Mercurial > repos > iuc > flair
view test-data/UCSC_Main_on_Human_knownGene_region_chrM.gtf @ 0:5d17cf201540 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/flair commit b80808c3c53775c3f323581efb44d124d6e8bd1a"
| author | iuc |
|---|---|
| date | Fri, 27 Nov 2020 18:45:47 +0000 |
| parents | |
| children |
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chrM hg38_knownGene exon 577 647 0.000000 + . gene_id "ENST00000387314.1"; transcript_id "ENST00000387314.1"; chrM hg38_knownGene exon 648 1601 0.000000 + . gene_id "ENST00000389680.2"; transcript_id "ENST00000389680.2"; chrM hg38_knownGene exon 1602 1670 0.000000 + . gene_id "ENST00000387342.1"; transcript_id "ENST00000387342.1"; chrM hg38_knownGene exon 1671 3229 0.000000 + . gene_id "ENST00000387347.2"; transcript_id "ENST00000387347.2"; chrM hg38_knownGene exon 3230 3304 0.000000 + . gene_id "ENST00000386347.1"; transcript_id "ENST00000386347.1"; chrM hg38_knownGene start_codon 3307 3309 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2"; chrM hg38_knownGene CDS 3307 4259 0.000000 + 0 gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2"; chrM hg38_knownGene stop_codon 4260 4262 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2"; chrM hg38_knownGene exon 3307 4262 0.000000 + . gene_id "ENST00000361390.2"; transcript_id "ENST00000361390.2"; chrM hg38_knownGene exon 4263 4331 0.000000 + . gene_id "ENST00000387365.1"; transcript_id "ENST00000387365.1"; chrM hg38_knownGene exon 4329 4400 0.000000 - . gene_id "ENST00000387372.1"; transcript_id "ENST00000387372.1"; chrM hg38_knownGene exon 4402 4469 0.000000 + . gene_id "ENST00000387377.1"; transcript_id "ENST00000387377.1"; chrM hg38_knownGene start_codon 4470 4472 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3"; chrM hg38_knownGene CDS 4470 5508 0.000000 + 0 gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3"; chrM hg38_knownGene stop_codon 5509 5511 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3"; chrM hg38_knownGene exon 4470 5511 0.000000 + . gene_id "ENST00000361453.3"; transcript_id "ENST00000361453.3"; chrM hg38_knownGene exon 5512 5579 0.000000 + . gene_id "ENST00000387382.1"; transcript_id "ENST00000387382.1"; chrM hg38_knownGene exon 5587 5655 0.000000 - . gene_id "ENST00000387392.1"; transcript_id "ENST00000387392.1"; chrM hg38_knownGene exon 5657 5729 0.000000 - . gene_id "ENST00000387400.1"; transcript_id "ENST00000387400.1"; chrM hg38_knownGene exon 5761 5826 0.000000 - . gene_id "ENST00000387405.1"; transcript_id "ENST00000387405.1"; chrM hg38_knownGene exon 5826 5891 0.000000 - . gene_id "ENST00000387409.1"; transcript_id "ENST00000387409.1"; chrM hg38_knownGene start_codon 5904 5906 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2"; chrM hg38_knownGene CDS 5904 7442 0.000000 + 0 gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2"; chrM hg38_knownGene stop_codon 7443 7445 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2"; chrM hg38_knownGene exon 5904 7445 0.000000 + . gene_id "ENST00000361624.2"; transcript_id "ENST00000361624.2"; chrM hg38_knownGene exon 7446 7514 0.000000 - . gene_id "ENST00000387416.2"; transcript_id "ENST00000387416.2"; chrM hg38_knownGene exon 7518 7585 0.000000 + . gene_id "ENST00000387419.1"; transcript_id "ENST00000387419.1"; chrM hg38_knownGene start_codon 7586 7588 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1"; chrM hg38_knownGene CDS 7586 8266 0.000000 + 0 gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1"; chrM hg38_knownGene stop_codon 8267 8269 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1"; chrM hg38_knownGene exon 7586 8269 0.000000 + . gene_id "ENST00000361739.1"; transcript_id "ENST00000361739.1"; chrM hg38_knownGene exon 8295 8364 0.000000 + . gene_id "ENST00000387421.1"; transcript_id "ENST00000387421.1"; chrM hg38_knownGene start_codon 8366 8368 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1"; chrM hg38_knownGene CDS 8366 8569 0.000000 + 0 gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1"; chrM hg38_knownGene stop_codon 8570 8572 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1"; chrM hg38_knownGene exon 8366 8572 0.000000 + . gene_id "ENST00000361851.1"; transcript_id "ENST00000361851.1"; chrM hg38_knownGene