diff test-data/est2genome.gff @ 0:f48ed38dfddf draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
author iuc
date Thu, 02 Aug 2018 09:11:30 -0400
parents
children a03dead1bede
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/est2genome.gff	Thu Aug 02 09:11:30 2018 -0400
@@ -0,0 +1,37 @@
+# --- START OF GFF DUMP ---
+#
+#
+##gff-version 2
+##source-version exonerate:est2genome 2.4.0
+##date 2018-08-02
+##type DNA
+#
+#
+# seqname source feature start end score strand frame attributes
+#
+sample	exonerate:est2genome	gene	2742	2819	102	-	.	gene_id 1 ; sequence sample ; gene_orientation . ; identity 58.97 ; similarity 58.97
+sample	exonerate:est2genome	exon	2742	2819	.	-	.	insertions 0 ; deletions 0 ; identity 58.97 ; similarity 58.97
+sample	exonerate:est2genome	similarity	2742	2819	102	-	.	alignment_id 1 ; Query sample ; Align 2820 1168 78
+# --- END OF GFF DUMP ---
+#
+# --- START OF GFF DUMP ---
+#
+#
+##gff-version 2
+##source-version exonerate:est2genome 2.4.0
+##date 2018-08-02
+##type DNA
+#
+#
+# seqname source feature start end score strand frame attributes
+#
+sample	exonerate:est2genome	gene	758	3050	7309	+	.	gene_id 1 ; sequence sample ; gene_orientation + ; identity 99.93 ; similarity 99.93
+sample	exonerate:est2genome	utr5	758	1332	.	+	.	
+sample	exonerate:est2genome	exon	758	1332	.	+	.	insertions 0 ; deletions 2 ; identity 99.83 ; similarity 99.83
+sample	exonerate:est2genome	splice5	1333	1334	.	+	.	intron_id 1 ; splice_site "TT"
+sample	exonerate:est2genome	intron	1333	2151	.	+	.	intron_id 1
+sample	exonerate:est2genome	splice3	2150	2151	.	+	.	intron_id 0 ; splice_site "AT"
+sample	exonerate:est2genome	exon	2152	3050	.	+	.	insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00
+sample	exonerate:est2genome	similarity	758	3050	7309	+	.	alignment_id 1 ; Query sample ; Align 758 1 572 ; Align 1330 575 3 ; Align 2152 578 899
+# --- END OF GFF DUMP ---
+#