Mercurial > repos > iuc > duplex_family_size_distribution
changeset 3:f85557b9707a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fsd commit 156062d2b1ec95a0ab32c618046557ffbcf0c8f7
author | iuc |
---|---|
date | Mon, 22 Aug 2022 09:50:28 +0000 |
parents | 6cc65a11d922 |
children | |
files | fsd.py td.xml |
diffstat | 2 files changed, 2 insertions(+), 4 deletions(-) [+] |
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--- a/fsd.py Fri Sep 10 06:59:00 2021 +0000 +++ b/fsd.py Mon Aug 22 09:50:28 2022 +0000 @@ -26,7 +26,7 @@ def readFileReferenceFree(file): with open(file, 'r') as dest_f: data_array = numpy.genfromtxt(dest_f, skip_header=0, delimiter='\t', comments='#', dtype=str) - return(data_array) + return data_array def make_argparser():
--- a/td.xml Fri Sep 10 06:59:00 2021 +0000 +++ b/td.xml Mon Aug 22 09:50:28 2022 +0000 @@ -1,5 +1,4 @@ -<?xml version="1.0" encoding="UTF-8"?> -<tool id="td" name="TD:" version="1.0.2" profile="19.01"> +<tool id="td" name="TD:" version="1.0.3" profile="19.01"> <description>Tag distance analysis of duplex tags</description> <macros> <import>fsd_macros.xml</import> @@ -30,7 +29,6 @@ <param name="onlyDCS" type="boolean" label="Include only DCS in the analysis?" truevalue="" falsevalue="--only_DCS" checked="False" help="Include only tags forming duplex families (e.g. present in ab and ba configurations)."/> <param name="rel_freq" type="boolean" label="Relative frequency" truevalue="" falsevalue="--rel_freq" checked="False" help="If True, the relative frequencies instead of the absolute values are displayed in the plots."/> <param name="subsetTag" type="integer" label="Shorten tag in the analysis?" value="0" help="Use this parameter to simulate shorted tag lengths. Set to '0' to keep the original length. Default = 0"/> - <param name="nproc" type="integer" label="Number of processors" value="8" help="Number of processor used for computing."/> <param name="nr_above_bars" type="boolean" label="Include numbers above bars?" truevalue="--nr_above_bars" falsevalue="" checked="True" help="The absolute and relative values of the data can be included or removed from the plots. "/> </inputs> <outputs>