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annotate README.md @ 2:3187e8a44739 draft

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"planemo upload commit 9cbeba115a6e13dd4c007065b7d77dcb400f72fb"
author iuc
date Thu, 25 Nov 2021 09:43:48 +0000
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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1 # Funannotate
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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3 Funannotate can use GeneMark to predict gene, but due to licensing issues, we are not allowed to distribute GeneMark automatically.
857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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5 If you want to use it, the Galaxy administrator needs to install it GeneMark following the instructions on https://github.com/nextgenusfs/funannotate, and set the `GENEMARK_PATH` variable on the job destination.