Mercurial > repos > iuc > gff_to_prot
changeset 7:661c164268cc draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transit/ commit 0daaffac75df549583b6d834113608c2dbacb1d3
| author | iuc |
|---|---|
| date | Tue, 27 May 2025 20:00:00 +0000 |
| parents | 07d7991bf205 |
| children | |
| files | macros.xml test-data/gff_to_prot-in1.gff3 test-data/gff_to_prot-out1.txt test-data/resampling-sites1.txt |
| diffstat | 4 files changed, 106 insertions(+), 845 deletions(-) [+] |
line wrap: on
line diff
--- a/macros.xml Tue Nov 30 10:59:17 2021 +0000 +++ b/macros.xml Tue May 27 20:00:00 2025 +0000 @@ -17,8 +17,9 @@ <yield /> </requirements> </xml> - <token name="@TOOL_VERSION@">3.0.2</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@TOOL_VERSION@">3.2.3</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@PROFILE@">22.05</token> <xml name="outputs"> <yield /> <data name="sites" from_work_dir="transit_out.txt" format="tabular" label="${tool.name} on ${on_string} Sites" /> @@ -81,8 +82,7 @@ </token> <token name="@STANDARD_OPTIONS@"> -iN $nterm - -tC $cterm + -iC $cterm -n $normalization - -r $handle_replicates </token> </macros>
--- a/test-data/gff_to_prot-in1.gff3 Tue Nov 30 10:59:17 2021 +0000 +++ b/test-data/gff_to_prot-in1.gff3 Tue May 27 20:00:00 2025 +0000 @@ -1,500 +1,5 @@ -##sequence-region NC_007795.1 1 2821361 -##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=93061 -NC_007795.1 RefSeq region 1 2821361 . + . ID=NC_007795.1:1..2821361;Dbxref=taxon:93061;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=NCTC 8325;sub-species=aureus -NC_007795.1 RefSeq gene 517 1878 . + . ID=gene-SAOUHSC_00001;Dbxref=GeneID:3919798;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SAOUHSC_00001 -NC_007795.1 RefSeq CDS 517 1878 . + 0 ID=cds-YP_498609.1;Parent=gene-SAOUHSC_00001;Dbxref=Genbank:YP_498609.1,GeneID:3919798;Name=YP_498609.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;protein_id=YP_498609.1;transl_table=11 -NC_007795.1 RefSeq gene 2156 3289 . + . ID=gene-SAOUHSC_00002;Dbxref=GeneID:3919799;Name=SAOUHSC_00002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00002 -NC_007795.1 RefSeq CDS 2156 3289 . + 0 ID=cds-YP_498610.1;Parent=gene-SAOUHSC_00002;Dbxref=Genbank:YP_498610.1,GeneID:3919799;Name=YP_498610.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=YP_498610.1;transl_table=11 -NC_007795.1 RefSeq gene 3670 3915 . + . ID=gene-SAOUHSC_00003;Dbxref=GeneID:3919176;Name=SAOUHSC_00003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00003 -NC_007795.1 RefSeq CDS 3670 3915 . + 0 ID=cds-YP_498611.1;Parent=gene-SAOUHSC_00003;Dbxref=Genbank:YP_498611.1,GeneID:3919176;Name=YP_498611.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498611.1;transl_table=11 -NC_007795.1 RefSeq gene 3912 5024 . + . ID=gene-SAOUHSC_00004;Dbxref=GeneID:3919177;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SAOUHSC_00004 -NC_007795.1 RefSeq CDS 3912 5024 . + 0 ID=cds-YP_498612.1;Parent=gene-SAOUHSC_00004;Dbxref=Genbank:YP_498612.1,GeneID:3919177;Name=YP_498612.1;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;gbkey=CDS;gene=recF;product=recombination protein F;protein_id=YP_498612.1;transl_table=11 -NC_007795.1 RefSeq gene 5034 6968 . + . ID=gene-SAOUHSC_00005;Dbxref=GeneID:3919178;Name=SAOUHSC_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00005 -NC_007795.1 RefSeq CDS 5034 6968 . + 0 ID=cds-YP_498613.1;Parent=gene-SAOUHSC_00005;Dbxref=Genbank:YP_498613.1,GeneID:3919178;Name=YP_498613.1;Note=DNA gyrase%2C B subunit;gbkey=CDS;product=DNA gyrase subunit B;protein_id=YP_498613.1;transl_table=11 -NC_007795.1 RefSeq gene 7005 9668 . + . ID=gene-SAOUHSC_00006;Dbxref=GeneID:3919179;Name=SAOUHSC_00006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00006 -NC_007795.1 RefSeq CDS 7005 9668 . + 0 ID=cds-YP_498614.1;Parent=gene-SAOUHSC_00006;Dbxref=Genbank:YP_498614.1,GeneID:3919179;Name=YP_498614.1;Note=DNA gyrase%2C A subunit;gbkey=CDS;product=DNA gyrase subunit A;protein_id=YP_498614.1;transl_table=11 -NC_007795.1 RefSeq gene 9755 10456 . - . ID=gene-SAOUHSC_00007;Dbxref=GeneID:3919180;Name=SAOUHSC_00007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00007 -NC_007795.1 RefSeq CDS 9755 10456 . - 0 ID=cds-YP_498615.1;Parent=gene-SAOUHSC_00007;Dbxref=Genbank:YP_498615.1,GeneID:3919180;Name=YP_498615.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498615.1;transl_table=11 -NC_007795.1 RefSeq gene 10893 12407 . + . ID=gene-SAOUHSC_00008;Dbxref=GeneID:3919181;Name=SAOUHSC_00008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00008 -NC_007795.1 RefSeq CDS 10893 12407 . + 0 ID=cds-YP_498616.1;Parent=gene-SAOUHSC_00008;Dbxref=Genbank:YP_498616.1,GeneID:3919181;Name=YP_498616.1;Note=catalyzes the degradation of histidine to urocanate and ammmonia;gbkey=CDS;product=histidine ammonia-lyase;protein_id=YP_498616.1;transl_table=11 -NC_007795.1 RefSeq gene 12786 14072 . + . ID=gene-SAOUHSC_00009;Dbxref=GeneID:3919182;Name=SAOUHSC_00009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00009 -NC_007795.1 RefSeq CDS 12786 14072 . + 0 ID=cds-YP_498617.1;Parent=gene-SAOUHSC_00009;Dbxref=Genbank:YP_498617.1,GeneID:3919182;Name=YP_498617.1;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;product=seryl-tRNA synthetase;protein_id=YP_498617.1;transl_table=11 -NC_007795.1 RefSeq gene 14722 15417 . + . ID=gene-SAOUHSC_00010;Dbxref=GeneID:3919183;Name=SAOUHSC_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00010 -NC_007795.1 RefSeq CDS 14722 15417 . + 0 ID=cds-YP_498618.1;Parent=gene-SAOUHSC_00010;Dbxref=Genbank:YP_498618.1,GeneID:3919183;Name=YP_498618.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498618.1;transl_table=11 -NC_007795.1 RefSeq gene 15414 15743 . + . ID=gene-SAOUHSC_00012;Dbxref=GeneID:3919184;Name=SAOUHSC_00012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00012 -NC_007795.1 RefSeq CDS 15414 15743 . + 0 ID=cds-YP_498619.1;Parent=gene-SAOUHSC_00012;Dbxref=Genbank:YP_498619.1,GeneID:3919184;Name=YP_498619.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498619.1;transl_table=11 -NC_007795.1 RefSeq gene 16106 17074 . + . ID=gene-SAOUHSC_00013;Dbxref=GeneID:3919185;Name=SAOUHSC_00013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00013 -NC_007795.1 RefSeq CDS 16106 17074 . + 0 ID=cds-YP_498620.1;Parent=gene-SAOUHSC_00013;Dbxref=Genbank:YP_498620.1,GeneID:3919185;Name=YP_498620.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498620.1;transl_table=11 -NC_007795.1 RefSeq gene 17365 18303 . + . ID=gene-SAOUHSC_00014;Dbxref=GeneID:3919186;Name=SAOUHSC_00014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00014 -NC_007795.1 RefSeq CDS 17365 18303 . + 0 ID=cds-YP_498621.1;Parent=gene-SAOUHSC_00014;Dbxref=Genbank:YP_498621.1,GeneID:3919186;Name=YP_498621.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498621.1;transl_table=11 -NC_007795.1 RefSeq gene 18318 20285 . + . ID=gene-SAOUHSC_00015;Dbxref=GeneID:3919187;Name=SAOUHSC_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00015 -NC_007795.1 RefSeq CDS 18318 20285 . + 0 ID=cds-YP_498622.1;Parent=gene-SAOUHSC_00015;Dbxref=Genbank:YP_498622.1,GeneID:3919187;Name=YP_498622.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498622.1;transl_table=11 -NC_007795.1 RefSeq gene 20282 20734 . + . ID=gene-SAOUHSC_00017;Dbxref=GeneID:3919188;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SAOUHSC_00017 -NC_007795.1 RefSeq CDS 20282 20734 . + 0 ID=cds-YP_498623.1;Parent=gene-SAOUHSC_00017;Dbxref=Genbank:YP_498623.1,GeneID:3919188;Name=YP_498623.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=YP_498623.1;transl_table=11 -NC_007795.1 RefSeq gene 20766 22166 . + . ID=gene-SAOUHSC_00018;Dbxref=GeneID:3919189;Name=SAOUHSC_00018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00018 -NC_007795.1 RefSeq CDS 20766 22166 . + 0 ID=cds-YP_498624.1;Parent=gene-SAOUHSC_00018;Dbxref=Genbank:YP_498624.1,GeneID:3919189;Name=YP_498624.1;Note=replicative DNA helicase;gbkey=CDS;product=replicative DNA helicase;protein_id=YP_498624.1;transl_table=11 -NC_007795.1 RefSeq gene 22444 23727 . + . ID=gene-SAOUHSC_00019;Dbxref=GeneID:3919190;Name=SAOUHSC_00019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00019 -NC_007795.1 RefSeq CDS 22444 23727 . + 0 ID=cds-YP_498625.1;Parent=gene-SAOUHSC_00019;Dbxref=Genbank:YP_498625.1,GeneID:3919190;Name=YP_498625.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=YP_498625.1;transl_table=11 -NC_007795.1 RefSeq gene 24157 24231 . + . ID=gene-SAOUHSC_T00018;Dbxref=GeneID:3921337;Name=SAOUHSC_T00018;gbkey=Gene;gene_biotype=tRNA;locus_tag=SAOUHSC_T00018 -NC_007795.1 RefSeq tRNA 24157 24231 . + . ID=rna-SAOUHSC_T00018;Parent=gene-SAOUHSC_T00018;Dbxref=GeneID:3921337;Note=tRNA-Glu-1;gbkey=tRNA;product=tRNA-Glu -NC_007795.1 RefSeq exon 24157 24231 . + . ID=exon-SAOUHSC_T00018-1;Parent=rna-SAOUHSC_T00018;Dbxref=GeneID:3921337;Note=tRNA-Glu-1;gbkey=tRNA;product=tRNA-Glu -NC_007795.1 RefSeq gene 24239 24311 . + . ID=gene-SAOUHSC_T00011;Dbxref=GeneID:3921330;Name=SAOUHSC_T00011;gbkey=Gene;gene_biotype=tRNA;locus_tag=SAOUHSC_T00011 -NC_007795.1 RefSeq tRNA 24239 24311 . + . ID=rna-SAOUHSC_T00011;Parent=gene-SAOUHSC_T00011;Dbxref=GeneID:3921330;Note=tRNA-Asp-1;gbkey=tRNA;product=tRNA-Asp -NC_007795.1 RefSeq exon 24239 24311 . + . ID=exon-SAOUHSC_T00011-1;Parent=rna-SAOUHSC_T00011;Dbxref=GeneID:3921330;Note=tRNA-Asp-1;gbkey=tRNA;product=tRNA-Asp -NC_007795.1 RefSeq gene 24931 25632 . + . ID=gene-SAOUHSC_00020;Dbxref=GeneID:3919191;Name=SAOUHSC_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00020 -NC_007795.1 RefSeq CDS 24931 25632 . + 0 ID=cds-YP_498626.1;Parent=gene-SAOUHSC_00020;Dbxref=Genbank:YP_498626.1,GeneID:3919191;Name=YP_498626.1;Note=two-component response regulator%2C putative;gbkey=CDS;product=two-component response regulator;protein_id=YP_498626.1;transl_table=11 -NC_007795.1 RefSeq gene 25645 27471 . + . ID=gene-SAOUHSC_00021;Dbxref=GeneID:3919192;Name=SAOUHSC_00021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00021 -NC_007795.1 RefSeq CDS 25645 27471 . + 0 ID=cds-YP_498627.1;Parent=gene-SAOUHSC_00021;Dbxref=Genbank:YP_498627.1,GeneID:3919192;Name=YP_498627.1;Note=sensory box histidine kinase VicK%2C putative;gbkey=CDS;product=sensory box histidine kinase VicK;protein_id=YP_498627.1;transl_table=11 -NC_007795.1 RefSeq gene 27515 28798 . + . ID=gene-SAOUHSC_00022;Dbxref=GeneID:3919193;Name=SAOUHSC_00022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00022 -NC_007795.1 RefSeq CDS 27515 28798 . + 0 ID=cds-YP_498628.1;Parent=gene-SAOUHSC_00022;Dbxref=Genbank:YP_498628.1,GeneID:3919193;Name=YP_498628.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498628.1;transl_table=11 -NC_007795.1 RefSeq gene 28799 29587 . + . ID=gene-SAOUHSC_00023;Dbxref=GeneID:3919194;Name=SAOUHSC_00023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00023 -NC_007795.1 RefSeq CDS 28799 29587 . + 0 ID=cds-YP_498629.1;Parent=gene-SAOUHSC_00023;Dbxref=Genbank:YP_498629.1,GeneID:3919194;Name=YP_498629.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498629.1;transl_table=11 -NC_007795.1 RefSeq gene 29977 30777 . + . ID=gene-SAOUHSC_00024;Dbxref=GeneID:3919195;Name=SAOUHSC_00024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00024 -NC_007795.1 RefSeq CDS 29977 30777 . + 0 ID=cds-YP_498630.1;Parent=gene-SAOUHSC_00024;Dbxref=Genbank:YP_498630.1,GeneID:3919195;Name=YP_498630.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498630.1;transl_table=11 -NC_007795.1 RefSeq gene 31005 33323 . + . ID=gene-SAOUHSC_00025;Dbxref=GeneID:3919293;Name=SAOUHSC_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00025 -NC_007795.1 RefSeq CDS 31005 33323 . + 0 ID=cds-YP_498631.1;Parent=gene-SAOUHSC_00025;Dbxref=Genbank:YP_498631.1,GeneID:3919293;Name=YP_498631.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498631.1;transl_table=11 -NC_007795.1 RefSeq gene 33555 34034 . - . ID=gene-SAOUHSC_00026;Dbxref=GeneID:3919294;Name=SAOUHSC_00026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00026 -NC_007795.1 RefSeq CDS 33555 34034 . - 0 ID=cds-YP_498632.1;Parent=gene-SAOUHSC_00026;Dbxref=Genbank:YP_498632.1,GeneID:3919294;Name=YP_498632.