Mercurial > repos > iuc > gemini_gene_wise

diff gemini_gene_wise.xml @ 4:a26f0a30df65 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:55:02 -0500
parents d46017ddbf94
children 4b26f6c99227
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--- a/gemini_gene_wise.xml	Wed Oct 17 13:29:48 2018 -0400
+++ b/gemini_gene_wise.xml	Fri Dec 14 12:55:02 2018 -0500
@@ -1,4 +1,4 @@
-<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0">
+<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
     <description>Custom genotype filtering by gene</description>
     <macros>
         <import>gemini_macros.xml</import>
@@ -47,7 +47,11 @@
         <test>
             <param name="infile" value="gemini_amend_input.db" ftype="gemini.sqlite" />
             <param name="gt_filter" value="((gt_depths).(*).(>=1).(all))" />
-            <output name="outfile" file="gemini_gene_wise_result.tabular" />
+            <output name="outfile">
+                <assert_contents>
+                    <has_line_matching expression="chrom&#009;start&#009;end&#009;gene.*" />
+                </assert_contents>
+            </output>
         </test>
     </tests>
     <help>