 -1 C K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] FAD binding domain in molybdopterin dehydrogenase [PF00941.24]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.20] 0 +dataset_4924_scaffold_906_8 dataset_4924 scaffold_906 8 8777 11059 -1 D Molybdopterin cofactor-binding domain [PF02738.21]; Molybdopterin cofactor-binding domain [PF20256.1]; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain [PF01315.25] 0 +dataset_4924_scaffold_906_9 dataset_4924 scaffold_906 9 11056 11580 -1 D [2Fe-2S] binding domain [PF01799.23]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.30]; 2Fe-2S iron-sulfur cluster binding domain [PF13085.9] 0 +dataset_4924_scaffold_906_10 dataset_4924 scaffold_906 10 12232 14316 1 C K03404 magnesium chelatase subunit D [EC:6.6.1.1] MER0227251 S16 MER0227251 - family S16 non-peptidase homologues (Methanothermus fervidus) [S16.UNW]#S16#{peptidase unit: 5-192}~source YP_004003725~ False 0.547 192.0 9.689e-49 Magnesium chelatase, subunit ChlI [PF01078.24]; von Willebrand factor type A domain [PF13519.9]; von Willebrand factor type A domain [PF00092.31]; AAA domain (dynein-related subfamily) [PF07728.17]; AAA lid domain [PF17863.4]; von Willebrand factor type A domain [PF13768.9] 0 +dataset_4924_scaffold_906_11 dataset_4924 scaffold_906 11 14366 15394 1 C K03405 magnesium chelatase subunit I [EC:6.6.1.1] MER0227251 S16 MER0227251 - family S16 non-peptidase homologues (Methanothermus fervidus) [S16.UNW]#S16#{peptidase unit: 5-192}~source YP_004003725~ False 0.645 235.0 1.015e-66 Magnesium chelatase, subunit ChlI [PF01078.24]; AAA domain (dynein-related subfamily) [PF07728.17]; AAA lid domain [PF17863.4]; MCM P-loop domain [PF00493.26]; Sigma-54 interaction domain [PF00158.29] 0 +dataset_4924_scaffold_906_12 dataset_4924 scaffold_906 12 15488 15916 1 D MarR family [PF01047.25]; Winged helix DNA-binding domain [PF13463.9]; MarR family [PF12802.10] 0 +dataset_4924_scaffold_906_13 dataset_4924 scaffold_906 13 15988 16509 1 D Predicted integral membrane protein (DUF2269) [PF10027.12] 0 +dataset_4924_scaffold_906_14 dataset_4924 scaffold_906 14 16578 17003 -1 E 0 +dataset_4924_scaffold_906_15 dataset_4924 scaffold_906 15 17478 17750 -1 E 0 +dataset_4924_scaffold_906_16 dataset_4924 scaffold_906 16 18116 19000 -1 C K05772 tungstate transport system substrate-binding protein 0 +dataset_4924_scaffold_906_17 dataset_4924 scaffold_906 17 19562 21157 1 C K07137 uncharacterized protein HI0933-like protein [PF03486.17]; FAD binding domain [PF01494.22]; FAD dependent oxidoreductase [PF12831.10] 0 +dataset_4924_scaffold_906_18 dataset_4924 scaffold_906 18 21402 21950 1 D Family of unknown function (DUF6272) [PF19788.2] 0 +dataset_4924_scaffold_906_19 dataset_4924 scaffold_906 19 21965 22354 1 D SiaC family regulatory phosphoprotein [PF09345.13] 0 +dataset_4924_scaffold_906_20 dataset_4924 scaffold_906 20 22408 24267 1 D Stage II sporulation protein E (SpoIIE) [PF07228.15]; Cache domain [PF02743.21] 0 +dataset_4924_scaffold_906_21 dataset_4924 scaffold_906 21 24327 24701 1 E 0 +dataset_4924_scaffold_987_1 dataset_4924 scaffold_987 1 2 1411 -1 E 0 +dataset_4924_scaffold_987_2 dataset_4924 scaffold_987 2 1797 2600 -1 D DeoC/LacD family aldolase [PF01791.12] 0 +dataset_4924_scaffold_987_3 dataset_4924 scaffold_987 3 2627 3661 -1 D Alcohol dehydrogenase GroES-like domain [PF08240.15]; Zinc-binding dehydrogenase [PF00107.29]; Glucose dehydrogenase C-terminus [PF16912.8]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.24]; Zinc-binding dehydrogenase [PF13602.9] 0 +dataset_4924_scaffold_987_4 dataset_4924 scaffold_987 4 3664 4371 -1 D N-(5'phosphoribosyl)anthranilate (PRA) isomerase [PF00697.25] 0 +dataset_4924_scaffold_987_5 dataset_4924 scaffold_987 