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498632.1;transl_table=11 -NC_007795.1 RefSeq gene 33691 34170 . + . ID=gene-SAOUHSC_00027;Dbxref=GeneID:3919295;Name=SAOUHSC_00027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00027 -NC_007795.1 RefSeq CDS 33691 34170 . + 0 ID=cds-YP_498633.1;Parent=gene-SAOUHSC_00027;Dbxref=Genbank:YP_498633.1,GeneID:3919295;Name=YP_498633.1;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;gbkey=CDS;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=YP_498633.1;transl_table=11 -NC_007795.1 RefSeq gene 34375 34509 . - . ID=gene-SAOUHSC_00028;Dbxref=GeneID:3919296;Name=SAOUHSC_00028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00028 -NC_007795.1 RefSeq CDS 34375 34509 . - 0 ID=cds-YP_498634.1;Parent=gene-SAOUHSC_00028;Dbxref=Genbank:YP_498634.1,GeneID:3919296;Name=YP_498634.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498634.1;transl_table=11 -NC_007795.1 RefSeq gene 34473 34565 . + . ID=gene-SAOUHSC_00029;Dbxref=GeneID:3919297;Name=SAOUHSC_00029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00029 -NC_007795.1 RefSeq CDS 34473 34565 . + 0 ID=cds-YP_498635.1;Parent=gene-SAOUHSC_00029;Dbxref=Genbank:YP_498635.1,GeneID:3919297;Name=YP_498635.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498635.1;transl_table=11 -NC_007795.1 RefSeq gene 34712 36457 . + . ID=gene-SAOUHSC_00030;Dbxref=GeneID:3919298;Name=SAOUHSC_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00030 -NC_007795.1 RefSeq CDS 34712 36457 . + 0 ID=cds-YP_498636.1;Parent=gene-SAOUHSC_00030;Dbxref=Genbank:YP_498636.1,GeneID:3919298;Name=YP_498636.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498636.1;transl_table=11 -NC_007795.1 RefSeq gene 36551 37003 . - . ID=gene-SAOUHSC_00031;Dbxref=GeneID:3919299;Name=SAOUHSC_00031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00031 -NC_007795.1 RefSeq CDS 36551 37003 . - 0 ID=cds-YP_498637.1;Parent=gene-SAOUHSC_00031;Dbxref=Genbank:YP_498637.1,GeneID:3919299;Name=YP_498637.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498637.1;transl_table=11 -NC_007795.1 RefSeq gene 37019 37120 . - . ID=gene-SAOUHSC_00032;Dbxref=GeneID:3919300;Name=SAOUHSC_00032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00032 -NC_007795.1 RefSeq CDS 37019 37120 . - 0 ID=cds-YP_498638.1;Parent=gene-SAOUHSC_00032;Dbxref=Genbank:YP_498638.1,GeneID:3919300;Name=YP_498638.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498638.1;transl_table=11 -NC_007795.1 RefSeq gene 37218 37973 . - . ID=gene-SAOUHSC_00033;Dbxref=GeneID:3919301;Name=SAOUHSC_00033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00033 -NC_007795.1 RefSeq CDS 37218 37973 . - 0 ID=cds-YP_498639.1;Parent=gene-SAOUHSC_00033;Dbxref=Genbank:YP_498639.1,GeneID:3919301;Name=YP_498639.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498639.1;transl_table=11 -NC_007795.1 RefSeq gene 37973 38233 . - . ID=gene-SAOUHSC_00034;Dbxref=GeneID:3919302;Name=SAOUHSC_00034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00034 -NC_007795.1 RefSeq CDS 37973 38233 . - 0 ID=cds-YP_498640.1;Parent=gene-SAOUHSC_00034;Dbxref=Genbank:YP_498640.1,GeneID:3919302;Name=YP_498640.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498640.1;transl_table=11 -NC_007795.1 RefSeq gene 38370 39437 . + . ID=gene-SAOUHSC_00035;Dbxref=GeneID:3919303;Name=SAOUHSC_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00035 -NC_007795.1 RefSeq CDS 38370 39437 . + 0 ID=cds-YP_498641.1;Parent=gene-SAOUHSC_00035;Dbxref=Genbank:YP_498641.1,GeneID:3919303;Name=YP_498641.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498641.1;transl_table=11 -NC_007795.1 RefSeq gene 39468 40802 . + . ID=gene-SAOUHSC_00036;Dbxref=GeneID:3919304;Name=SAOUHSC_00036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00036 -NC_007795.1 RefSeq CDS 39468 40802 . + 0 ID=cds-YP_498642.1;Parent=gene-SAOUHSC_00036;Dbxref=Genbank:YP_498642.1,GeneID:3919304;Name=YP_498642.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498642.1;transl_table=11 -NC_007795.1 RefSeq gene 40821 42014 . + . ID=gene-SAOUHSC_00037;Dbxref=GeneID:3919305;Name=SAOUHSC_00037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00037 -NC_007795.1 RefSeq CDS 40821 42014 . + 0 ID=cds-YP_498643.1;Parent=gene-SAOUHSC_00037;Dbxref=Genbank:YP_498643.1,GeneID:3919305;Name=YP_498643.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498643.1;transl_table=11 -NC_007795.1 RefSeq gene 42281 42382 . - . ID=gene-SAOUHSC_00038;Dbxref=GeneID:3919306;Name=SAOUHSC_00038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00038 -NC_007795.1 RefSeq CDS 42281 42382 . - 0 ID=cds-YP_498644.1;Parent=gene-SAOUHSC_00038;Dbxref=Genbank:YP_498644.1,GeneID:3919306;Name=YP_498644.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498644.1;transl_table=11 -NC_007795.1 RefSeq gene 42681 43613 . - . ID=gene-SAOUHSC_00039;Dbxref=GeneID:3919307;Name=SAOUHSC_00039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00039 -NC_007795.1 RefSeq CDS 42681 43613 . - 0 ID=cds-YP_498645.1;Parent=gene-SAOUHSC_00039;Dbxref=Genbank:YP_498645.1,GeneID:3919307;Name=YP_498645.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498645.1;transl_table=11 -NC_007795.1 RefSeq gene 43976 44179 . + . ID=gene-SAOUHSC_00040;Dbxref=GeneID:3919308;Name=SAOUHSC_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00040 -NC_007795.1 RefSeq CDS 43976 44179 . + 0 ID=cds-YP_498646.1;Parent=gene-SAOUHSC_00040;Dbxref=Genbank:YP_498646.1,GeneID:3919308;Name=YP_498646.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498646.1;transl_table=11 -NC_007795.1 RefSeq gene 44228 44524 . + . ID=gene-SAOUHSC_00041;Dbxref=GeneID:3919309;Name=SAOUHSC_00041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00041 -NC_007795.1 RefSeq CDS 44228 44524 . + 0 ID=cds-YP_498647.1;Parent=gene-SAOUHSC_00041;Dbxref=Genbank:YP_498647.1,GeneID:3919309;Name=YP_498647.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498647.1;transl_table=11 -NC_007795.1 RefSeq gene 44596 45816 . - . ID=gene-SAOUHSC_00042;Dbxref=GeneID:3919310;Name=SAOUHSC_00042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00042 -NC_007795.1 RefSeq CDS 44596 45816 . - 0 ID=cds-YP_498648.1;Parent=gene-SAOUHSC_00042;Dbxref=Genbank:YP_498648.1,GeneID:3919310;Name=YP_498648.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498648.1;transl_table=11 -NC_007795.1 RefSeq gene 45809 46360 . - . ID=gene-SAOUHSC_00043;Dbxref=GeneID:3919311;Name=SAOUHSC_00043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00043 -NC_007795.1 RefSeq CDS 45809 46360 . - 0 ID=cds-YP_498649.1;Parent=gene-SAOUHSC_00043;Dbxref=Genbank:YP_498649.1,GeneID:3919311;Name=YP_498649.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498649.1;transl_table=11 -NC_007795.1 RefSeq gene 46473 47333 . + . ID=gene-SAOUHSC_00044;Dbxref=GeneID:3919077;Name=SAOUHSC_00044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00044 -NC_007795.1 RefSeq CDS 46473 47333 . + 0 ID=cds-YP_498650.1;Parent=gene-SAOUHSC_00044;Dbxref=Genbank:YP_498650.1,GeneID:3919077;Name=YP_498650.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498650.1;transl_table=11 -NC_007795.1 RefSeq gene 47689 48222 . - . ID=gene-SAOUHSC_00045;Dbxref=GeneID:3919078;Name=SAOUHSC_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00045 -NC_007795.1 RefSeq CDS 47689 48222 . - 0 ID=cds-YP_498651.1;Parent=gene-SAOUHSC_00045;Dbxref=Genbank:YP_498651.1,GeneID:3919078;Name=YP_498651.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498651.1;transl_table=11 -NC_007795.1 RefSeq gene 48313 49056 . + . ID=gene-SAOUHSC_00046;Dbxref=GeneID:3919079;Name=SAOUHSC_00046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00046 -NC_007795.1 RefSeq CDS 48313 49056 . + 0 ID=cds-YP_498652.1;Parent=gene-SAOUHSC_00046;Dbxref=Genbank:YP_498652.1,GeneID:3919079;Name=YP_498652.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498652.1;transl_table=11 -NC_007795.1 RefSeq gene 49490 50092 . + . ID=gene-SAOUHSC_00047;Dbxref=GeneID:3919080;Name=SAOUHSC_00047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00047 -NC_007795.1 RefSeq CDS 49490 50092 . + 0 ID=cds-YP_498653.1;Parent=gene-SAOUHSC_00047;Dbxref=Genbank:YP_498653.1,GeneID:3919080;Name=YP_498653.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498653.1;transl_table=11 -NC_007795.1 RefSeq gene 50359 53511 . + . ID=gene-SAOUHSC_00049;Dbxref=GeneID:3919081;Name=SAOUHSC_00049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00049 -NC_007795.1 RefSeq CDS 50359 53511 . + 0 ID=cds-YP_498654.1;Parent=gene-SAOUHSC_00049;Dbxref=Genbank:YP_498654.1,GeneID:3919081;Name=YP_498654.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498654.1;transl_table=11 -NC_007795.1 RefSeq gene 53568 54050 . + . ID=gene-SAOUHSC_00050;Dbxref=GeneID:3919082;Name=SAOUHSC_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00050 -NC_007795.1 RefSeq CDS 53568 54050 . + 0 ID=cds-YP_498655.1;Parent=gene-SAOUHSC_00050;Dbxref=Genbank:YP_498655.1,GeneID:3919082;Name=YP_498655.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498655.1;transl_table=11 -NC_007795.1 RefSeq gene 54255 55241 . + . ID=gene-SAOUHSC_00051;Dbxref=GeneID:3919083;Name=SAOUHSC_00051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00051 -NC_007795.1 RefSeq CDS 54255 55241 . + 0 ID=cds-YP_498656.1;Parent=gene-SAOUHSC_00051;Dbxref=Genbank:YP_498656.1,GeneID:3919083;Name=YP_498656.1;Note=1-phosphatidylinositol phosphodiesterase precursor%2C putative;gbkey=CDS;product=1-phosphatidylinositol phosphodiesterase;protein_id=YP_498656.1;transl_table=11 -NC_007795.1 RefSeq gene 55462 56232 . + . ID=gene-SAOUHSC_00052;Dbxref=GeneID:3919084;Name=SAOUHSC_00052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00052 -NC_007795.1 RefSeq CDS 55462 56232 . + 0 ID=cds-YP_498657.1;Parent=gene-SAOUHSC_00052;Dbxref=Genbank:YP_498657.1,GeneID:3919084;Name=YP_498657.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498657.1;transl_table=11 -NC_007795.1 RefSeq gene 56284 57054 . + . ID=gene-SAOUHSC_00053;Dbxref=GeneID:3919085;Name=SAOUHSC_00053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00053 -NC_007795.1 RefSeq CDS 56284 57054 . + 0 ID=cds-YP_498658.1;Parent=gene-SAOUHSC_00053;Dbxref=Genbank:YP_498658.1,GeneID:3919085;Name=YP_498658.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498658.1;transl_table=11 -NC_007795.1 RefSeq gene 57118 57888 . + . ID=gene-SAOUHSC_00054;Dbxref=GeneID:3919086;Name=SAOUHSC_00054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00054 -NC_007795.1 RefSeq CDS 57118 57888 . + 0 ID=cds-YP_498659.1;Parent=gene-SAOUHSC_00054;Dbxref=Genbank:YP_498659.1,GeneID:3919086;Name=YP_498659.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498659.1;transl_table=11 -NC_007795.1 RefSeq gene 57955 58722 . + . ID=gene-SAOUHSC_00055;Dbxref=GeneID:3919087;Name=SAOUHSC_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00055 -NC_007795.1 RefSeq CDS 57955 58722 . + 0 ID=cds-YP_498660.1;Parent=gene-SAOUHSC_00055;Dbxref=Genbank:YP_498660.1,GeneID:3919087;Name=YP_498660.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498660.1;transl_table=11 -NC_007795.1 RefSeq gene 58855 61053 . + . ID=gene-SAOUHSC_00056;Dbxref=GeneID:3919088;Name=SAOUHSC_00056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00056 -NC_007795.1 RefSeq CDS 58855 61053 . + 0 ID=cds-YP_498661.1;Parent=gene-SAOUHSC_00056;Dbxref=Genbank:YP_498661.1,GeneID:3919088;Name=YP_498661.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498661.1;transl_table=11 -NC_007795.1 RefSeq gene 61204 62382 . + . ID=gene-SAOUHSC_00057;Dbxref=GeneID:3919089;Name=SAOUHSC_00057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00057 -NC_007795.1 RefSeq CDS 61204 62382 . + 0 ID=cds-YP_498662.1;Parent=gene-SAOUHSC_00057;Dbxref=Genbank:YP_498662.1,GeneID:3919089;Name=YP_498662.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498662.1;transl_table=11 -NC_007795.1 RefSeq gene 62384 63772 . + . ID=gene-SAOUHSC_00058;Dbxref=GeneID:3919090;Name=SAOUHSC_00058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00058 -NC_007795.1 RefSeq CDS 62384 63772 . + 0 ID=cds-YP_498663.1;Parent=gene-SAOUHSC_00058;Dbxref=Genbank:YP_498663.1,GeneID:3919090;Name=YP_498663.