start_codon 8527 8529 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2"; chrM hg38_knownGene CDS 8527 9204 0.000000 + 0 gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2"; chrM hg38_knownGene stop_codon 9205 9207 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2"; chrM hg38_knownGene exon 8527 9207 0.000000 + . gene_id "ENST00000361899.2"; transcript_id "ENST00000361899.2"; chrM hg38_knownGene start_codon 9207 9209 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2"; chrM hg38_knownGene CDS 9207 9987 0.000000 + 0 gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2"; chrM hg38_knownGene stop_codon 9988 9990 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2"; chrM hg38_knownGene exon 9207 9990 0.000000 + . gene_id "ENST00000362079.2"; transcript_id "ENST00000362079.2"; chrM hg38_knownGene exon 9991 10058 0.000000 + . gene_id "ENST00000387429.1"; transcript_id "ENST00000387429.1"; chrM hg38_knownGene start_codon 10059 10061 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2"; chrM hg38_knownGene CDS 10059 10401 0.000000 + 0 gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2"; chrM hg38_knownGene stop_codon 10402 10404 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2"; chrM hg38_knownGene exon 10059 10404 0.000000 + . gene_id "ENST00000361227.2"; transcript_id "ENST00000361227.2"; chrM hg38_knownGene exon 10405 10469 0.000000 + . gene_id "ENST00000387439.1"; transcript_id "ENST00000387439.1"; chrM hg38_knownGene start_codon 10470 10472 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1"; chrM hg38_knownGene CDS 10470 10763 0.000000 + 0 gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1"; chrM hg38_knownGene stop_codon 10764 10766 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1"; chrM hg38_knownGene exon 10470 10766 0.000000 + . gene_id "ENST00000361335.1"; transcript_id "ENST00000361335.1"; chrM hg38_knownGene start_codon 10760 10762 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2"; chrM hg38_knownGene CDS 10760 12134 0.000000 + 0 gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2"; chrM hg38_knownGene stop_codon 12135 12137 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2"; chrM hg38_knownGene exon 10760 12137 0.000000 + . gene_id "ENST00000361381.2"; transcript_id "ENST00000361381.2"; chrM hg38_knownGene exon 12138 12206 0.000000 + . gene_id "ENST00000387441.1"; transcript_id "ENST00000387441.1"; chrM hg38_knownGene exon 12207 12265 0.000000 + . gene_id "ENST00000387449.1"; transcript_id "ENST00000387449.1"; chrM hg38_knownGene exon 12266 12336 0.000000 + . gene_id "ENST00000387456.1"; transcript_id "ENST00000387456.1"; chrM hg38_knownGene start_codon 12337 12339 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2"; chrM hg38_knownGene CDS 12337 14145 0.000000 + 0 gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2"; chrM hg38_knownGene stop_codon 14146 14148 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2"; chrM hg38_knownGene exon 12337 14148 0.000000 + . gene_id "ENST00000361567.2"; transcript_id "ENST00000361567.2"; chrM hg38_knownGene stop_codon 14149 14151 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2"; chrM hg38_knownGene CDS 14152 14673 0.000000 - 0 gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2"; chrM hg38_knownGene start_codon 14671 14673 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2"; chrM hg38_knownGene exon 14149 14673 0.000000 - . gene_id "ENST00000361681.2"; transcript_id "ENST00000361681.2"; chrM hg38_knownGene exon 14674 14742 0.000000 - . gene_id "ENST00000387459.1"; transcript_id "ENST00000387459.1"; chrM hg38_knownGene start_codon 14747 14749 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2"; chrM hg38_knownGene CDS 14747 15884 0.000000 + 0 gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2"; chrM hg38_knownGene stop_codon 15885 15887 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2"; chrM hg38_knownGene exon 14747 15887 0.000000 + . gene_id "ENST00000361789.2"; transcript_id "ENST00000361789.2"; chrM hg38_knownGene exon 15888 15953 0.000000 + . gene_id "ENST00000387460.2"; transcript_id "ENST00000387460.2"; chrM hg38_knownGene exon 15956 16023 0.000000 - . gene_id "ENST00000387461.2"; transcript_id "ENST00000387461.2";