# HG changeset patch # User iuc # Date 1559053139 14400 # Node ID 1d8fe9bc4cb09ac849ace812a8bc59b4fe7e2006 # Parent 6c2351178f8da8baf8596e69832078e54b5870c2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit 6e59980ea50d84a849190460ae44c055f643355f diff -r 6c2351178f8d -r 1d8fe9bc4cb0 fastp.xml --- a/fastp.xml Wed Jan 16 04:02:33 2019 -0500 +++ b/fastp.xml Tue May 28 10:18:59 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@"> +<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@+galaxy1"> <description>- fast all-in-one preprocessing for FASTQ files</description> <macros> <import>macros.xml</import> @@ -314,19 +314,19 @@ </inputs> <outputs> - <data name="out1" format_source="in1" label="${tool.name} on ${on_string}: Read 1 Output"> + <data name="out1" format_source="in1" label="${tool.name} on ${on_string}: Read 1 output"> <filter>single_paired['single_paired_selector'] in ["single", "paired"]</filter> </data> - <data name="out2" format_source="in2" label="${tool.name} on ${on_string}: Read 2 Output"> + <data name="out2" format_source="in2" label="${tool.name} on ${on_string}: Read 2 output"> <filter>single_paired['single_paired_selector'] == "paired"</filter> </data> - <collection name="output_paired_coll" type="paired" structured_like="paired_input" inherit_format="true" label="Paired-end output of ${tool.name} on ${on_string}"> + <collection name="output_paired_coll" type="paired" format_source="paired_input['forward']" label="${tool.name} on ${on_string}: Paired-end output"> <filter>single_paired['single_paired_selector'] == "paired_collection"</filter> </collection> - <data name="report_html" format="html" from_work_dir="fastp.html" label="${tool.name} on ${on_string}: HTML Report"> + <data name="report_html" format="html" from_work_dir="fastp.html" label="${tool.name} on ${on_string}: HTML report"> <filter>output_options['report_html'] is True</filter> </data> - <data name="report_json" format="json" from_work_dir="fastp.json" label="${tool.name} on ${on_string}: JSON Report"> + <data name="report_json" format="json" from_work_dir="fastp.json" label="${tool.name} on ${on_string}: JSON report"> <filter>output_options['report_json'] is True</filter> </data> </outputs>