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498663.1;transl_table=11 -NC_007795.1 RefSeq gene 64265 65926 . - . ID=gene-SAOUHSC_00060;Dbxref=GeneID:3919091;Name=SAOUHSC_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00060 -NC_007795.1 RefSeq CDS 64265 65926 . - 0 ID=cds-YP_498664.1;Parent=gene-SAOUHSC_00060;Dbxref=Genbank:YP_498664.1,GeneID:3919091;Name=YP_498664.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498664.1;transl_table=11 -NC_007795.1 RefSeq gene 66252 68027 . - . ID=gene-SAOUHSC_00061;Dbxref=GeneID:3919092;Name=SAOUHSC_00061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00061 -NC_007795.1 RefSeq CDS 66252 68027 . - 0 ID=cds-YP_498665.1;Parent=gene-SAOUHSC_00061;Dbxref=Genbank:YP_498665.1,GeneID:3919092;Name=YP_498665.1;Note=in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever;gbkey=CDS;product=myosin-cross-reactive antigen;protein_id=YP_498665.1;transl_table=11 -NC_007795.1 RefSeq gene 68201 69073 . - . ID=gene-SAOUHSC_00062;Dbxref=GeneID:3919093;Name=SAOUHSC_00062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00062 -NC_007795.1 RefSeq CDS 68201 69073 . - 0 ID=cds-YP_498666.1;Parent=gene-SAOUHSC_00062;Dbxref=Genbank:YP_498666.1,GeneID:3919093;Name=YP_498666.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498666.1;transl_table=11 -NC_007795.1 RefSeq gene 69186 70583 . + . ID=gene-SAOUHSC_00064;Dbxref=GeneID:3919094;Name=SAOUHSC_00064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00064 -NC_007795.1 RefSeq CDS 69186 70583 . + 0 ID=cds-YP_498667.1;Parent=gene-SAOUHSC_00064;Dbxref=Genbank:YP_498667.1,GeneID:3919094;Name=YP_498667.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498667.1;transl_table=11 -NC_007795.1 RefSeq gene 70773 71246 . + . ID=gene-SAOUHSC_00065;Dbxref=GeneID:3919095;Name=SAOUHSC_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00065 -NC_007795.1 RefSeq CDS 70773 71246 . + 0 ID=cds-YP_498668.1;Parent=gene-SAOUHSC_00065;Dbxref=Genbank:YP_498668.1,GeneID:3919095;Name=YP_498668.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498668.1;transl_table=11 -NC_007795.1 RefSeq gene 71508 73100 . + . ID=gene-SAOUHSC_00067;Dbxref=GeneID:3919096;Name=SAOUHSC_00067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00067 -NC_007795.1 RefSeq CDS 71508 73100 . + 0 ID=cds-YP_498669.1;Parent=gene-SAOUHSC_00067;Dbxref=Genbank:YP_498669.1,GeneID:3919096;Name=YP_498669.1;Note=L-lactate permease;gbkey=CDS;product=L-lactate permease;protein_id=YP_498669.1;transl_table=11 -NC_007795.1 RefSeq gene 73429 74979 . - . ID=gene-SAOUHSC_00069;Dbxref=GeneID:3919448;Name=SAOUHSC_00069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00069 -NC_007795.1 RefSeq CDS 73429 74979 . - 0 ID=cds-YP_498670.1;Parent=gene-SAOUHSC_00069;Dbxref=Genbank:YP_498670.1,GeneID:3919448;Name=YP_498670.1;Note=protein A;gbkey=CDS;product=protein A;protein_id=YP_498670.1;transl_table=11 -NC_007795.1 RefSeq gene 75400 76152 . - . ID=gene-SAOUHSC_00070;Dbxref=GeneID:3919449;Name=SAOUHSC_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00070 -NC_007795.1 RefSeq CDS 75400 76152 . - 0 ID=cds-YP_498671.1;Parent=gene-SAOUHSC_00070;Dbxref=Genbank:YP_498671.1,GeneID:3919449;Name=YP_498671.1;Note=staphylococcal accessory regulator-like protein;gbkey=CDS;product=accessory regulator-like protein;protein_id=YP_498671.1;transl_table=11 -NC_007795.1 RefSeq gene 76521 77435 . - . ID=gene-SAOUHSC_00071;Dbxref=GeneID:3919450;Name=SAOUHSC_00071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00071 -NC_007795.1 RefSeq CDS 76521 77435 . - 0 ID=cds-YP_498672.1;Parent=gene-SAOUHSC_00071;Dbxref=Genbank:YP_498672.1,GeneID:3919450;Name=YP_498672.1;Note=lipoprotein%2C SirC%2C putative;gbkey=CDS;product=lipoprotein SirC;protein_id=YP_498672.1;transl_table=11 -NC_007795.1 RefSeq gene 77516 78511 . - . ID=gene-SAOUHSC_00072;Dbxref=GeneID:3919451;Name=SAOUHSC_00072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00072 -NC_007795.1 RefSeq CDS 77516 78511 . - 0 ID=cds-YP_498673.1;Parent=gene-SAOUHSC_00072;Dbxref=Genbank:YP_498673.1,GeneID:3919451;Name=YP_498673.1;Note=lipoprotein%2C SirB%2C putative;gbkey=CDS;product=lipoprotein SirB;protein_id=YP_498673.1;transl_table=11 -NC_007795.1 RefSeq gene 78527 79519 . - . ID=gene-SAOUHSC_00074;Dbxref=GeneID:3919452;Name=SAOUHSC_00074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00074 -NC_007795.1 RefSeq CDS 78527 79519 . - 0 ID=cds-YP_498674.1;Parent=gene-SAOUHSC_00074;Dbxref=Genbank:YP_498674.1,GeneID:3919452;Name=YP_498674.1;Note=periplasmic binding protein%2C putative;gbkey=CDS;product=periplasmic binding protein;protein_id=YP_498674.1;transl_table=11 -NC_007795.1 RefSeq gene 79885 80730 . + . ID=gene-SAOUHSC_00075;Dbxref=GeneID:3919453;Name=SAOUHSC_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00075 -NC_007795.1 RefSeq CDS 79885 80730 . + 0 ID=cds-YP_498675.1;Parent=gene-SAOUHSC_00075;Dbxref=Genbank:YP_498675.1,GeneID:3919453;Name=YP_498675.1;Note=conserved hypothetical protein;gbkey=CDS;product=2%2C3-diaminopropionate biosynthesis protein SbnA;protein_id=YP_498675.1;transl_table=11 -NC_007795.1 RefSeq gene 80727 81737 . + . ID=gene-SAOUHSC_00076;Dbxref=GeneID:3919454;Name=SAOUHSC_00076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00076 -NC_007795.1 RefSeq CDS 80727 81737 . + 0 ID=cds-YP_498676.1;Parent=gene-SAOUHSC_00076;Dbxref=Genbank:YP_498676.1,GeneID:3919454;Name=YP_498676.1;Note=ornithine cyclodeaminase%2C putative;gbkey=CDS;product=2%2C3-diaminopropionate biosynthesis protein SbnB;protein_id=YP_498676.1;transl_table=11 -NC_007795.1 RefSeq gene 81758 83512 . + . ID=gene-SAOUHSC_00077;Dbxref=GeneID:3919455;Name=SAOUHSC_00077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00077 -NC_007795.1 RefSeq CDS 81758 83512 . + 0 ID=cds-YP_498677.1;Parent=gene-SAOUHSC_00077;Dbxref=Genbank:YP_498677.1,GeneID:3919455;Name=YP_498677.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498677.1;transl_table=11 -NC_007795.1 RefSeq gene 83505 84761 . + . ID=gene-SAOUHSC_00078;Dbxref=GeneID:3919456;Name=SAOUHSC_00078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00078 -NC_007795.1 RefSeq CDS 83505 84761 . + 0 ID=cds-YP_498678.1;Parent=gene-SAOUHSC_00078;Dbxref=Genbank:YP_498678.1,GeneID:3919456;Name=YP_498678.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498678.1;transl_table=11 -NC_007795.1 RefSeq gene 84751 86487 . + . ID=gene-SAOUHSC_00079;Dbxref=GeneID:3919457;Name=SAOUHSC_00079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00079 -NC_007795.1 RefSeq CDS 84751 86487 . + 0 ID=cds-YP_498679.1;Parent=gene-SAOUHSC_00079;Dbxref=Genbank:YP_498679.1,GeneID:3919457;Name=YP_498679.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498679.1;transl_table=11 -NC_007795.1 RefSeq gene 86396 88246 . + . ID=gene-SAOUHSC_00080;Dbxref=GeneID:3919458;Name=SAOUHSC_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00080 -NC_007795.1 RefSeq CDS 86396 88246 . + 0 ID=cds-YP_498680.1;Parent=gene-SAOUHSC_00080;Dbxref=Genbank:YP_498680.1,GeneID:3919458;Name=YP_498680.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498680.1;transl_table=11 -NC_007795.1 RefSeq gene 88221 88997 . + . ID=gene-SAOUHSC_00081;Dbxref=GeneID:3919459;Name=SAOUHSC_00081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00081 -NC_007795.1 RefSeq CDS 88221 88997 . + 0 ID=cds-YP_498681.1;Parent=gene-SAOUHSC_00081;Dbxref=Genbank:YP_498681.1,GeneID:3919459;Name=YP_498681.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498681.1;transl_table=11 -NC_007795.1 RefSeq gene 88997 90199 . + . ID=gene-SAOUHSC_00082;Dbxref=GeneID:3919460;Name=SAOUHSC_00082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00082 -NC_007795.1 RefSeq CDS 88997 90199 . + 0 ID=cds-YP_498682.1;Parent=gene-SAOUHSC_00082;Dbxref=Genbank:YP_498682.1,GeneID:3919460;Name=YP_498682.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498682.1;transl_table=11 -NC_007795.1 RefSeq gene 90203 90967 . + . ID=gene-SAOUHSC_00083;Dbxref=GeneID:3919461;Name=SAOUHSC_00083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00083 -NC_007795.1 RefSeq CDS 90203 90967 . + 0 ID=cds-YP_498683.1;Parent=gene-SAOUHSC_00083;Dbxref=Genbank:YP_498683.1,GeneID:3919461;Name=YP_498683.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498683.1;transl_table=11 -NC_007795.1 RefSeq gene 91163 91570 . + . ID=gene-SAOUHSC_00084;Dbxref=GeneID:3919462;Name=SAOUHSC_00084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00084 -NC_007795.1 RefSeq CDS 91163 91570 . + 0 ID=cds-YP_498685.1;Parent=gene-SAOUHSC_00084;Dbxref=Genbank:YP_498685.1,GeneID:3919462;Name=YP_498685.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498685.1;transl_table=11 -NC_007795.1 RefSeq gene 91620 92246 . + . ID=gene-SAOUHSC_00085;Dbxref=GeneID:3919463;Name=SAOUHSC_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00085 -NC_007795.1 RefSeq CDS 91620 92246 . + 0 ID=cds-YP_498686.1;Parent=gene-SAOUHSC_00085;Dbxref=Genbank:YP_498686.1,GeneID:3919463;Name=YP_498686.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498686.1;transl_table=11 -NC_007795.1 RefSeq gene 92458 93234 . + . ID=gene-SAOUHSC_00086;Dbxref=GeneID:3919464;Name=SAOUHSC_00086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00086 -NC_007795.1 RefSeq CDS 92458 93234 . + 0 ID=cds-YP_498687.1;Parent=gene-SAOUHSC_00086;Dbxref=Genbank:YP_498687.1,GeneID:3919464;Name=YP_498687.1;Note=3-ketoacyl-acyl carrier protein reductase%2C putative;gbkey=CDS;product=acetoin reductase;protein_id=YP_498687.1;transl_table=11 -NC_007795.1 RefSeq gene 93378 93500 . + . ID=gene-SAOUHSC_00087;Dbxref=GeneID:3919465;Name=SAOUHSC_00087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00087 -NC_007795.1 RefSeq CDS 93378 93500 . + 0 ID=cds-YP_498688.1;Parent=gene-SAOUHSC_00087;Dbxref=Genbank:YP_498688.1,GeneID:3919465;Name=YP_498688.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498688.1;transl_table=11 -NC_007795.1 RefSeq gene 93570 94550 . + . ID=gene-SAOUHSC_00088;Dbxref=GeneID:3919466;Name=SAOUHSC_00088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00088 -NC_007795.1 RefSeq CDS 93570 94550 . + 0 ID=cds-YP_498689.1;Parent=gene-SAOUHSC_00088;Dbxref=Genbank:YP_498689.1,GeneID:3919466;Name=YP_498689.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498689.1;transl_table=11 -NC_007795.1 RefSeq gene 94513 95205 . + . ID=gene-SAOUHSC_00089;Dbxref=GeneID:3919800;Name=SAOUHSC_00089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00089 -NC_007795.1 RefSeq CDS 94513 95205 . + 0 ID=cds-YP_498690.1;Parent=gene-SAOUHSC_00089;Dbxref=Genbank:YP_498690.1,GeneID:3919800;Name=YP_498690.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498690.1;transl_table=11 -NC_007795.1 RefSeq gene 95415 96581 . + . ID=gene-SAOUHSC_00090;Dbxref=GeneID:3919801;Name=SAOUHSC_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00090 -NC_007795.1 RefSeq CDS 95415 96581 . + 0 ID=cds-YP_498691.1;Parent=gene-SAOUHSC_00090;Dbxref=Genbank:YP_498691.1,GeneID:3919801;Name=YP_498691.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498691.1;transl_table=11 -NC_007795.1 RefSeq gene 96562 97800 . + . ID=gene-SAOUHSC_00091;Dbxref=GeneID:3919802;Name=SAOUHSC_00091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00091 -NC_007795.1 RefSeq CDS 96562 97800 . + 0 ID=cds-YP_498692.1;Parent=gene-SAOUHSC_00091;Dbxref=Genbank:YP_498692.1,GeneID:3919802;Name=YP_498692.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498692.1;transl_table=11 -NC_007795.1 RefSeq gene 97790 99220 . + . ID=gene-SAOUHSC_00092;Dbxref=GeneID:3919803;Name=SAOUHSC_00092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00092 -NC_007795.1 RefSeq CDS 97790 99220 . + 0 ID=cds-YP_498693.1;Parent=gene-SAOUHSC_00092;Dbxref=Genbank:YP_498693.1,GeneID:3919803;Name=YP_498693.