Mercurial > repos > iuc > featurecounts
comparison featurecounts.xml @ 1:c7bd0cc53524 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/featurecounts commit 74e6b17b1a94bc6de47d7cbcf9548a9367b02d56
| author | iuc |
|---|---|
| date | Fri, 23 Sep 2016 10:06:45 -0400 |
| parents | 9e7a369eec58 |
| children | a80f96e55958 |
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| 0:9e7a369eec58 | 1:c7bd0cc53524 |
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| 432 - http://genome.ucsc.edu/FAQ/FAQformat.html#format3 | 432 - http://genome.ucsc.edu/FAQ/FAQformat.html#format3 |
| 433 - http://www.ensembl.org/info/website/upload/gff.html | 433 - http://www.ensembl.org/info/website/upload/gff.html |
| 434 | 434 |
| 435 Output format | 435 Output format |
| 436 ------------- | 436 ------------- |
| 437 FeatureCounts produces a table containing the counted reads, per gene, per row. Optionally the last column can be set to be the effective gene-length. These tables are compatible with the DESeq2 Galaxy wrapper by IUC. | 437 FeatureCounts produces a table containing counted reads, per gene, per row. Optionally the last column can be set to be the effective gene-length. These tables are compatible with the DESeq2 Galaxy wrapper by IUC. Column names are added as metadata object. |
| 438 ]]></help> | 438 ]]></help> |
| 439 <citations> | 439 <citations> |
| 440 <citation type="doi">10.1093/bioinformatics/btt656</citation> | 440 <citation type="doi">10.1093/bioinformatics/btt656</citation> |
| 441 </citations> | 441 </citations> |
| 442 </tool> | 442 </tool> |