view macros.xml @ 0:988729b728f0 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit 2e41f5d3dd8201a5f8295ec30095c508250a8304

<macros>
    <token name="@WRAPPER_VERSION@">0.12.4</token>

    <xml name="adapter_sequence1">
        <param name="adapter_sequence1" argument="--adapter_sequence" type="text" optional="true" label="Adapter sequence for input 1"
            help="The adapter for read1. For SE data, if not specified, the adapter will be auto-detected. For PE data, this is used if R1/R2 are found not overlapped.">
            <sanitizer>
                <valid>
                    <add value="A"/>
                    <add value="T"/>
                    <add value="C"/>
                    <add value="G"/>
                </valid>
            </sanitizer>
        </param>
    </xml>
    <xml name="in1">
        <param name="in1" argument="-i" type="data" format="fastq,fastq.gz" label="Input 1" help="Input FASTQ file #1"/>
    </xml>
    <xml name="poly_g_min_len">
        <param name="poly_g_min_len" argument="--poly_g_min_len" type="integer" optional="true" label="PolyG minimum length"
            help="The minimum length to detect polyG in the read tail. 10 by default."/>
    </xml>

</macros>