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498693.1;transl_table=11 -NC_007795.1 RefSeq gene 99488 100087 . + . ID=gene-SAOUHSC_00093;Dbxref=GeneID:3919804;Name=SAOUHSC_00093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00093 -NC_007795.1 RefSeq CDS 99488 100087 . + 0 ID=cds-YP_498694.1;Parent=gene-SAOUHSC_00093;Dbxref=Genbank:YP_498694.1,GeneID:3919804;Name=YP_498694.1;Note=superoxide dismutase%2C putative;gbkey=CDS;product=superoxide dismutase;protein_id=YP_498694.1;transl_table=11 -NC_007795.1 RefSeq gene 100455 101054 . + . ID=gene-SAOUHSC_00094;Dbxref=GeneID:3919805;Name=SAOUHSC_00094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00094 -NC_007795.1 RefSeq CDS 100455 101054 . + 0 ID=cds-YP_498695.1;Parent=gene-SAOUHSC_00094;Dbxref=Genbank:YP_498695.1,GeneID:3919805;Name=YP_498695.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498695.1;transl_table=11 -NC_007795.1 RefSeq gene 101370 102125 . - . ID=gene-SAOUHSC_00096;Dbxref=GeneID:3919806;Name=SAOUHSC_00096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00096 -NC_007795.1 RefSeq CDS 101370 102125 . - 0 ID=cds-YP_498696.1;Parent=gene-SAOUHSC_00096;Dbxref=Genbank:YP_498696.1,GeneID:3919806;Name=YP_498696.1;Note=transcriptional regulator%2C GntR family%2C putative;gbkey=CDS;product=GntR family transcriptional regulator;protein_id=YP_498696.1;transl_table=11 -NC_007795.1 RefSeq gene 102361 103068 . + . ID=gene-SAOUHSC_00097;Dbxref=GeneID:3919807;Name=SAOUHSC_00097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00097 -NC_007795.1 RefSeq CDS 102361 103068 . + 0 ID=cds-YP_498698.1;Parent=gene-SAOUHSC_00097;Dbxref=Genbank:YP_498698.1,GeneID:3919807;Name=YP_498698.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=YP_498698.1;transl_table=11 -NC_007795.1 RefSeq gene 103075 104427 . + . ID=gene-SAOUHSC_00099;Dbxref=GeneID:3919808;Name=SAOUHSC_00099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00099 -NC_007795.1 RefSeq CDS 103075 104427 . + 0 ID=cds-YP_498699.1;Parent=gene-SAOUHSC_00099;Dbxref=Genbank:YP_498699.1,GeneID:3919808;Name=YP_498699.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498699.1;transl_table=11 -NC_007795.1 RefSeq gene 104508 105170 . + . ID=gene-SAOUHSC_00100;Dbxref=GeneID:3919809;Name=SAOUHSC_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00100 -NC_007795.1 RefSeq CDS 104508 105170 . + 0 ID=cds-YP_498700.1;Parent=gene-SAOUHSC_00100;Dbxref=Genbank:YP_498700.1,GeneID:3919809;Name=YP_498700.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;product=2-deoxyribose-5-phosphate aldolase;protein_id=YP_498700.1;transl_table=11 -NC_007795.1 RefSeq gene 105198 106376 . + . ID=gene-SAOUHSC_00101;Dbxref=GeneID:3919810;Name=SAOUHSC_00101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00101 -NC_007795.1 RefSeq CDS 105198 106376 . + 0 ID=cds-YP_498701.1;Parent=gene-SAOUHSC_00101;Dbxref=Genbank:YP_498701.1,GeneID:3919810;Name=YP_498701.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;product=phosphopentomutase;protein_id=YP_498701.1;transl_table=11 -NC_007795.1 RefSeq gene 106507 107322 . - . ID=gene-SAOUHSC_00102;Dbxref=GeneID:3919811;Name=SAOUHSC_00102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00102 -NC_007795.1 RefSeq CDS 106507 107322 . - 0 ID=cds-YP_498702.1;Parent=gene-SAOUHSC_00102;Dbxref=Genbank:YP_498702.1,GeneID:3919811;Name=YP_498702.1;Note=phosphonates ABC transporter%2C permease protein CC0363%2C putative;gbkey=CDS;product=phosphonates ABC transporter permease;protein_id=YP_498702.1;transl_table=11 -NC_007795.1 RefSeq gene 107319 108119 . - . ID=gene-SAOUHSC_00103;Dbxref=GeneID:3919812;Name=SAOUHSC_00103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00103 -NC_007795.1 RefSeq CDS 107319 108119 . - 0 ID=cds-YP_498703.1;Parent=gene-SAOUHSC_00103;Dbxref=Genbank:YP_498703.1,GeneID:3919812;Name=YP_498703.1;Note=phosphonates ABC transporter%2C permease protein CC0363%2C putative;gbkey=CDS;product=phosphonates ABC transporter permease;protein_id=YP_498703.1;transl_table=11 -NC_007795.1 RefSeq gene 108121 108894 . - . ID=gene-SAOUHSC_00104;Dbxref=GeneID:3919813;Name=SAOUHSC_00104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00104 -NC_007795.1 RefSeq CDS 108121 108894 . - 0 ID=cds-YP_498704.1;Parent=gene-SAOUHSC_00104;Dbxref=Genbank:YP_498704.1,GeneID:3919813;Name=YP_498704.1;Note=amino acid ABC transporter%2C ATP-binding protein%2C putative;gbkey=CDS;product=amino acid ABC transporter ATP-binding protein;protein_id=YP_498704.1;transl_table=11 -NC_007795.1 RefSeq gene 109108 110064 . - . ID=gene-SAOUHSC_00105;Dbxref=GeneID:3919814;Name=SAOUHSC_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00105 -NC_007795.1 RefSeq CDS 109108 110064 . - 0 ID=cds-YP_498705.1;Parent=gene-SAOUHSC_00105;Dbxref=Genbank:YP_498705.1,GeneID:3919814;Name=YP_498705.1;Note=phosphonate ABC transporter%2C substrate-binding protein%2C putative;gbkey=CDS;product=phosphonate ABC transporter substrate-binding protein;protein_id=YP_498705.1;transl_table=11 -NC_007795.1 RefSeq gene 110293 111837 . + . ID=gene-SAOUHSC_00106;Dbxref=GeneID:3919815;Name=SAOUHSC_00106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00106 -NC_007795.1 RefSeq CDS 110293 111837 . + 0 ID=cds-YP_498706.1;Parent=gene-SAOUHSC_00106;Dbxref=Genbank:YP_498706.1,GeneID:3919815;Name=YP_498706.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498706.1;transl_table=11 -NC_007795.1 RefSeq gene 111888 113423 . + . ID=gene-SAOUHSC_00107;Dbxref=GeneID:3919816;Name=SAOUHSC_00107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00107 -NC_007795.1 RefSeq CDS 111888 113423 . + 0 ID=cds-YP_498707.1;Parent=gene-SAOUHSC_00107;Dbxref=Genbank:YP_498707.1,GeneID:3919816;Name=YP_498707.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498707.1;transl_table=11 -NC_007795.1 RefSeq gene 113507 113710 . + . ID=gene-SAOUHSC_00108;Dbxref=GeneID:3919817;Name=SAOUHSC_00108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00108 -NC_007795.1 RefSeq CDS 113507 113710 . + 0 ID=cds-YP_498708.1;Parent=gene-SAOUHSC_00108;Dbxref=Genbank:YP_498708.1,GeneID:3919817;Name=YP_498708.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498708.1;transl_table=11 -NC_007795.1 RefSeq gene 114083 114568 . + . ID=gene-SAOUHSC_00109;Dbxref=GeneID:3919818;Name=SAOUHSC_00109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00109 -NC_007795.1 RefSeq CDS 114083 114568 . + 0 ID=cds-YP_498709.1;Parent=gene-SAOUHSC_00109;Dbxref=Genbank:YP_498709.1,GeneID:3919818;Name=YP_498709.1;Note=replication initiation protein%2C putative;gbkey=CDS;product=replication initiation protein;protein_id=YP_498709.1;transl_table=11 -NC_007795.1 RefSeq gene 114927 115214 . + . ID=gene-SAOUHSC_00111;Dbxref=GeneID:3919820;Name=SAOUHSC_00111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00111 -NC_007795.1 RefSeq CDS 114927 115214 . + 0 ID=cds-YP_498711.1;Parent=gene-SAOUHSC_00111;Dbxref=Genbank:YP_498711.1,GeneID:3919820;Name=YP_498711.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498711.1;transl_table=11 -NC_007795.1 RefSeq pseudogene 115796 116088 . + . ID=gene-SAOUHSC_00112;Dbxref=GeneID:3919821;Name=SAOUHSC_00112;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SAOUHSC_00112;pseudo=true;pseudogene=unknown -NC_007795.1 RefSeq gene 116538 119147 . + . ID=gene-SAOUHSC_00113;Dbxref=GeneID:3919822;Name=SAOUHSC_00113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00113 -NC_007795.1 RefSeq CDS 116538 119147 . + 0 ID=cds-YP_498713.1;Parent=gene-SAOUHSC_00113;Dbxref=Genbank:YP_498713.1,GeneID:3919822;Name=YP_498713.1;Note=alcohol dehydrogenase%2C iron-containing%2C putative;gbkey=CDS;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=YP_498713.1;transl_table=11 -NC_007795.1 RefSeq gene 119492 120160 . + . ID=gene-SAOUHSC_00114;Dbxref=GeneID:3919823;Name=SAOUHSC_00114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00114 -NC_007795.1 RefSeq CDS 119492 120160 . + 0 ID=cds-YP_498714.1;Parent=gene-SAOUHSC_00114;Dbxref=Genbank:YP_498714.1,GeneID:3919823;Name=YP_498714.1;Note=capsular polysaccharide biosynthesis protein%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein;protein_id=YP_498714.1;transl_table=11 -NC_007795.1 RefSeq gene 120176 120862 . + . ID=gene-SAOUHSC_00115;Dbxref=GeneID:3919824;Name=SAOUHSC_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00115 -NC_007795.1 RefSeq CDS 120176 120862 . + 0 ID=cds-YP_498715.1;Parent=gene-SAOUHSC_00115;Dbxref=Genbank:YP_498715.1,GeneID:3919824;Name=YP_498715.1;Note=capsular polysaccharide synthesis enzyme Cap5B;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5B;protein_id=YP_498715.1;transl_table=11 -NC_007795.1 RefSeq gene 120865 121629 . + . ID=gene-SAOUHSC_00116;Dbxref=GeneID:3919825;Name=SAOUHSC_00116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00116 -NC_007795.1 RefSeq CDS 120865 121629 . + 0 ID=cds-YP_498716.1;Parent=gene-SAOUHSC_00116;Dbxref=Genbank:YP_498716.1,GeneID:3919825;Name=YP_498716.1;Note=capsular polysaccharide synthesis enzyme Cap8C;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap8C;protein_id=YP_498716.1;transl_table=11 -NC_007795.1 RefSeq gene 121649 123472 . + . ID=gene-SAOUHSC_00117;Dbxref=GeneID:3919826;Name=SAOUHSC_00117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00117 -NC_007795.1 RefSeq CDS 121649 123472 . + 0 ID=cds-YP_498717.1;Parent=gene-SAOUHSC_00117;Dbxref=Genbank:YP_498717.1,GeneID:3919826;Name=YP_498717.1;Note=capsular polysaccharide biosynthesis protein Cap5D%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5D;protein_id=YP_498717.1;transl_table=11 -NC_007795.1 RefSeq gene 123462 124490 . + . ID=gene-SAOUHSC_00118;Dbxref=GeneID:3919827;Name=SAOUHSC_00118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00118 -NC_007795.1 RefSeq CDS 123462 124490 . + 0 ID=cds-YP_498718.1;Parent=gene-SAOUHSC_00118;Dbxref=Genbank:YP_498718.1,GeneID:3919827;Name=YP_498718.1;Note=capsular polysaccharide biosynthesis protein Cap5E%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5E;protein_id=YP_498718.1;transl_table=11 -NC_007795.1 RefSeq gene 124503 125612 . + . ID=gene-SAOUHSC_00119;Dbxref=GeneID:3919828;Name=SAOUHSC_00119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00119 -NC_007795.1 RefSeq CDS 124503 125612 . + 0 ID=cds-YP_498719.1;Parent=gene-SAOUHSC_00119;Dbxref=Genbank:YP_498719.1,GeneID:3919828;Name=YP_498719.1;Note=capsular polysaccharide synthesis enzyme Cap8F;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap8F;protein_id=YP_498719.1;transl_table=11 -NC_007795.1 RefSeq gene 125616 126740 . + . ID=gene-SAOUHSC_00120;Dbxref=GeneID:3919829;Name=SAOUHSC_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00120 -NC_007795.1 RefSeq CDS 125616 126740 . + 0 ID=cds-YP_498720.1;Parent=gene-SAOUHSC_00120;Dbxref=Genbank:YP_498720.1,GeneID:3919829;Name=YP_498720.1;Note=UDP-N-acetylglucosamine 2-epimerase;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=YP_498720.1;transl_table=11 -NC_007795.1 RefSeq gene 126743 127369 . + . ID=gene-SAOUHSC_00121;Dbxref=GeneID:3919830;Name=SAOUHSC_00121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00121 -NC_007795.1 RefSeq CDS 126743 127369 . + 0 ID=cds-YP_498721.1;Parent=gene-SAOUHSC_00121;Dbxref=Genbank:YP_498721.1,GeneID:3919830;Name=YP_498721.1;Note=capsular polysaccharide synthesis enzyme O-acetyl transferase Cap5H%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein O-acetyl transferase Cap5H;protein_id=YP_498721.1;transl_table=11 -NC_007795.1 RefSeq gene 127374 128483 . + . ID=gene-SAOUHSC_00122;Dbxref=GeneID:3919831;Name=SAOUHSC_00122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00122 -NC_007795.1 RefSeq CDS 127374 128483 . + 0 ID=cds-YP_498722.1;Parent=gene-SAOUHSC_00122;Dbxref=Genbank:YP_498722.1,GeneID:3919831;Name=YP_498722.1;Note=capsular polysaccharide biosynthesis protein Cap5I%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5I;protein_id=YP_498722.1;transl_table=11 -NC_007795.1 RefSeq gene 128497 129663 . + . ID=gene-SAOUHSC_00123;Dbxref=GeneID:3919832;Name=SAOUHSC_00123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00123 -NC_007795.1 RefSeq CDS 128497 129663 . + 0 ID=cds-YP_498723.1;Parent=gene-SAOUHSC_00123;Dbxref=Genbank:YP_498723.1,GeneID:3919832;Name=YP_498723.1;Note=capsular polysaccharide biosynthesis protein Cap5J%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5J;protein_id=YP_498723.1;transl_table=11 -NC_007795.1 RefSeq gene 129656 130861 . + . ID=gene-SAOUHSC_00124;Dbxref=GeneID:3919833;Name=SAOUHSC_00124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00124 -NC_007795.1 RefSeq CDS 129656 130861 . + 0 ID=cds-YP_498724.1;Parent=gene-SAOUHSC_00124;Dbxref=Genbank:YP_498724.1,GeneID:3919833;Name=YP_498724.1;Note=capsular polysaccharide biosynthesis protein Cap5K%2C putative;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap5K;protein_id=YP_498724.1;transl_table=11 -NC_007795.1 RefSeq gene 130862 132067 . + . ID=gene-SAOUHSC_00125;Dbxref=GeneID:3919834;Name=SAOUHSC_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00125 -NC_007795.1 RefSeq CDS 130862 132067 . + 0 ID=cds-YP_498725.1;Parent=gene-SAOUHSC_00125;Dbxref=Genbank:YP_498725.1,GeneID:3919834;Name=YP_498725.1;Note=cap5L protein/glycosyltransferase%2C putative;gbkey=CDS;product=cap5L protein/glycosyltransferase;protein_id=YP_498725.1;transl_table=11 -NC_007795.1 RefSeq gene 132078 132635 . + . ID=gene-SAOUHSC_00126;Dbxref=GeneID:3919835;Name=SAOUHSC_00126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00126 -NC_007795.1 RefSeq CDS 132078 132635 . + 0 ID=cds-YP_498726.1;Parent=gene-SAOUHSC_00126;Dbxref=Genbank:YP_498726.1,GeneID:3919835;Name=YP_498726.1;Note=capsular polysaccharide biosynthesis protein Cap8M;gbkey=CDS;product=capsular polysaccharide biosynthesis protein Cap8M;protein_id=YP_498726.1;transl_table=11 -NC_007795.1 RefSeq gene 132635 133522 . + . ID=gene-SAOUHSC_00127;Dbxref=GeneID:3919836;Name=SAOUHSC_00127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00127 -NC_007795.1 RefSeq CDS 132635 133522 . + 0 ID=cds-YP_498727.1;Parent=gene-SAOUHSC_00127;Dbxref=Genbank:YP_498727.1,GeneID:3919836;Name=YP_498727.1;Note=cap5N protein/UDP-glucose 4-epimerase%2C putative;gbkey=CDS;product=cap5N protein/UDP-glucose 4-epimerase;protein_id=YP_498727.1;transl_table=11 -NC_007795.1 RefSeq gene 133576 134838 . + . ID=gene-SAOUHSC_00128;Dbxref=GeneID:3919837;Name=SAOUHSC_00128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00128 -NC_007795.1 RefSeq CDS 133576 134838 . + 0 ID=cds-YP_498728.1;Parent=gene-SAOUHSC_00128;Dbxref=Genbank:YP_498728.1,GeneID:3919837;Name=YP_498728.1;Note=cap5O protein/UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase;gbkey=CDS;product=cap5O protein/UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase;protein_id=YP_498728.1;transl_table=11 -NC_007795.1 RefSeq gene 134915 136060 . + . ID=gene-SAOUHSC_00129;Dbxref=GeneID:3919838;Name=SAOUHSC_00129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00129 -NC_007795.1 RefSeq CDS 134915 136060 . + 0 ID=cds-YP_498729.1;Parent=gene-SAOUHSC_00129;Dbxref=Genbank:YP_498729.1,GeneID:3919838;Name=YP_498729.1;Note=UDP-N-acetylglucosamine 2-epimerase;gbkey=CDS;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=YP_498729.1;transl_table=11 -NC_007795.1 RefSeq gene 136125 136451 . - . ID=gene-SAOUHSC_00130;Dbxref=GeneID:3919839;Name=SAOUHSC_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00130 -NC_007795.1 RefSeq CDS 136125 136451 . - 0 ID=cds-YP_498730.1;Parent=gene-SAOUHSC_00130;Dbxref=Genbank:YP_498730.1,GeneID:3919839;Name=YP_498730.1;Note=iron regulated%3B catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source;gbkey=CDS;product=heme-degrading monooxygenase IsdI;protein_id=YP_498730.1;transl_table=11 -NC_007795.1 RefSeq gene 136458 136841 . - . ID=gene-SAOUHSC_00131;Dbxref=GeneID:3919840;Name=SAOUHSC_00131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00131 -NC_007795.1 RefSeq CDS 136458 136841 . - 0 ID=cds-YP_498731.1;Parent=gene-SAOUHSC_00131;Dbxref=Genbank:YP_498731.1,GeneID:3919840;Name=YP_498731.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498731.1;transl_table=11 -NC_007795.1 RefSeq gene 137268 138755 . + . ID=gene-SAOUHSC_00132;Dbxref=GeneID:3919841;Name=SAOUHSC_00132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00132 -NC_007795.1 RefSeq CDS 137268 138755 . + 0 ID=cds-YP_498732.1;Parent=gene-SAOUHSC_00132;Dbxref=Genbank:YP_498732.1,GeneID:3919841;Name=YP_498732.1;Note=aldehyde dehydrogenase%2C putative;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_498732.1;transl_table=11 -NC_007795.1 RefSeq gene 139401 140360 . + . ID=gene-SAOUHSC_00133;Dbxref=GeneID:3919842;Name=SAOUHSC_00133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00133 -NC_007795.1 RefSeq CDS 139401 140360 . + 0 ID=cds-YP_498733.1;Parent=gene-SAOUHSC_00133;Dbxref=Genbank:YP_498733.1,GeneID:3919842;Name=YP_498733.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498733.1;transl_table=11 -NC_007795.1 RefSeq gene 140422 140625 . - . ID=gene-SAOUHSC_00134;Dbxref=GeneID:3919843;Name=SAOUHSC_00134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00134 -NC_007795.1 RefSeq CDS 140422 140625 . - 0 ID=cds-YP_498734.1;Parent=gene-SAOUHSC_00134;Dbxref=Genbank:YP_498734.1,GeneID:3919843;Name=YP_498734.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498734.1;transl_table=11 -NC_007795.1 RefSeq gene 140804 141316 . + . ID=gene-SAOUHSC_00135;Dbxref=GeneID:3919844;Name=SAOUHSC_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00135 -NC_007795.1 RefSeq CDS 140804 141316 . + 0 ID=cds-YP_498735.1;Parent=gene-SAOUHSC_00135;Dbxref=Genbank:YP_498735.1,GeneID:3919844;Name=YP_498735.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498735.1;transl_table=11 -NC_007795.1 RefSeq gene 141658 142398 . + . ID=gene-SAOUHSC_00136;Dbxref=GeneID:3919845;Name=SAOUHSC_00136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00136 -NC_007795.1 RefSeq CDS 141658 142398 . + 0 ID=cds-YP_498736.1;Parent=gene-SAOUHSC_00136;Dbxref=Genbank:YP_498736.1,GeneID:3919845;Name=YP_498736.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498736.1;transl_table=11 -NC_007795.1 RefSeq gene 142412 143386 . + . ID=gene-SAOUHSC_00137;Dbxref=GeneID:3919846;Name=SAOUHSC_00137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00137 -NC_007795.1 RefSeq CDS 142412 143386 . + 0 ID=cds-YP_498737.1;Parent=gene-SAOUHSC_00137;Dbxref=Genbank:YP_498737.1,GeneID:3919846;Name=YP_498737.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498737.1;transl_table=11 -NC_007795.1 RefSeq gene 143383 144144 . + . ID=gene-SAOUHSC_00138;Dbxref=GeneID:3919847;Name=SAOUHSC_00138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00138 -NC_007795.1 RefSeq CDS 143383 144144 . + 0 ID=cds-YP_498738.1;Parent=gene-SAOUHSC_00138;Dbxref=Genbank:YP_498738.1,GeneID:3919847;Name=YP_498738.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498738.1;transl_table=11 -NC_007795.1 RefSeq gene 144157 145188 . + . ID=gene-SAOUHSC_00139;Dbxref=GeneID:3919848;Name=SAOUHSC_00139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00139 -NC_007795.1 RefSeq CDS 144157 145188 . + 0 ID=cds-YP_498739.1;Parent=gene-SAOUHSC_00139;Dbxref=Genbank:YP_498739.1,GeneID:3919848;Name=YP_498739.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498739.1;transl_table=11 -NC_007795.1 RefSeq gene 145405 145764 . + . ID=gene-SAOUHSC_00141;Dbxref=GeneID:3919849;Name=SAOUHSC_00141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00141 -NC_007795.1 RefSeq CDS 145405 145764 . + 0 ID=cds-YP_498740.1;Parent=gene-SAOUHSC_00141;Dbxref=Genbank:YP_498740.1,GeneID:3919849;Name=YP_498740.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498740.1;transl_table=11 -NC_007795.1 RefSeq gene 145937 146962 . + . ID=gene-SAOUHSC_00142;Dbxref=GeneID:3919850;Name=SAOUHSC_00142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00142 -NC_007795.1 RefSeq CDS 145937 146962 . + 0 ID=cds-YP_498741.1;Parent=gene-SAOUHSC_00142;Dbxref=Genbank:YP_498741.1,GeneID:3919850;Name=YP_498741.1;Note=Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen%2C nitrate%2C sulphate or fumarate;gbkey=CDS;product=formate dehydrogenase;protein_id=YP_498741.1;transl_table=11 -NC_007795.1 RefSeq gene 147348 148598 . + . ID=gene-SAOUHSC_00143;Dbxref=GeneID:3919851;Name=SAOUHSC_00143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00143 -NC_007795.1 RefSeq CDS 147348 148598 . + 0 ID=cds-YP_498742.1;Parent=gene-SAOUHSC_00143;Dbxref=Genbank:YP_498742.1,GeneID:3919851;Name=YP_498742.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498742.1;transl_table=11 -NC_007795.1 RefSeq gene 149045 156220 . + . ID=gene-SAOUHSC_00144;Dbxref=GeneID:3919852;Name=SAOUHSC_00144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00144 -NC_007795.1 RefSeq CDS 149045 156220 . + 0 ID=cds-YP_498743.1;Parent=gene-SAOUHSC_00144;Dbxref=Genbank:YP_498743.1,GeneID:3919852;Name=YP_498743.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498743.1;transl_table=11 -NC_007795.1 RefSeq gene 156233 156877 . + . ID=gene-SAOUHSC_00145;Dbxref=GeneID:3919853;Name=SAOUHSC_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00145 -NC_007795.1 RefSeq CDS 156233 156877 . + 0 ID=cds-YP_498744.1;Parent=gene-SAOUHSC_00145;Dbxref=Genbank:YP_498744.1,GeneID:3919853;Name=YP_498744.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498744.1;transl_table=11 -NC_007795.1 RefSeq gene 157205 157684 . - . ID=gene-SAOUHSC_00146;Dbxref=GeneID:3919854;Name=SAOUHSC_00146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00146 -NC_007795.1 RefSeq CDS 157205 157684 . - 0 ID=cds-YP_498745.1;Parent=gene-SAOUHSC_00146;Dbxref=Genbank:YP_498745.1,GeneID:3919854;Name=YP_498745.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498745.1;transl_table=11 -NC_007795.1 RefSeq gene 157954 158718 . - . ID=gene-SAOUHSC_00147;Dbxref=GeneID:3919855;Name=SAOUHSC_00147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00147 -NC_007795.1 RefSeq CDS 157954 158718 . - 0 ID=cds-YP_498746.1;Parent=gene-SAOUHSC_00147;Dbxref=Genbank:YP_498746.1,GeneID:3919855;Name=YP_498746.1;Note=acetylglutamate kinase%2C putative;gbkey=CDS;product=acetylglutamate kinase;protein_id=YP_498746.1;transl_table=11 -NC_007795.1 RefSeq gene 158734 159975 . - . ID=gene-SAOUHSC_00148;Dbxref=GeneID:3919856;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=SAOUHSC_00148 -NC_007795.1 RefSeq CDS 158734 159975 . - 0 ID=cds-YP_498747.1;Parent=gene-SAOUHSC_00148;Dbxref=Genbank:YP_498747.1,GeneID:3919856;Name=YP_498747.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=YP_498747.1;transl_table=11 -NC_007795.1 RefSeq gene 159987 161018 . - . ID=gene-SAOUHSC_00149;Dbxref=GeneID:3919857;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=SAOUHSC_00149 -NC_007795.1 RefSeq CDS 159987 161018 . - 0 ID=cds-YP_498748.1;Parent=gene-SAOUHSC_00149;Dbxref=Genbank:YP_498748.1,GeneID:3919857;Name=YP_498748.1;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_498748.1;transl_table=11 -NC_007795.1 RefSeq gene 161057 162241 . - . ID=gene-SAOUHSC_00150;Dbxref=GeneID:3919858;Name=SAOUHSC_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00150 -NC_007795.1 RefSeq CDS 161057 162241 . - 0 ID=cds-YP_498749.1;Parent=gene-SAOUHSC_00150;Dbxref=Genbank:YP_498749.1,GeneID:3919858;Name=YP_498749.1;Note=ornithine aminotransferase%2C putative;gbkey=CDS;product=ornithine aminotransferase;protein_id=YP_498749.1;transl_table=11 -NC_007795.1 RefSeq gene 162494 163849 . - . ID=gene-SAOUHSC_00151;Dbxref=GeneID:3919859;Name=SAOUHSC_00151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00151 -NC_007795.1 RefSeq CDS 162494 163849 . - 0 ID=cds-YP_498750.1;Parent=gene-SAOUHSC_00151;Dbxref=Genbank:YP_498750.1,GeneID:3919859;Name=YP_498750.1;Note=branched-chain amino acid transport system II carrier protein;gbkey=CDS;product=branched-chain amino acid transport system II carrier protein;protein_id=YP_498750.1;transl_table=11 -NC_007795.1 RefSeq gene 164125 164622 . - . ID=gene-SAOUHSC_00152;Dbxref=GeneID:3919860;Name=SAOUHSC_00152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00152 -NC_007795.1 RefSeq CDS 164125 164622 . - 0 ID=cds-YP_498751.1;Parent=gene-SAOUHSC_00152;Dbxref=Genbank:YP_498751.1,GeneID:3919860;Name=YP_498751.