Mercurial > repos > iuc > gatk2
comparison variant_combine.xml @ 4:f244b8209eb8 draft
bug fix release
author | iuc |
---|---|
date | Mon, 25 Aug 2014 17:43:11 -0400 |
parents | 340633249b3d |
children | 35c00763cb5c |
comparison
equal
deleted
inserted
replaced
3:2553f84b8174 | 4:f244b8209eb8 |
---|---|
1 <tool id="gatk2_variant_combine" name="Combine Variants" version="0.0.7"> | 1 <tool id="gatk2_variant_combine" name="Combine Variants" version="@VERSION@.0"> |
2 <description></description> | 2 <description></description> |
3 <expand macro="requirements" /> | 3 <expand macro="requirements" /> |
4 <macros> | 4 <macros> |
5 <import>gatk2_macros.xml</import> | 5 <import>gatk2_macros.xml</import> |
6 </macros> | 6 </macros> |
165 assumeIdenticalSamples If true, assume input VCFs have identical sample sets and disjoint calls so that one can simply perform a merge sort to combine the VCFs into one, drastically reducing the runtime. | 165 assumeIdenticalSamples If true, assume input VCFs have identical sample sets and disjoint calls so that one can simply perform a merge sort to combine the VCFs into one, drastically reducing the runtime. |
166 minimumN Combine variants and output site only if variant is present in at least N input files. | 166 minimumN Combine variants and output site only if variant is present in at least N input files. |
167 | 167 |
168 @CITATION_SECTION@ | 168 @CITATION_SECTION@ |
169 </help> | 169 </help> |
170 <expand macro="citations" /> | |
170 </tool> | 171 </tool> |