Mercurial > repos > iuc > gatk2
comparison variant_combine.xml @ 4:f244b8209eb8 draft
bug fix release
| author | iuc |
|---|---|
| date | Mon, 25 Aug 2014 17:43:11 -0400 |
| parents | 340633249b3d |
| children | 35c00763cb5c |
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| 3:2553f84b8174 | 4:f244b8209eb8 |
|---|---|
| 1 <tool id="gatk2_variant_combine" name="Combine Variants" version="0.0.7"> | 1 <tool id="gatk2_variant_combine" name="Combine Variants" version="@VERSION@.0"> |
| 2 <description></description> | 2 <description></description> |
| 3 <expand macro="requirements" /> | 3 <expand macro="requirements" /> |
| 4 <macros> | 4 <macros> |
| 5 <import>gatk2_macros.xml</import> | 5 <import>gatk2_macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 165 assumeIdenticalSamples If true, assume input VCFs have identical sample sets and disjoint calls so that one can simply perform a merge sort to combine the VCFs into one, drastically reducing the runtime. | 165 assumeIdenticalSamples If true, assume input VCFs have identical sample sets and disjoint calls so that one can simply perform a merge sort to combine the VCFs into one, drastically reducing the runtime. |
| 166 minimumN Combine variants and output site only if variant is present in at least N input files. | 166 minimumN Combine variants and output site only if variant is present in at least N input files. |
| 167 | 167 |
| 168 @CITATION_SECTION@ | 168 @CITATION_SECTION@ |
| 169 </help> | 169 </help> |
| 170 <expand macro="citations" /> | |
| 170 </tool> | 171 </tool> |