Mercurial > repos > iuc > funannotate_annotate

annotate test-data/funannotate_db/Pfam-A.clans.tsv @ 5:9feee7fc49a1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2589d2785ca90160a22a5fe14e03311e189ea51d
author iuc
date Thu, 13 Apr 2023 17:13:04 +0000
parents a5baa4ff168d
children
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a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
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1 PF00001 CL0192 GPCR_A 7tm_1 7 transmembrane receptor (rhodopsin family)
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
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2 PF00002 CL0192 GPCR_A 7tm_2 7 transmembrane receptor (Secretin family)
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iuc
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3 PF00003 CL0192 GPCR_A 7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR
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iuc
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4 PF00004 CL0023 P-loop_NTPase AAA ATPase family associated with various cellular activities (AAA)
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
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5 PF00005 CL0023 P-loop_NTPase ABC_tran ABC transporter
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iuc
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6 PF00006 CL0023 P-loop_NTPase ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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7 PF00007 CL0079 Cystine-knot Cys_knot Cystine-knot domain
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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8 PF00008 CL0001 EGF EGF EGF-like domain
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iuc
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9 PF00009 CL0023 P-loop_NTPase GTP_EFTU Elongation factor Tu GTP binding domain
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iuc
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10 PF00010 HLH Helix-loop-helix DNA-binding domain
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iuc
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11 PF00011 CL0190 HSP20 HSP20 Hsp20/alpha crystallin family
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12 PF00012 CL0108 Actin_ATPase HSP70 Hsp70 protein
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13 PF00013 CL0007 KH KH_1 KH domain
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iuc
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14 PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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15 PF00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signalling domain
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
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16 PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain
a5baa4ff168d "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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17 PF00017 CL0541 SH2-like SH2 SH2 domain
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18 PF00018 CL0010 SH3 SH3_1 SH3 domain
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19 PF00019 CL0079 Cystine-knot TGF_beta Transforming growth factor beta like domain
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20 PF00020 CL0607 TNF_receptor TNFR_c6 TNFR/NGFR cysteine-rich region
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21 PF00021 CL0117 uPAR_Ly6_toxin UPAR_LY6 u-PAR/Ly-6 domain
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22 PF00022 CL0108 Actin_ATPase Actin Actin
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23 PF00023 CL0465 Ank Ank Ankyrin repeat
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24 PF00024 CL0168 PAN PAN_1 PAN domain
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25 PF00025 CL0023 P-loop_NTPase Arf ADP-ribosylation factor family
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26 PF00026 CL0129 Peptidase_AA Asp Eukaryotic aspartyl protease
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27 PF00027 CL0029 Cupin cNMP_binding Cyclic nucleotide-binding domain
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28 PF00028 CL0159 E-set Cadherin Cadherin domain
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29 PF00029 CL0375 Transporter Connexin Connexin
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30 PF00030 CL0333 gCrystallin Crystall Beta/Gamma crystallin
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31 PF00031 CL0121 Cystatin Cystatin Cystatin domain