# HG changeset patch
# User iuc
# Date 1624734593 0
# Node ID 6e53e565fc6a9261cd53e65b72d71344dbac41c0
# Parent  3d89af8a44f05e109b991528d0d49764fdc539c4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/edger commit 8c4b8f8711df0a4d6fa98fa8a6f91b977395d62c"

diff -r 3d89af8a44f0 -r 6e53e565fc6a edger.R
--- a/edger.R	Thu Jun 03 19:34:18 2021 +0000
+++ b/edger.R	Sat Jun 26 19:09:53 2021 +0000
@@ -277,7 +277,7 @@
 
   # Process factors
   if (is.null(opt$factInput)) {
-    factordata <- read.table(opt$factFile, header = TRUE, sep = "\t", strip.white = TRUE)
+    factordata <- read.table(opt$factFile, header = TRUE, sep = "\t", strip.white = TRUE, stringsAsFactors = TRUE)
     # check samples names match
     if (!any(factordata[, 1] %in% colnames(counts))) {
       stop("Sample IDs in factors file and count matrix don't match")
diff -r 3d89af8a44f0 -r 6e53e565fc6a edger.xml
--- a/edger.xml	Thu Jun 03 19:34:18 2021 +0000
+++ b/edger.xml	Sat Jun 26 19:09:53 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="edger" name="edgeR" version="3.34.0">
+<tool id="edger" name="edgeR" version="3.34.0+galaxy1">
     <description>
         Perform differential expression of count data
     </description>