5 4349 5569 -1 C K06984 beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] 0 +dataset_4924_scaffold_987_6 dataset_4924 scaffold_987 6 6068 7813 1 C K01486 adenine deaminase [EC:3.5.4.2] MER0090398 M38 MER0090398 - family M38 non-peptidase homologues (Geobacillus thermodenitrificans) [M38.UNW]#M38#{peptidase unit: 23-360}~source ABO67247~ True 0.575 374.0 7.993e-111 Adenine deaminase C-terminal domain [PF13382.9]; Amidohydrolase family [PF01979.23]; Amidohydrolase family [PF07969.14] 0 +dataset_4924_scaffold_987_7 dataset_4924 scaffold_987 7 7899 8795 1 C K22044 moderate conductance mechanosensitive channel Mechanosensitive ion channel [PF00924.21] 0 +dataset_4924_scaffold_987_8 dataset_4924 scaffold_987 8 8857 9711 1 D Family of unknown function (DUF6544) [PF20181.1] 0 +dataset_4924_scaffold_987_9 dataset_4924 scaffold_987 9 9852 10481 -1 D SOS response associated peptidase (SRAP) [PF02586.17] 0 +dataset_4924_scaffold_987_10 dataset_4924 scaffold_987 10 10721 12523 1 C K08602 oligoendopeptidase F [EC:3.4.24.-] MER0291387 M03B MER0291387 - oligopeptidase F (Desulfotomaculum gibsoniae) [M03.007]#M03B#{peptidase unit: 293-575}~source ZP_09100252~ True 0.99 594.0 6.109e-186 Peptidase family M3 [PF01432.23]; Oligopeptidase F [PF08439.13] 0 +dataset_4924_scaffold_987_11 dataset_4924 scaffold_987 11 12842 13216 1 C K07979 GntR family transcriptional regulator Bacterial regulatory proteins, gntR family [PF00392.24] 0 +dataset_4924_scaffold_987_12 dataset_4924 scaffold_987 12 13220 14086 1 D ABC transporter [PF00005.30] 0 +dataset_4924_scaffold_987_13 dataset_4924 scaffold_987 13 14079 14738 1 D ABC-2 family transporter protein [PF13346.9] 0 +dataset_4924_scaffold_987_14 dataset_4924 scaffold_987 14 14891 15028 1 E 0 +dataset_4924_scaffold_987_15 dataset_4924 scaffold_987 15 15146 15484 1 D AhpC/TSA family [PF00578.24] 0 +dataset_4924_scaffold_987_16 dataset_4924 scaffold_987 16 15631 16254 -1 D Haloacid dehalogenase-like hydrolase [PF13419.9] 0 +dataset_4924_scaffold_987_17 dataset_4924 scaffold_987 17 16464 17822 1 D 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF12838.10]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S double cluster binding domain [PF13484.9]; 4Fe-4S dicluster domain [PF13183.9]; 4Fe-4S dicluster domain [PF13534.9] 0 +dataset_4924_scaffold_987_18 dataset_4924 scaffold_987 18 17916 18152 1 E 0 +dataset_4924_scaffold_987_19 dataset_4924 scaffold_987 19 18242 20032 1 C K01486 adenine deaminase [EC:3.5.4.2] MER0128876 M38 MER0128876 - family M38 non-peptidase homologues (Desulfotomaculum acetoxidans) [M38.UNW]#M38#{peptidase unit: 28-365}~source GEBA2500491500~ True 0.685 464.0 3.63e-141 Adenine deaminase C-terminal domain [PF13382.9]; Amidohydrolase family [PF01979.23] 0 +dataset_4924_scaffold_987_20 dataset_4924 scaffold_987 20 20160 21338 -1 C K07098 uncharacterized protein Calcineurin-like phosphoesterase superfamily domain [PF12850.10]; Calcineurin-like phosphoesterase [PF00149.31] 0 +dataset_4924_scaffold_987_21 dataset_4924 scaffold_987 21 21620 22126 -1 E 0 +dataset_4924_scaffold_988_1 dataset_4924 scaffold_988 1 2 1543 1 C K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Aldehyde ferredoxin oxidoreductase, domains 2 & 3 [PF01314.21]; Aldehyde ferredoxin oxidoreductase, N-terminal domain [PF02730.18] 0 +dataset_4924_scaffold_988_2 dataset_4924 scaffold_988 2 2024 2188 -1 E 0 +dataset_4924_scaffold_988_3 dataset_4924 scaffold_988 3 2394 4376 1 C K21405 sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR Sigma-54 interaction domain [PF00158.29]; Sigma-54 interaction domain [PF14532.9]; AAA domain (dynein-related subfamily) [PF07728.17]; Bacterial regulatory protein, Fis family [PF02954.22] 0 +dataset_4924_scaffold_988_4 