Mercurial > repos > iuc > funannotate_compare
annotate README.md @ 5:a7ce2601500c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2589d2785ca90160a22a5fe14e03311e189ea51d
author | iuc |
---|---|
date | Thu, 13 Apr 2023 17:13:56 +0000 |
parents | 857f7ac611e1 |
children |
rev | line source |
---|---|
0
857f7ac611e1
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff
changeset
|
1 # Funannotate |
857f7ac611e1
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff
changeset
|
2 |
857f7ac611e1
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff
changeset
|
3 Funannotate can use GeneMark to predict gene, but due to licensing issues, we are not allowed to distribute GeneMark automatically. |
857f7ac611e1
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff
changeset
|
4 |
857f7ac611e1
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
iuc
parents:
diff
changeset
|
5 If you want to use it, the Galaxy administrator needs to install it GeneMark following the instructions on https://github.com/nextgenusfs/funannotate, and set the `GENEMARK_PATH` variable on the job destination. |