# HG changeset patch
# User iuc
# Date 1458697322 14400
# Node ID 37f9901b674d38347f531cb53cab294efc1635f4
# Parent  8295781a3c27062872dc6b2fe4cab654d292a12e
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gemini commit 7867095d83e5d0e0f923de7e9720d59df0034817

diff -r 8295781a3c27 -r 37f9901b674d gemini_fusions.xml
--- a/gemini_fusions.xml	Thu Feb 18 08:53:02 2016 -0500
+++ b/gemini_fusions.xml	Tue Mar 22 21:42:02 2016 -0400
@@ -10,12 +10,11 @@
     <command>
 <![CDATA[
 
-        gemini @BINARY@
-
+        gemini
         #if $annotation_databases:
             --annotation-dir "${ annotation_databases.fields.path }"
         #end if
-
+        @BINARY@
         $in_cosmic_census
         
         #if float($min_quality) >= 0:
diff -r 8295781a3c27 -r 37f9901b674d gemini_macros.xml
--- a/gemini_macros.xml	Thu Feb 18 08:53:02 2016 -0500
+++ b/gemini_macros.xml	Tue Mar 22 21:42:02 2016 -0400
@@ -2,6 +2,7 @@
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="0.18.1">gemini</requirement>
+            <requirement type="package" version="0.2.6">tabix</requirement>
             <yield />
         </requirements>
     </xml>
diff -r 8295781a3c27 -r 37f9901b674d tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Feb 18 08:53:02 2016 -0500
+++ b/tool_dependencies.xml	Tue Mar 22 21:42:02 2016 -0400
@@ -1,6 +1,9 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="gemini" version="0.18.1">
-        <repository changeset_revision="be869e11582f" name="package_gemini_0_18_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="49de32b47548" name="package_gemini_0_18_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="tabix" version="0.2.6">
+        <repository changeset_revision="389d2376b60b" name="package_tabix_0_2_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>