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498751.1;transl_table=11 -NC_007795.1 RefSeq gene 164749 166389 . - . ID=gene-SAOUHSC_00153;Dbxref=GeneID:3919861;Name=SAOUHSC_00153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00153 -NC_007795.1 RefSeq CDS 164749 166389 . - 0 ID=cds-YP_498752.1;Parent=gene-SAOUHSC_00153;Dbxref=Genbank:YP_498752.1,GeneID:3919861;Name=YP_498752.1;Note=indolepyruvate decarboxylase%2C putative;gbkey=CDS;product=indolepyruvate decarboxylase;protein_id=YP_498752.1;transl_table=11 -NC_007795.1 RefSeq gene 166583 166684 . + . ID=gene-SAOUHSC_00154;Dbxref=GeneID:3919862;Name=SAOUHSC_00154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00154 -NC_007795.1 RefSeq CDS 166583 166684 . + 0 ID=cds-YP_498753.1;Parent=gene-SAOUHSC_00154;Dbxref=Genbank:YP_498753.1,GeneID:3919862;Name=YP_498753.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498753.1;transl_table=11 -NC_007795.1 RefSeq gene 166663 168660 . - . ID=gene-SAOUHSC_00155;Dbxref=GeneID:3919863;Name=SAOUHSC_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00155 -NC_007795.1 RefSeq CDS 166663 168660 . - 0 ID=cds-YP_498754.1;Parent=gene-SAOUHSC_00155;Dbxref=Genbank:YP_498754.1,GeneID:3919863;Name=YP_498754.1;Note=PTS system%2C glucose-specific component;gbkey=CDS;product=PTS system glucose-specific protein;protein_id=YP_498754.1;transl_table=11 -NC_007795.1 RefSeq gene 169309 170349 . + . ID=gene-SAOUHSC_00156;Dbxref=GeneID:3919864;Name=SAOUHSC_00156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00156 -NC_007795.1 RefSeq CDS 169309 170349 . + 0 ID=cds-YP_498755.1;Parent=gene-SAOUHSC_00156;Dbxref=Genbank:YP_498755.1,GeneID:3919864;Name=YP_498755.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498755.1;transl_table=11 -NC_007795.1 RefSeq gene 170349 171245 . + . ID=gene-SAOUHSC_00157;Dbxref=GeneID:3919865;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=SAOUHSC_00157 -NC_007795.1 RefSeq CDS 170349 171245 . + 0 ID=cds-YP_498756.1;Parent=gene-SAOUHSC_00157;Dbxref=Genbank:YP_498756.1,GeneID:3919865;Name=YP_498756.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid-6-phosphate etherase;protein_id=YP_498756.1;transl_table=11 -NC_007795.1 RefSeq gene 171257 172711 . + . ID=gene-SAOUHSC_00158;Dbxref=GeneID:3919866;Name=SAOUHSC_00158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00158 -NC_007795.1 RefSeq CDS 171257 172711 . + 0 ID=cds-YP_498757.1;Parent=gene-SAOUHSC_00158;Dbxref=Genbank:YP_498757.1,GeneID:3919866;Name=YP_498757.1;Note=PTS system component;gbkey=CDS;product=PTS system transporter;protein_id=YP_498757.1;transl_table=11 -NC_007795.1 RefSeq gene 172714 173589 . + . ID=gene-SAOUHSC_00160;Dbxref=GeneID:3919867;Name=SAOUHSC_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00160 -NC_007795.1 RefSeq CDS 172714 173589 . + 0 ID=cds-YP_498758.1;Parent=gene-SAOUHSC_00160;Dbxref=Genbank:YP_498758.1,GeneID:3919867;Name=YP_498758.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498758.1;transl_table=11 -NC_007795.1 RefSeq gene 173783 174064 . - . ID=gene-SAOUHSC_00161;Dbxref=GeneID:3919868;Name=SAOUHSC_00161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00161 -NC_007795.1 RefSeq CDS 173783 174064 . - 0 ID=cds-YP_498759.1;Parent=gene-SAOUHSC_00161;Dbxref=Genbank:YP_498759.1,GeneID:3919868;Name=YP_498759.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498759.1;transl_table=11 -NC_007795.1 RefSeq gene 174277 177066 . + . ID=gene-SAOUHSC_00162;Dbxref=GeneID:3919869;Name=SAOUHSC_00162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00162 -NC_007795.1 RefSeq CDS 174277 177066 . + 0 ID=cds-YP_498760.1;Parent=gene-SAOUHSC_00162;Dbxref=REBASE:Sau8325ORF162P,Genbank:YP_498760.1,GeneID:3919869;Name=YP_498760.1;Note=type I site-specific deoxyribonuclease%2C HsdR family%2C putative;gbkey=CDS;product=HsdR family type I site-specific deoxyribonuclease;protein_id=YP_498760.1;transl_table=11 -NC_007795.1 RefSeq gene 177271 178113 . + . ID=gene-SAOUHSC_00163;Dbxref=GeneID:3919870;Name=SAOUHSC_00163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00163 -NC_007795.1 RefSeq CDS 177271 178113 . + 0 ID=cds-YP_498761.1;Parent=gene-SAOUHSC_00163;Dbxref=Genbank:YP_498761.1,GeneID:3919870;Name=YP_498761.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498761.1;transl_table=11 -NC_007795.1 RefSeq gene 178115 179038 . + . ID=gene-SAOUHSC_00164;Dbxref=GeneID:3919871;Name=SAOUHSC_00164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00164 -NC_007795.1 RefSeq CDS 178115 179038 . + 0 ID=cds-YP_498762.1;Parent=gene-SAOUHSC_00164;Dbxref=Genbank:YP_498762.1,GeneID:3919871;Name=YP_498762.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498762.1;transl_table=11 -NC_007795.1 RefSeq gene 179025 180137 . + . ID=gene-SAOUHSC_00166;Dbxref=GeneID:3919872;Name=SAOUHSC_00166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00166 -NC_007795.1 RefSeq CDS 179025 180137 . + 0 ID=cds-YP_498763.1;Parent=gene-SAOUHSC_00166;Dbxref=Genbank:YP_498763.1,GeneID:3919872;Name=YP_498763.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498763.1;transl_table=11 -NC_007795.1 RefSeq gene 180402 181994 . - . ID=gene-SAOUHSC_00167;Dbxref=GeneID:3919873;Name=SAOUHSC_00167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00167 -NC_007795.1 RefSeq CDS 180402 181994 . - 0 ID=cds-YP_498764.1;Parent=gene-SAOUHSC_00167;Dbxref=Genbank:YP_498764.1,GeneID:3919873;Name=YP_498764.1;Note=peptide ABC transporter%2C ATP-binding protein%2C putative;gbkey=CDS;product=peptide ABC transporter ATP-binding protein;protein_id=YP_498764.1;transl_table=11 -NC_007795.1 RefSeq gene 181951 183429 . + . ID=gene-SAOUHSC_00168;Dbxref=GeneID:3919874;Name=SAOUHSC_00168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00168 -NC_007795.1 RefSeq CDS 181951 183429 . + 0 ID=cds-YP_498765.1;Parent=gene-SAOUHSC_00168;Dbxref=Genbank:YP_498765.1,GeneID:3919874;Name=YP_498765.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498765.1;transl_table=11 -NC_007795.1 RefSeq gene 183435 184598 . + . ID=gene-SAOUHSC_00169;Dbxref=GeneID:3919875;Name=SAOUHSC_00169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00169 -NC_007795.1 RefSeq CDS 183435 184598 . + 0 ID=cds-YP_498766.1;Parent=gene-SAOUHSC_00169;Dbxref=Genbank:YP_498766.1,GeneID:3919875;Name=YP_498766.1;Note=peptide ABC transporter%2C permease protein%2C putative;gbkey=CDS;product=peptide ABC transporter permease;protein_id=YP_498766.1;transl_table=11 -NC_007795.1 RefSeq gene 184615 186390 . + . ID=gene-SAOUHSC_00170;Dbxref=GeneID:3919876;Name=SAOUHSC_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00170 -NC_007795.1 RefSeq CDS 184615 186390 . + 0 ID=cds-YP_498767.1;Parent=gene-SAOUHSC_00170;Dbxref=Genbank:YP_498767.1,GeneID:3919876;Name=YP_498767.1;Note=conserved hypothetical protein;gbkey=CDS;product=RGD-containing lipoprotein;protein_id=YP_498767.1;transl_table=11 -NC_007795.1 RefSeq gene 186428 188434 . + . ID=gene-SAOUHSC_00171;Dbxref=GeneID:3919877;Name=SAOUHSC_00171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00171 -NC_007795.1 RefSeq CDS 186428 188434 . + 0 ID=cds-YP_498768.1;Parent=gene-SAOUHSC_00171;Dbxref=Genbank:YP_498768.1,GeneID:3919877;Name=YP_498768.1;Note=gamma-glutamyltranspeptidase%2C putative;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=YP_498768.1;transl_table=11 -NC_007795.1 RefSeq gene 188732 189505 . - . ID=gene-SAOUHSC_00172;Dbxref=GeneID:3919486;Name=SAOUHSC_00172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00172 -NC_007795.1 RefSeq CDS 188732 189505 . - 0 ID=cds-YP_498769.1;Parent=gene-SAOUHSC_00172;Dbxref=Genbank:YP_498769.1,GeneID:3919486;Name=YP_498769.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498769.1;transl_table=11 -NC_007795.1 RefSeq gene 189695 190321 . - . ID=gene-SAOUHSC_00173;Dbxref=GeneID:3919487;Name=SAOUHSC_00173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00173 -NC_007795.1 RefSeq CDS 189695 190321 . - 0 ID=cds-YP_498770.1;Parent=gene-SAOUHSC_00173;Dbxref=Genbank:YP_498770.1,GeneID:3919487;Name=YP_498770.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;product=azoreductase;protein_id=YP_498770.1;transl_table=11 -NC_007795.1 RefSeq gene 190530 191108 . + . ID=gene-SAOUHSC_00174;Dbxref=GeneID:3919488;Name=SAOUHSC_00174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00174 -NC_007795.1 RefSeq CDS 190530 191108 . + 0 ID=cds-YP_498771.1;Parent=gene-SAOUHSC_00174;Dbxref=Genbank:YP_498771.1,GeneID:3919488;Name=YP_498771.1;Note=M23/M37 peptidase domain protein;gbkey=CDS;product=M23/M37 peptidase domain-containing protein;protein_id=YP_498771.1;transl_table=11 -NC_007795.1 RefSeq gene 191491 192588 . + . ID=gene-SAOUHSC_00175;Dbxref=GeneID:3919489;Name=SAOUHSC_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00175 -NC_007795.1 RefSeq CDS 191491 192588 . + 0 ID=cds-YP_498772.1;Parent=gene-SAOUHSC_00175;Dbxref=Genbank:YP_498772.1,GeneID:3919489;Name=YP_498772.1;Note=multiple sugar-binding transport ATP-binding protein%2C putative;gbkey=CDS;product=multiple sugar-binding transport ATP-binding protein;protein_id=YP_498772.1;transl_table=11 -NC_007795.1 RefSeq gene 192601 193872 . + . ID=gene-SAOUHSC_00176;Dbxref=GeneID:3919490;Name=SAOUHSC_00176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00176 -NC_007795.1 RefSeq CDS 192601 193872 . + 0 ID=cds-YP_498773.1;Parent=gene-SAOUHSC_00176;Dbxref=Genbank:YP_498773.1,GeneID:3919490;Name=YP_498773.1;Note=bacterial extracellular solute-binding protein%2C putative;gbkey=CDS;product=extracellular solute-binding protein;protein_id=YP_498773.1;transl_table=11 -NC_007795.1 RefSeq gene 193875 195143 . + . ID=gene-SAOUHSC_00177;Dbxref=GeneID:3919491;Name=SAOUHSC_00177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00177 -NC_007795.1 RefSeq CDS 193875 195143 . + 0 ID=cds-YP_498774.1;Parent=gene-SAOUHSC_00177;Dbxref=Genbank:YP_498774.1,GeneID:3919491;Name=YP_498774.1;Note=maltose ABC transporter%2C permease protein%2C putative;gbkey=CDS;product=maltose ABC transporter permease;protein_id=YP_498774.1;transl_table=11 -NC_007795.1 RefSeq gene 195145 195984 . + . ID=gene-SAOUHSC_00178;Dbxref=GeneID:3919492;Name=SAOUHSC_00178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00178 -NC_007795.1 RefSeq CDS 195145 195984 . + 0 ID=cds-YP_498775.1;Parent=gene-SAOUHSC_00178;Dbxref=Genbank:YP_498775.1,GeneID:3919492;Name=YP_498775.1;Note=maltose ABC transporter%2C permease protein;gbkey=CDS;product=maltose ABC transporter permease;protein_id=YP_498775.1;transl_table=11 -NC_007795.1 RefSeq gene 196058 197134 . + . ID=gene-SAOUHSC_00179;Dbxref=GeneID:3919493;Name=SAOUHSC_00179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00179 -NC_007795.1 RefSeq CDS 196058 197134 . + 0 ID=cds-YP_498776.1;Parent=gene-SAOUHSC_00179;Dbxref=Genbank:YP_498776.1,GeneID:3919493;Name=YP_498776.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498776.1;transl_table=11 -NC_007795.1 RefSeq gene 197159 198199 . + . ID=gene-SAOUHSC_00180;Dbxref=GeneID:3919494;Name=SAOUHSC_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00180 -NC_007795.1 RefSeq CDS 197159 198199 . + 0 ID=cds-YP_498777.1;Parent=gene-SAOUHSC_00180;Dbxref=Genbank:YP_498777.1,GeneID:3919494;Name=YP_498777.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498777.1;transl_table=11 -NC_007795.1 RefSeq gene 198254 199222 . + . ID=gene-SAOUHSC_00181;Dbxref=GeneID:3919495;Name=SAOUHSC_00181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00181 -NC_007795.1 RefSeq CDS 198254 199222 . + 0 ID=cds-YP_498778.1;Parent=gene-SAOUHSC_00181;Dbxref=Genbank:YP_498778.1,GeneID:3919495;Name=YP_498778.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498778.1;transl_table=11 -NC_007795.1 RefSeq gene 199583 200155 . - . ID=gene-SAOUHSC_00182;Dbxref=GeneID:3919496;Name=SAOUHSC_00182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00182 -NC_007795.1 RefSeq CDS 199583 200155 . - 0 ID=cds-YP_498779.1;Parent=gene-SAOUHSC_00182;Dbxref=Genbank:YP_498779.1,GeneID:3919496;Name=YP_498779.