Mercurial > repos > iuc > gemini_region
diff test-data/test-cache/gemini/data/summary_gene_table_v75 @ 4:601b70d10d92 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
| author | iuc |
|---|---|
| date | Fri, 14 Dec 2018 12:44:11 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test-cache/gemini/data/summary_gene_table_v75 Fri Dec 14 12:44:11 2018 -0500 @@ -0,0 +1,23 @@ +Chromosome Gene_name Is_hgnc Ensembl_gene_id HGNC_id Synonyms Rvis_pct Strand Transcript_min_start Transcript_max_end Mammalian_phenotype_id +chr3 None 0 ENSG00000239093 None None None 1 187141103 187141207 None +chr3 None 0 ENSG00000228952 None None None 1 187166633 187167238 None +chr3 None 0 ENSG00000223401 None None None 1 187461474 187463208 None +chr3 MASP 0 ENSG00000127241 None PRSS5,MASP1,CRARF 16.8141071 -1 186935942 187009810 None +chr3 PRSS5 0 ENSG00000127241 None MASP1,CRARF,MASP 16.8141071 -1 186935942 187009810 None +chr3 MASP1 1 ENSG00000127241 6901 PRSS5,CRARF,MASP 16.8141071 -1 186935942 187009810 None +chr3 CRARF 0 ENSG00000127241 None PRSS5,MASP1,MASP 16.8141071 -1 186935942 187009810 None +chr3 IFRG28 0 ENSG00000136514 None RTP4,Z3CXXC4 94.35008257 1 187086120 187089864 None +chr3 RTP4 1 ENSG00000136514 23992 IFRG28,Z3CXXC4 94.35008257 1 187086120 187089864 None +chr3 Z3CXXC4 0 ENSG00000136514 None IFRG28,RTP4 94.35008257 1 187086120 187089864 None +chr3 SST 1 ENSG00000157005 11329 SMST 78.16112291 -1 187386694 187388187 MP:0002873,MP:0005386,MP:0005376,MP:0005381,MP:0003631,MP:0005378 +chr3 SMST 0 ENSG00000157005 None SST 78.16112291 -1 187386694 187388187 MP:0002873,MP:0005386,MP:0005376,MP:0005381,MP:0003631,MP:0005378 +chr3 Z3CXXC2 0 ENSG00000198471 None RTP2,MGC78665 69.20853975 -1 187416047 187420345 MP:0005389 +chr3 RTP2 1 ENSG00000198471 32486 Z3CXXC2,MGC78665 69.20853975 -1 187416047 187420345 MP:0005389 +chr3 MGC78665 0 ENSG00000198471 None Z3CXXC2,RTP2 69.20853975 -1 187416047 187420345 MP:0005389 +chr3 None 0 ENSG00000228804 None None None 1 187420101 187451637 None +chr3 ZNF51 0 ENSG00000113916 None LAZ3,BCL5,BCL6,ZBTB27,BCL6A 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387 +chr3 LAZ3 0 ENSG00000113916 None BCL5,ZNF51,BCL6,ZBTB27,BCL6A 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387 +chr3 BCL5 0 ENSG00000113916 None LAZ3,ZNF51,BCL6,ZBTB27,BCL6A 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387 +chr3 BCL6A 0 ENSG00000113916 None LAZ3,ZNF51,BCL6,BCL5,ZBTB27 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387 +chr3 BCL6 1 ENSG00000113916 1001 LAZ3,ZNF51,ZBTB27,BCL5,BCL6A 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387 +chr3 ZBTB27 0 ENSG00000113916 None LAZ3,ZNF51,BCL6,BCL5,BCL6A 23.5727766 -1 187439165 187463515 MP:0005369,MP:0005384,MP:0005376,MP:0005388,MP:0005370,MP:0010768,MP:0002873,MP:0005389,MP:0005378,MP:0005397,MP:0005385,MP:0005387