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annotate README.md @ 11:0418d28136de draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 9e3708d04faea0f1be4ea8918e859d6f2c7eb31d
author iuc
date Wed, 26 Jun 2024 09:38:43 +0000
parents 857f7ac611e1
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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1 # Funannotate
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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3 Funannotate can use GeneMark to predict gene, but due to licensing issues, we are not allowed to distribute GeneMark automatically.
857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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857f7ac611e1 "planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
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5 If you want to use it, the Galaxy administrator needs to install it GeneMark following the instructions on https://github.com/nextgenusfs/funannotate, and set the `GENEMARK_PATH` variable on the job destination.