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498779.1;transl_table=11 -NC_007795.1 RefSeq gene 200310 201689 . + . ID=gene-SAOUHSC_00183;Dbxref=GeneID:3919497;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=SAOUHSC_00183 -NC_007795.1 RefSeq CDS 200310 201689 . + 0 ID=cds-YP_498780.1;Parent=gene-SAOUHSC_00183;Dbxref=Genbank:YP_498780.1,GeneID:3919497;Name=YP_498780.1;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate;gbkey=CDS;gene=uhpT;product=sugar phosphate antiporter;protein_id=YP_498780.1;transl_table=11 -NC_007795.1 RefSeq gene 202048 202806 . - . ID=gene-SAOUHSC_00184;Dbxref=GeneID:3919498;Name=SAOUHSC_00184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00184 -NC_007795.1 RefSeq CDS 202048 202806 . - 0 ID=cds-YP_498781.1;Parent=gene-SAOUHSC_00184;Dbxref=Genbank:YP_498781.1,GeneID:3919498;Name=YP_498781.1;Note=Response regulator receiver domain protein;gbkey=CDS;product=response regulator receiver domain-containing protein;protein_id=YP_498781.1;transl_table=11 -NC_007795.1 RefSeq gene 202799 204355 . - . ID=gene-SAOUHSC_00185;Dbxref=GeneID:3919499;Name=SAOUHSC_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00185 -NC_007795.1 RefSeq CDS 202799 204355 . - 0 ID=cds-YP_498782.1;Parent=gene-SAOUHSC_00185;Dbxref=Genbank:YP_498782.1,GeneID:3919499;Name=YP_498782.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498782.1;transl_table=11 -NC_007795.1 RefSeq gene 204352 205320 . - . ID=gene-SAOUHSC_00186;Dbxref=GeneID:3919500;Name=SAOUHSC_00186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00186 -NC_007795.1 RefSeq CDS 204352 205320 . - 0 ID=cds-YP_498783.1;Parent=gene-SAOUHSC_00186;Dbxref=Genbank:YP_498783.1,GeneID:3919500;Name=YP_498783.1;Note=lipoprotein%2C putative;gbkey=CDS;product=lipoprotein;protein_id=YP_498783.1;transl_table=11 -NC_007795.1 RefSeq gene 205908 208157 . + . ID=gene-SAOUHSC_00187;Dbxref=GeneID:3919501;Name=SAOUHSC_00187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00187 -NC_007795.1 RefSeq CDS 205908 208157 . + 0 ID=cds-YP_498784.1;Parent=gene-SAOUHSC_00187;Dbxref=Genbank:YP_498784.1,GeneID:3919501;Name=YP_498784.1;Note=formate acetyltransferase;gbkey=CDS;product=formate acetyltransferase;protein_id=YP_498784.1;transl_table=11 -NC_007795.1 RefSeq gene 208180 208935 . + . ID=gene-SAOUHSC_00188;Dbxref=GeneID:3919502;Name=SAOUHSC_00188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00188 -NC_007795.1 RefSeq CDS 208180 208935 . + 0 ID=cds-YP_498785.1;Parent=gene-SAOUHSC_00188;Dbxref=Genbank:YP_498785.1,GeneID:3919502;Name=YP_498785.1;Note=pyruvate formate-lyase 1 activating enzyme%2C putative;gbkey=CDS;product=pyruvate formate-lyase 1 activating enzyme;protein_id=YP_498785.1;transl_table=11 -NC_007795.1 RefSeq pseudogene 208925 209233 . + . ID=gene-SAOUHSC_00189;Dbxref=GeneID:3919503;Name=SAOUHSC_00189;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SAOUHSC_00189;pseudo=true;pseudogene=unknown -NC_007795.1 RefSeq gene 209271 211034 . + . ID=gene-SAOUHSC_00190;Dbxref=GeneID:3919504;Name=SAOUHSC_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00190 -NC_007795.1 RefSeq CDS 209271 211034 . + 0 ID=cds-YP_498787.1;Parent=gene-SAOUHSC_00190;Dbxref=Genbank:YP_498787.1,GeneID:3919504;Name=YP_498787.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498787.1;transl_table=11 -NC_007795.1 RefSeq gene 211198 211542 . - . ID=gene-SAOUHSC_00191;Dbxref=GeneID:3919505;Name=SAOUHSC_00191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00191 -NC_007795.1 RefSeq CDS 211198 211542 . - 0 ID=cds-YP_498788.1;Parent=gene-SAOUHSC_00191;Dbxref=Genbank:YP_498788.1,GeneID:3919505;Name=YP_498788.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498788.1;transl_table=11 -NC_007795.1 RefSeq gene 211732 213642 . + . ID=gene-SAOUHSC_00192;Dbxref=GeneID:3920348;Name=SAOUHSC_00192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00192 -NC_007795.1 RefSeq CDS 211732 213642 . + 0 ID=cds-YP_498789.1;Parent=gene-SAOUHSC_00192;Dbxref=Genbank:YP_498789.1,GeneID:3920348;Name=YP_498789.1;Note=coagulase;gbkey=CDS;product=staphylocoagulase;protein_id=YP_498789.1;transl_table=11 -NC_007795.1 RefSeq gene 213824 213931 . - . ID=gene-SAOUHSC_00193;Dbxref=GeneID:3920349;Name=SAOUHSC_00193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00193 -NC_007795.1 RefSeq CDS 213824 213931 . - 0 ID=cds-YP_498790.1;Parent=gene-SAOUHSC_00193;Dbxref=Genbank:YP_498790.1,GeneID:3920349;Name=YP_498790.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498790.1;transl_table=11 -NC_007795.1 RefSeq gene 214246 215430 . - . ID=gene-SAOUHSC_00195;Dbxref=GeneID:3920351;Name=SAOUHSC_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00195 -NC_007795.1 RefSeq CDS 214246 215430 . - 0 ID=cds-YP_498792.1;Parent=gene-SAOUHSC_00195;Dbxref=Genbank:YP_498792.1,GeneID:3920351;Name=YP_498792.1;Note=acetyl-CoA acetyltransferase%2C putative;gbkey=CDS;product=acetyl-CoA acetyltransferase;protein_id=YP_498792.1;transl_table=11 -NC_007795.1 RefSeq gene 215460 217721 . - . ID=gene-SAOUHSC_00196;Dbxref=GeneID:3920352;Name=SAOUHSC_00196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00196 -NC_007795.1 RefSeq CDS 215460 217721 . - 0 ID=cds-YP_498793.1;Parent=gene-SAOUHSC_00196;Dbxref=Genbank:YP_498793.1,GeneID:3920352;Name=YP_498793.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498793.1;transl_table=11 -NC_007795.1 RefSeq gene 217907 219118 . - . ID=gene-SAOUHSC_00197;Dbxref=GeneID:3920353;Name=SAOUHSC_00197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00197 -NC_007795.1 RefSeq CDS 217907 219118 . - 0 ID=cds-YP_498794.1;Parent=gene-SAOUHSC_00197;Dbxref=Genbank:YP_498794.1,GeneID:3920353;Name=YP_498794.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498794.1;transl_table=11 -NC_007795.1 RefSeq gene 219230 220735 . - . ID=gene-SAOUHSC_00198;Dbxref=GeneID:3920354;Name=SAOUHSC_00198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00198 -NC_007795.1 RefSeq CDS 219230 220735 . - 0 ID=cds-YP_498795.1;Parent=gene-SAOUHSC_00198;Dbxref=Genbank:YP_498795.1,GeneID:3920354;Name=YP_498795.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498795.1;transl_table=11 -NC_007795.1 RefSeq gene 220761 222338 . - . ID=gene-SAOUHSC_00199;Dbxref=GeneID:3920355;Name=SAOUHSC_00199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00199 -NC_007795.1 RefSeq CDS 220761 222338 . - 0 ID=cds-YP_498796.1;Parent=gene-SAOUHSC_00199;Dbxref=Genbank:YP_498796.1,GeneID:3920355;Name=YP_498796.1;Note=conserved hypothetical protein;gbkey=CDS;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=YP_498796.1;transl_table=11 -NC_007795.1 RefSeq gene 222779 223921 . + . ID=gene-SAOUHSC_00200;Dbxref=GeneID:3920356;Name=SAOUHSC_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00200 -NC_007795.1 RefSeq CDS 222779 223921 . + 0 ID=cds-YP_498797.1;Parent=gene-SAOUHSC_00200;Dbxref=Genbank:YP_498797.1,GeneID:3920356;Name=YP_498797.1;Note=membrane protein%2C putative;gbkey=CDS;product=hypothetical protein;protein_id=YP_498797.1;transl_table=11 -NC_007795.1 RefSeq gene 224235 225647 . - . ID=gene-SAOUHSC_00201;Dbxref=GeneID:3920357;Name=SAOUHSC_00201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00201 -NC_007795.1 RefSeq CDS 224235 225647 . - 0 ID=cds-YP_498798.1;Parent=gene-SAOUHSC_00201;Dbxref=Genbank:YP_498798.1,GeneID:3920357;Name=YP_498798.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498798.1;transl_table=11 -NC_007795.1 RefSeq gene 225908 226264 . - . ID=gene-SAOUHSC_00202;Dbxref=GeneID:3920358;Name=SAOUHSC_00202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00202 -NC_007795.1 RefSeq CDS 225908 226264 . - 0 ID=cds-YP_498799.1;Parent=gene-SAOUHSC_00202;Dbxref=Genbank:YP_498799.1,GeneID:3920358;Name=YP_498799.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498799.1;transl_table=11 -NC_007795.1 RefSeq gene 226421 226594 . - . ID=gene-SAOUHSC_00203;Dbxref=GeneID:3920359;Name=SAOUHSC_00203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00203 -NC_007795.1 RefSeq CDS 226421 226594 . - 0 ID=cds-YP_498800.1;Parent=gene-SAOUHSC_00203;Dbxref=Genbank:YP_498800.1,GeneID:3920359;Name=YP_498800.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498800.1;transl_table=11 -NC_007795.1 RefSeq gene 226620 227765 . - . ID=gene-SAOUHSC_00204;Dbxref=GeneID:3920360;Name=SAOUHSC_00204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00204 -NC_007795.1 RefSeq CDS 226620 227765 . - 0 ID=cds-YP_498801.1;Parent=gene-SAOUHSC_00204;Dbxref=Genbank:YP_498801.1,GeneID:3920360;Name=YP_498801.1;Note=Globin domain protein;gbkey=CDS;product=globin domain-containing protein;protein_id=YP_498801.1;transl_table=11 -NC_007795.1 RefSeq gene 227920 228027 . + . ID=gene-SAOUHSC_00205;Dbxref=GeneID:3920361;Name=SAOUHSC_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00205 -NC_007795.1 RefSeq CDS 227920 228027 . + 0 ID=cds-YP_498802.1;Parent=gene-SAOUHSC_00205;Dbxref=Genbank:YP_498802.1,GeneID:3920361;Name=YP_498802.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498802.1;transl_table=11 -NC_007795.1 RefSeq gene 228482 229291 . + . ID=gene-SAOUHSC_00206;Dbxref=GeneID:3920362;Name=SAOUHSC_00206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00206 -NC_007795.1 RefSeq CDS 228482 229291 . + 0 ID=cds-YP_498803.1;Parent=gene-SAOUHSC_00206;Dbxref=Genbank:YP_498803.1,GeneID:3920362;Name=YP_498803.1;Note=L-lactate dehydrogenase;gbkey=CDS;product=L-lactate dehydrogenase;protein_id=YP_498803.1;transl_table=11 -NC_007795.1 RefSeq gene 229502 229645 . + . ID=gene-SAOUHSC_00208;Dbxref=GeneID:3920363;Name=SAOUHSC_00208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00208 -NC_007795.1 RefSeq CDS 229502 229645 . + 0 ID=cds-YP_498804.1;Parent=gene-SAOUHSC_00208;Dbxref=Genbank:YP_498804.1,GeneID:3920363;Name=YP_498804.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498804.1;transl_table=11 -NC_007795.1 RefSeq gene 229611 231140 . - . ID=gene-SAOUHSC_00209;Dbxref=GeneID:3920364;Name=SAOUHSC_00209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00209 -NC_007795.1 RefSeq CDS 229611 231140 . - 0 ID=cds-YP_498805.1;Parent=gene-SAOUHSC_00209;Dbxref=Genbank:YP_498805.1,GeneID:3920364;Name=YP_498805.1;Note=PTS system%2C glucose-specific IIBC component%2C putative;gbkey=CDS;product=PTS system glucose-specific transporter subunit IIBC;protein_id=YP_498805.1;transl_table=11 -NC_007795.1 RefSeq gene 231502 232437 . + . ID=gene-SAOUHSC_00211;Dbxref=GeneID:3920365;Name=SAOUHSC_00211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00211 -NC_007795.1 RefSeq CDS 231502 232437 . + 0 ID=cds-YP_498806.1;Parent=gene-SAOUHSC_00211;Dbxref=Genbank:YP_498806.1,GeneID:3920365;Name=YP_498806.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498806.1;transl_table=11 -NC_007795.1 RefSeq gene 232547 232645 . + . ID=gene-SAOUHSC_00212;Dbxref=GeneID:3920366;Name=SAOUHSC_00212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00212 -NC_007795.1 RefSeq CDS 232547 232645 . + 0 ID=cds-YP_498807.1;Parent=gene-SAOUHSC_00212;Dbxref=Genbank:YP_498807.1,GeneID:3920366;Name=YP_498807.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498807.1;transl_table=11 -NC_007795.1 RefSeq gene 232776 234872 . + . ID=gene-SAOUHSC_00213;Dbxref=GeneID:3920289;Name=SAOUHSC_00213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00213 -NC_007795.1 RefSeq CDS 232776 234872 . + 0 ID=cds-YP_498808.1;Parent=gene-SAOUHSC_00213;Dbxref=Genbank:YP_498808.1,GeneID:3920289;Name=YP_498808.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498808.1;transl_table=11 -NC_007795.1 RefSeq gene 234857 235324 . + . ID=gene-SAOUHSC_00214;Dbxref=GeneID:3920290;Name=SAOUHSC_00214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00214 -NC_007795.1 RefSeq CDS 234857 235324 . + 0 ID=cds-YP_498809.1;Parent=gene-SAOUHSC_00214;Dbxref=Genbank:YP_498809.1,GeneID:3920290;Name=YP_498809.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C putative;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=YP_498809.1;transl_table=11 -NC_007795.1 RefSeq gene 235347 235625 . + . ID=gene-SAOUHSC_00215;Dbxref=GeneID:3920291;Name=SAOUHSC_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00215 -NC_007795.1 RefSeq CDS 235347 235625 . + 0 ID=cds-YP_498810.1;Parent=gene-SAOUHSC_00215;Dbxref=Genbank:YP_498810.1,GeneID:3920291;Name=YP_498810.1;Note=PTS system component%2C putative;gbkey=CDS;product=PTS system transporter;protein_id=YP_498810.1;transl_table=11 -NC_007795.1 RefSeq gene 235852 237111 . + . ID=gene-SAOUHSC_00216;Dbxref=GeneID:3920292;Name=SAOUHSC_00216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00216 -NC_007795.1 RefSeq CDS 235852 237111 . + 0 ID=cds-YP_498811.1;Parent=gene-SAOUHSC_00216;Dbxref=Genbank:YP_498811.1,GeneID:3920292;Name=YP_498811.1;Note=PTS system component;gbkey=CDS;product=PTS system transporter;protein_id=YP_498811.1;transl_table=11 -NC_007795.1 RefSeq gene 237129 238184 . + . ID=gene-SAOUHSC_00217;Dbxref=GeneID:3920293;Name=SAOUHSC_00217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00217 -NC_007795.1 RefSeq CDS 237129 238184 . + 0 ID=cds-YP_498812.1;Parent=gene-SAOUHSC_00217;Dbxref=Genbank:YP_498812.1,GeneID:3920293;Name=YP_498812.1;Note=sorbitol dehydrogenase%2C putative;gbkey=CDS;product=sorbitol dehydrogenase;protein_id=YP_498812.1;transl_table=11 -NC_007795.1 RefSeq gene 238186 238332 . + . ID=gene-SAOUHSC_00218;Dbxref=GeneID:3920294;Name=SAOUHSC_00218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00218 -NC_007795.1 RefSeq CDS 238186 238332 . + 0 ID=cds-YP_498813.1;Parent=gene-SAOUHSC_00218;Dbxref=Genbank:YP_498813.1,GeneID:3920294;Name=YP_498813.