Mercurial > repos > iuc > gecko

annotate test-data/hyopneumoniae_16S-flocculare_16S.csv @ 3:1de657a3198d draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit b55cfca7f53d2eaa3f4c7c4ce09436371b088000
author iuc
date Sat, 05 Oct 2024 16:31:40 +0000
parents 09459f6ffe08
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
1 All by-Identity Ungapped Fragments (Hits based approach)
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
2 [Abr.98/Apr.2010/Dec.2011 -- <ortrelles@uma.es>
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
3 SeqX filename : hyopneumoniae_16S.fasta
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
4 SeqY filename : flocculare_16S.fasta
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
5 SeqX name : Y00149.1
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
6 SeqY name : GU227405.1
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
7 SeqX length : 1537
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
8 SeqY length : 1448
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
9 Min.fragment.length : 20
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
10 Min.Identity : 50
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
11 Tot Hits (seeds) : 149
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
12 Tot Hits (seeds) used: 71
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
13 Total fragments : 4
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
14 ========================================================
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
15 Total CSB: 0
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
16 ========================================================
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
17 Type,xStart,yStart,xEnd,yEnd,strand(f/r),block,length,score,ident,similarity,%ident,SeqX,SeqY
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
18 Frag,219,193,1442,1416,f,0,1224,4664,1195,95.26,97.63,0,0
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
19 Frag,94,66,214,186,f,0,121,420,113,86.78,93.39,0,0
09459f6ffe08 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gecko commit f0c70444d9781900f0af1638792818543c65acfc"
iuc
parents:
diff changeset
20 Frag,53,17,75,39,f,0,23,84,22,91.30,95.65,0,0