Mercurial > repos > iuc > funannotate_annotate

diff funannotate_annotate.xml @ 6:582fd74dc2a1 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2c4f8172c3f452e1119b3d528c97da382750adeb
author: iuc
date: Tue, 25 Apr 2023 18:29:19 +0000
parents: 14f588312c56
children: b6b5cd37f2a2
--- a/funannotate_annotate.xml	Thu Apr 13 17:13:04 2023 +0000
+++ b/funannotate_annotate.xml	Tue Apr 25 18:29:19 2023 +0000
@@ -8,6 +8,12 @@
     </requirements>
     <version_command>funannotate check --show-versions</version_command>
     <command><![CDATA[
+## Needed by some subprocess invoked internally
+## https://github.com/nextgenusfs/funannotate/issues/905
+export FUNANNOTATE_DB='$database.fields.path'
+
+&&
+
 funannotate annotate
 
 #if $input.input_type == 'gbk'