comparison gemini_windower.xml @ 4:9aad9ef0502c draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313

3:8f04952b8882

<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0">
    <description>Conducting analyses on genome "windows"</description>
    <macros>
        <import>gemini_macros.xml</import>
        <token name="@BINARY@">windower</token>
    </macros>

    <outputs>
        <data name="outfile" format="tabular" />
    </outputs>
    <tests>
        <test>
            <param name="infile" value="gemini_windower_input.db" ftype="gemini.sqlite" />
            <param name="w" value="10000" />
            <param name="window_analysis" value="nucl_div" />
            <param name="operation" value="mean" />
            <output name="outfile" file="gemini_windower_result.tabular" />
        </test>
    </tests>
    <help><![CDATA[
**What it does**

4:9aad9ef0502c

<tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
    <description>Conducting analyses on genome "windows"</description>
    <macros>
        <import>gemini_macros.xml</import>
        <token name="@BINARY@">windower</token>
    </macros>

    <outputs>
        <data name="outfile" format="tabular" />
    </outputs>
    <tests>
        <test>
            <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
            <param name="w" value="50000" />
            <param name="s" value="50000000" />
            <param name="window_analysis" value="nucl_div" />
            <param name="operation" value="mean" />
            <output name="outfile" file="gemini_windower_template.tabular" compare="re_match" />
        </test>
    </tests>
    <help><![CDATA[
**What it does**