Mercurial > repos > iuc > get_hrun

diff test-data/out.vcf @ 0:84f70ce0b830 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/get_hrun commit 5810d89666698dbe49ef17c334799fce76823621"
author iuc
date Tue, 02 Mar 2021 21:35:40 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/out.vcf	Tue Mar 02 21:35:40 2021 +0000
@@ -0,0 +1,11 @@
+##fileformat=VCFv4.1
+##medaka_version=1.0.3
+##INFO=<ID=HRUN,Number=1,Type=Integer,Description="Homopolymer length to the right of report indel position">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Medaka genotype.">
+##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Medaka genotype quality score">
+##contig=<ID=MN908947.3>
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMPLE
+MN908947.3	29748	.	TAAAAAAAAAAA	TA	243.965	PASS	HRUN=11;	GT:GQ	1:244
+MN908947.3	29749	.	A	ATTT	243.965	PASS	HRUN=11;	GT:GQ	1:244
+MN908947.3	29765	.	TGGGGAACTCG	A	243.965	PASS	HRUN=4;	GT:GQ	1:244
+MN908947.3	29789	.	TATATGGAAGA	A	243.965	PASS	HRUN=1;	GT:GQ	1:244