Mercurial > repos > iuc > funannotate_clean

annotate test-data/funannotate_db/Pfam-A.clans.tsv @ 5:73428a792541 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 8307455ce2bb36981fee509f556ff17c227a9d8a
author iuc
date Sun, 22 Jan 2023 17:32:13 +0000
parents 6298bb90475b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
1 PF00001 CL0192 GPCR_A 7tm_1 7 transmembrane receptor (rhodopsin family)
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
2 PF00002 CL0192 GPCR_A 7tm_2 7 transmembrane receptor (Secretin family)
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
3 PF00003 CL0192 GPCR_A 7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
4 PF00004 CL0023 P-loop_NTPase AAA ATPase family associated with various cellular activities (AAA)
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
5 PF00005 CL0023 P-loop_NTPase ABC_tran ABC transporter
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
6 PF00006 CL0023 P-loop_NTPase ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
7 PF00007 CL0079 Cystine-knot Cys_knot Cystine-knot domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
8 PF00008 CL0001 EGF EGF EGF-like domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
9 PF00009 CL0023 P-loop_NTPase GTP_EFTU Elongation factor Tu GTP binding domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
10 PF00010 HLH Helix-loop-helix DNA-binding domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
11 PF00011 CL0190 HSP20 HSP20 Hsp20/alpha crystallin family
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
12 PF00012 CL0108 Actin_ATPase HSP70 Hsp70 protein
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
13 PF00013 CL0007 KH KH_1 KH domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
14 PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
15 PF00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signalling domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
16 PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
17 PF00017 CL0541 SH2-like SH2 SH2 domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
18 PF00018 CL0010 SH3 SH3_1 SH3 domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
19 PF00019 CL0079 Cystine-knot TGF_beta Transforming growth factor beta like domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
20 PF00020 CL0607 TNF_receptor TNFR_c6 TNFR/NGFR cysteine-rich region
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
21 PF00021 CL0117 uPAR_Ly6_toxin UPAR_LY6 u-PAR/Ly-6 domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
22 PF00022 CL0108 Actin_ATPase Actin Actin
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
23 PF00023 CL0465 Ank Ank Ankyrin repeat
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
24 PF00024 CL0168 PAN PAN_1 PAN domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
25 PF00025 CL0023 P-loop_NTPase Arf ADP-ribosylation factor family
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
26 PF00026 CL0129 Peptidase_AA Asp Eukaryotic aspartyl protease
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
27 PF00027 CL0029 Cupin cNMP_binding Cyclic nucleotide-binding domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
28 PF00028 CL0159 E-set Cadherin Cadherin domain
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
29 PF00029 CL0375 Transporter Connexin Connexin
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
30 PF00030 CL0333 gCrystallin Crystall Beta/Gamma crystallin
6298bb90475b "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff changeset
31 PF00031 CL0121 Cystatin Cystatin Cystatin domain