view test-data/contigs/hmmsearchresults/retrieved-genes-class_B_1_2-hmmsearched.out @ 2:b982a9ea939c draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fargene commit d5aed24826ee23758798b458334b2f5e7c84eb0f

#                                                                                                  --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name                        accession   tlen query name                 accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#                ------------------- ---------- -----       -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
klebsiella_plasmid_FN396876.1_seq1_4 -            261 b1_b2_70_centroids-aligned -            248   3.1e-84  270.9   0.0   1   1   5.6e-85   3.4e-84  270.7   0.0     7   244     7   258     1   260 0.94 -
#
# Program:         hmmsearch
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SEARCH
# Query file:      /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm
# Target file:     /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_2/tmpdir/retrieved-translated.fasta
# Option settings: hmmsearch --domtblout /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_2/hmmsearchresults/retrieved-genes-class_B_1_2-hmmsearched.out -E 1000 --domE 1000 /home/ubuntu/data/miniconda2/envs/fargene/lib/python2.7/site-packages/fargene_analysis/models/class_B_1_2.hmm /home/ubuntu/data/fargene/tutorial/tutorialdata/tutorial_output_2/tmpdir/retrieved-translated.fasta 
# Current dir:     /home/ubuntu/data/fargene/tutorial/tutorialdata
# Date:            Wed Jul 17 13:17:48 2019
# [ok]