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view test-data/gatk/gatk_unified_genotyper/gatk_unified_genotyper_out_1.log.contains @ 0:340633249b3d draft
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author | bgruening |
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date | Mon, 02 Dec 2013 06:18:36 -0500 |
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Program Args: -T UnifiedGenotyper GenomeAnalysisEngine - Strictness is SILENT TraversalEngine - [INITIALIZATION COMPLETE; TRAVERSAL STARTING] TraversalEngine - Location processed.sites runtime per.1M.sites completed total.runtime remaining UnifiedGenotyper - Visited bases 5387 UnifiedGenotyper - Callable bases 5344 UnifiedGenotyper - Confidently called bases 5344 UnifiedGenotyper - % callable bases of all loci 99.202 UnifiedGenotyper - % confidently called bases of all loci 99.202 UnifiedGenotyper - % confidently called bases of callable loci 100.000 UnifiedGenotyper - Actual calls made 1 TraversalEngine - Total runtime