dataset_4924 scaffold_988 4 4895 5542 1 D Bacterial regulatory proteins, tetR family [PF00440.26] 0 +dataset_4924_scaffold_988_5 dataset_4924 scaffold_988 5 6103 7443 1 C K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Aminotransferase class-III [PF00202.24] 0 +dataset_4924_scaffold_988_6 dataset_4924 scaffold_988 6 8230 8502 1 D Antitoxin Phd_YefM, type II toxin-antitoxin system [PF02604.22] 0 +dataset_4924_scaffold_988_7 dataset_4924 scaffold_988 7 9340 10764 1 D Amino acid permease [PF13520.9]; Amino acid permease [PF00324.24] 0 +dataset_4924_scaffold_988_8 dataset_4924 scaffold_988 8 10793 11359 1 D Protein of unknown function (DUF3156) [PF11354.11] 0 +dataset_4924_scaffold_988_9 dataset_4924 scaffold_988 9 11462 12565 1 D MER0158050 S09X MER0158050 - family S9 non-peptidase homologues (Dipodomys ordii) [S09.UNW]#S09X#{peptidase unit: 54-305}~source ENSDORP00000014784~ False 0.269 87.0 1.587e-16 Neurobeachin beta propeller domain [PF20426.1]; Eukaryotic translation initiation factor eIF2A [PF08662.14]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.10]; Cytochrome D1 heme domain [PF02239.19]; WD domain, G-beta repeat [PF00400.35]; WD40-like domain [PF17005.8]; Lactonase, 7-bladed beta-propeller [PF10282.12]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.8] 0 +dataset_4924_scaffold_988_10 dataset_4924 scaffold_988 10 12655 14052 1 C K01915 glutamine synthetase [EC:6.3.1.2] Glutamine synthetase, catalytic domain [PF00120.27]; Glutamine synthetase N-terminal domain [PF16952.8]; Glutamine synthetase, beta-Grasp domain [PF03951.22] 0 +dataset_4924_scaffold_988_11 dataset_4924 scaffold_988 11 14086 14982 1 C K22081 methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] MER0459985 C44 MER0459985 - family C44 unassigned peptidases (Desulfotomaculum gibsoniae) [C44.UPW]#C44#{peptidase unit: 2-218}~source ZP_09099530~ True 0.968 445.0 6.218e-140 Glutamine amidotransferase domain [PF13522.9]; Glutamine amidotransferase domain [PF13537.9]; Glutamine amidotransferases class-II [PF13230.9] 0 +dataset_4924_scaffold_988_12 dataset_4924 scaffold_988 12 14970 15671 1 C K22082 methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] GXGXG motif [PF01493.22] 0 +dataset_4924_scaffold_988_13 dataset_4924 scaffold_988 13 15701 16999 1 C K22083 methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] Conserved region in glutamate synthase [PF01645.20]; FMN-dependent dehydrogenase [PF01070.21]; Nitronate monooxygenase [PF03060.18] 1 +dataset_4924_scaffold_988_14 dataset_4924 scaffold_988 14 17019 17342 1 D 2Fe-2S iron-sulfur cluster binding domain [PF13510.9] 0 +dataset_4924_scaffold_988_15 dataset_4924 scaffold_988 15 17339 18931 1 D Pyridine nucleotide-disulphide oxidoreductase [PF07992.17]; HI0933-like protein [PF03486.17]; NAD(P)-binding Rossmann-like domain [PF13450.9]; FAD dependent oxidoreductase [PF12831.10]; FAD binding domain [PF00890.27]; FAD binding domain [PF01494.22]; 4Fe-4S dicluster domain [PF13187.9]; 4Fe-4S dicluster domain [PF14697.9]; 4Fe-4S dicluster domain [PF13247.9]; Flavin-binding monooxygenase-like [PF00743.22]; FAD dependent oxidoreductase [PF01266.27] 0 +dataset_4924_scaffold_988_16 dataset_4924 scaffold_988 16 19221 19571 1 D Sarcosine oxidase A3 domain [PF17806.4]; BFD-like [2Fe-2S] binding domain [PF04324.18] 0 +dataset_4924_scaffold_988_17 dataset_4924 scaffold_988 17 19564 20685 1 D FAD dependent oxidoreductase [PF01266.27] 0 +dataset_4924_scaffold_988_18 dataset_4924 scaffold_988 18 20716 21117 1 C K09022 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] Endoribonuclease L-PSP [PF01042.24] 0 +dataset_4924_scaffold_988_19 dataset_4924 scaffold_988 19 21469 21915 -1 D Family of unknown function (DUF6144) [PF19641.2] 0