comparison filter_tabular.py @ 13:4d5aae46f850 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/query_tabular commit 35576d64a12fa664d72559172c5960c09da2b632"

12:37cde8134c6a

                      help='Input file for filtering')
    parser.add_option('-j', '--jsonfile', dest='jsonfile', default=None,
                      help='JSON array of filter specifications')
    parser.add_option('-o', '--output', dest='output', default=None,
                      help='Output file for query results')
    parser.add_option('-v', '--verbose', dest='verbose', default=False,
                      action='store_true',
                      help='verbose')
    (options, args) = parser.parse_args()

                  ['%s: %s' % (k, f[k])
                   for k in set(f.keys()) - set(['filter'])])),
                  file=sys.stdout)

    try:
        filter_file(inputFile, outputFile, filters=filters)
    except Exception as e:
        exit('Error: %s' % (e))


if __name__ == "__main__":

13:4d5aae46f850

                      help='Input file for filtering')
    parser.add_option('-j', '--jsonfile', dest='jsonfile', default=None,
                      help='JSON array of filter specifications')
    parser.add_option('-o', '--output', dest='output', default=None,
                      help='Output file for query results')
    parser.add_option('-c', '--comment_char)', dest='comment_char', default=None,
                      help='Line comment character')
    parser.add_option('-v', '--verbose', dest='verbose', default=False,
                      action='store_true',
                      help='verbose')
    (options, args) = parser.parse_args()

                  ['%s: %s' % (k, f[k])
                   for k in set(f.keys()) - set(['filter'])])),
                  file=sys.stdout)

    try:
        filter_file(inputFile, outputFile, comment_char=options.comment_char, filters=filters)
    except Exception as e:
        exit('Error: %s' % (e))


if __name__ == "__main__":