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498813.1;transl_table=11 -NC_007795.1 RefSeq gene 238356 239399 . + . ID=gene-SAOUHSC_00219;Dbxref=GeneID:3920295;Name=SAOUHSC_00219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00219 -NC_007795.1 RefSeq CDS 238356 239399 . + 0 ID=cds-YP_498814.1;Parent=gene-SAOUHSC_00219;Dbxref=Genbank:YP_498814.1,GeneID:3920295;Name=YP_498814.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498814.1;transl_table=11 -NC_007795.1 RefSeq gene 239969 240643 . + . ID=gene-SAOUHSC_00220;Dbxref=GeneID:3920296;Name=SAOUHSC_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00220 -NC_007795.1 RefSeq CDS 239969 240643 . + 0 ID=cds-YP_498815.1;Parent=gene-SAOUHSC_00220;Dbxref=Genbank:YP_498815.1,GeneID:3920296;Name=YP_498815.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_498815.1;transl_table=11 -NC_007795.1 RefSeq gene 240636 241661 . + . ID=gene-SAOUHSC_00221;Dbxref=GeneID:3920297;Name=SAOUHSC_00221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00221 -NC_007795.1 RefSeq CDS 240636 241661 . + 0 ID=cds-YP_498816.1;Parent=gene-SAOUHSC_00221;Dbxref=Genbank:YP_498816.1,GeneID:3920297;Name=YP_498816.1;Note=alcohol dehydrogenase%2C zinc-containing;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_498816.1;transl_table=11 -NC_007795.1 RefSeq gene 241836 243377 . + . ID=gene-SAOUHSC_00222;Dbxref=GeneID:3920298;Name=SAOUHSC_00222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00222 -NC_007795.1 RefSeq CDS 241836 243377 . + 0 ID=cds-YP_498818.1;Parent=gene-SAOUHSC_00222;Dbxref=Genbank:YP_498818.1,GeneID:3920298;Name=YP_498818.1;Note=tagB protein%2C putative;gbkey=CDS;product=teichoic acid biosynthesis protein TagB;protein_id=YP_498818.1;transl_table=11 -NC_007795.1 RefSeq gene 243805 244974 . + . ID=gene-SAOUHSC_00223;Dbxref=GeneID:3920299;Name=SAOUHSC_00223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00223 -NC_007795.1 RefSeq CDS 243805 244974 . + 0 ID=cds-YP_498819.1;Parent=gene-SAOUHSC_00223;Dbxref=Genbank:YP_498819.1,GeneID:3920299;Name=YP_498819.1;Note=teichoic acid biosynthesis protein F%2C putative;gbkey=CDS;product=teichoic acid biosynthesis protein F;protein_id=YP_498819.1;transl_table=11 -NC_007795.1 RefSeq gene 245250 245966 . + . ID=gene-SAOUHSC_00225;Dbxref=GeneID:3920300;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=SAOUHSC_00225 -NC_007795.1 RefSeq CDS 245250 245966 . + 0 ID=cds-YP_498820.1;Parent=gene-SAOUHSC_00225;Dbxref=Genbank:YP_498820.1,GeneID:3920300;Name=YP_498820.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;gene=ispD;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_498820.1;transl_table=11 -NC_007795.1 RefSeq gene 245959 246984 . + . ID=gene-SAOUHSC_00226;Dbxref=GeneID:3920301;Name=SAOUHSC_00226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00226 -NC_007795.1 RefSeq CDS 245959 246984 . + 0 ID=cds-YP_498821.1;Parent=gene-SAOUHSC_00226;Dbxref=Genbank:YP_498821.1,GeneID:3920301;Name=YP_498821.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498821.1;transl_table=11 -NC_007795.1 RefSeq gene 247006 248694 . + . ID=gene-SAOUHSC_00227;Dbxref=GeneID:3920302;Name=SAOUHSC_00227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00227 -NC_007795.1 RefSeq CDS 247006 248694 . + 0 ID=cds-YP_498822.1;Parent=gene-SAOUHSC_00227;Dbxref=Genbank:YP_498822.1,GeneID:3920302;Name=YP_498822.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498822.1;transl_table=11 -NC_007795.1 RefSeq gene 248727 250451 . + . ID=gene-SAOUHSC_00228;Dbxref=GeneID:3920303;Name=SAOUHSC_00228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00228 -NC_007795.1 RefSeq CDS 248727 250451 . + 0 ID=cds-YP_498823.1;Parent=gene-SAOUHSC_00228;Dbxref=Genbank:YP_498823.1,GeneID:3920303;Name=YP_498823.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498823.1;transl_table=11 -NC_007795.1 RefSeq gene 250591 251265 . + . ID=gene-SAOUHSC_00229;Dbxref=GeneID:3920304;Name=SAOUHSC_00229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00229 -NC_007795.1 RefSeq CDS 250591 251265 . + 0 ID=cds-YP_498824.1;Parent=gene-SAOUHSC_00229;Dbxref=Genbank:YP_498824.1,GeneID:3920304;Name=YP_498824.1;Note=involved in peptidoglycan cross-linking;gbkey=CDS;product=cell wall biosynthesis protein ScdA;protein_id=YP_498824.1;transl_table=11 -NC_007795.1 RefSeq gene 251527 253266 . + . ID=gene-SAOUHSC_00230;Dbxref=GeneID:3920305;Name=SAOUHSC_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00230 -NC_007795.1 RefSeq CDS 251527 253266 . + 0 ID=cds-YP_498825.1;Parent=gene-SAOUHSC_00230;Dbxref=Genbank:YP_498825.1,GeneID:3920305;Name=YP_498825.1;Note=two-component sensor histidine kinase%2C putative;gbkey=CDS;product=two-component sensor histidine kinase;protein_id=YP_498825.1;transl_table=11 -NC_007795.1 RefSeq gene 253269 254009 . + . ID=gene-SAOUHSC_00231;Dbxref=GeneID:3920306;Name=SAOUHSC_00231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00231 -NC_007795.1 RefSeq CDS 253269 254009 . + 0 ID=cds-YP_498826.1;Parent=gene-SAOUHSC_00231;Dbxref=Genbank:YP_498826.1,GeneID:3920306;Name=YP_498826.1;Note=two-component response regulator%2C putative;gbkey=CDS;product=two-component response regulator;protein_id=YP_498826.1;transl_table=11 -NC_007795.1 RefSeq gene 254122 254565 . + . ID=gene-SAOUHSC_00232;Dbxref=GeneID:3920307;Name=SAOUHSC_00232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00232 -NC_007795.1 RefSeq CDS 254122 254565 . + 0 ID=cds-YP_498827.1;Parent=gene-SAOUHSC_00232;Dbxref=Genbank:YP_498827.1,GeneID:3920307;Name=YP_498827.1;Note=negatively regulates murein hydrolase activity;gbkey=CDS;product=murein hydrolase regulator LrgA;protein_id=YP_498827.1;transl_table=11 -NC_007795.1 RefSeq gene 254558 255259 . + . ID=gene-SAOUHSC_00233;Dbxref=GeneID:3920308;Name=SAOUHSC_00233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00233 -NC_007795.1 RefSeq CDS 254558 255259 . + 0 ID=cds-YP_498828.1;Parent=gene-SAOUHSC_00233;Dbxref=Genbank:YP_498828.1,GeneID:3920308;Name=YP_498828.1;Note=in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases;gbkey=CDS;product=antiholin-like protein LrgB;protein_id=YP_498828.1;transl_table=11 -NC_007795.1 RefSeq gene 255367 256071 . - . ID=gene-SAOUHSC_00234;Dbxref=GeneID:3919254;Name=SAOUHSC_00234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00234 -NC_007795.1 RefSeq CDS 255367 256071 . - 0 ID=cds-YP_498829.1;Parent=gene-SAOUHSC_00234;Dbxref=Genbank:YP_498829.1,GeneID:3919254;Name=YP_498829.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498829.1;transl_table=11 -NC_007795.1 RefSeq gene 256220 257011 . + . ID=gene-SAOUHSC_00235;Dbxref=GeneID:3919255;Name=SAOUHSC_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00235 -NC_007795.1 RefSeq CDS 256220 257011 . + 0 ID=cds-YP_498830.1;Parent=gene-SAOUHSC_00235;Dbxref=Genbank:YP_498830.1,GeneID:3919255;Name=YP_498830.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498830.1;transl_table=11 -NC_007795.1 RefSeq gene 257027 258463 . + . ID=gene-SAOUHSC_00236;Dbxref=GeneID:3919256;Name=SAOUHSC_00236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00236 -NC_007795.1 RefSeq CDS 257027 258463 . + 0 ID=cds-YP_498831.1;Parent=gene-SAOUHSC_00236;Dbxref=Genbank:YP_498831.1,GeneID:3919256;Name=YP_498831.1;Note=6-phospho-beta-glucosidase%2C putative;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=YP_498831.1;transl_table=11 -NC_007795.1 RefSeq gene 258896 259657 . - . ID=gene-SAOUHSC_00237;Dbxref=GeneID:3919257;Name=SAOUHSC_00237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00237 -NC_007795.1 RefSeq CDS 258896 259657 . - 0 ID=cds-YP_498832.1;Parent=gene-SAOUHSC_00237;Dbxref=Genbank:YP_498832.1,GeneID:3919257;Name=YP_498832.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498832.1;transl_table=11 -NC_007795.1 RefSeq gene 259676 259810 . + . ID=gene-SAOUHSC_00238;Dbxref=GeneID:3919258;Name=SAOUHSC_00238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00238 -NC_007795.1 RefSeq CDS 259676 259810 . + 0 ID=cds-YP_498833.1;Parent=gene-SAOUHSC_00238;Dbxref=Genbank:YP_498833.1,GeneID:3919258;Name=YP_498833.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_498833.1;transl_table=11 -NC_007795.1 RefSeq gene 259908 260822 . - . ID=gene-SAOUHSC_00239;Dbxref=GeneID:3919259;Name=SAOUHSC_00239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00239 -NC_007795.1 RefSeq CDS 259908 260822 . - 0 ID=cds-YP_498834.1;Parent=gene-SAOUHSC_00239;Dbxref=Genbank:YP_498834.1,GeneID:3919259;Name=YP_498834.1;Note=ribokinase%2C putative;gbkey=CDS;product=ribokinase;protein_id=YP_498834.1;transl_table=11 -NC_007795.1 RefSeq gene 260850 261254 . - . ID=gene-SAOUHSC_00240;Dbxref=GeneID:3919260;Name=SAOUHSC_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00240 -NC_007795.1 RefSeq CDS 260850 261254 . - 0 ID=cds-YP_498835.1;Parent=gene-SAOUHSC_00240;Dbxref=Genbank:YP_498835.1,GeneID:3919260;Name=YP_498835.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;product=D-ribose pyranase;protein_id=YP_498835.1;transl_table=11 -NC_007795.1 RefSeq gene 261269 262150 . - . ID=gene-SAOUHSC_00241;Dbxref=GeneID:3919261;Name=SAOUHSC_00241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00241 -NC_007795.1 RefSeq CDS 261269 262150 . - 0 ID=cds-YP_498836.1;Parent=gene-SAOUHSC_00241;Dbxref=Genbank:YP_498836.1,GeneID:3919261;Name=YP_498836.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498836.1;transl_table=11 -NC_007795.1 RefSeq gene 262382 263380 . - . ID=gene-SAOUHSC_00242;Dbxref=GeneID:3919262;Name=SAOUHSC_00242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00242 -NC_007795.1 RefSeq CDS 262382 263380 . - 0 ID=cds-YP_498837.1;Parent=gene-SAOUHSC_00242;Dbxref=Genbank:YP_498837.1,GeneID:3919262;Name=YP_498837.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498837.1;transl_table=11 -NC_007795.1 RefSeq gene 263531 263710 . + . ID=gene-SAOUHSC_00243;Dbxref=GeneID:3919263;Name=SAOUHSC_00243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00243 -NC_007795.1 RefSeq CDS 263531 263710 . + 0 ID=cds-YP_498838.1;Parent=gene-SAOUHSC_00243;Dbxref=Genbank:YP_498838.1,GeneID:3919263;Name=YP_498838.1;Note=NADH dehydrogenase subunit%2C putative;gbkey=CDS;product=NADH dehydrogenase subunit;protein_id=YP_498838.1;transl_table=11 -NC_007795.1 RefSeq gene 263760 264152 . + . ID=gene-SAOUHSC_00244;Dbxref=GeneID:3919264;Name=SAOUHSC_00244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00244 -NC_007795.1 RefSeq CDS 263760 264152 . + 0 ID=cds-YP_498839.1;Parent=gene-SAOUHSC_00244;Dbxref=Genbank:YP_498839.1,GeneID:3919264;Name=YP_498839.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498839.1;transl_table=11 -NC_007795.1 RefSeq gene 264825 266201 . - . ID=gene-SAOUHSC_00246;Dbxref=GeneID:3919266;Name=SAOUHSC_00246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00246 -NC_007795.1 RefSeq CDS 264825 266201 . - 0 ID=cds-YP_498841.1;Parent=gene-SAOUHSC_00246;Dbxref=Genbank:YP_498841.1,GeneID:3919266;Name=YP_498841.1;Note=drug transporter%2C putative;gbkey=CDS;product=drug transporter;protein_id=YP_498841.1;transl_table=11 -NC_007795.1 RefSeq gene 266435 267427 . + . ID=gene-SAOUHSC_00247;Dbxref=GeneID:3919267;Name=SAOUHSC_00247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00247 -NC_007795.1 RefSeq CDS 266435 267427 . + 0 ID=cds-YP_498842.1;Parent=gene-SAOUHSC_00247;Dbxref=Genbank:YP_498842.1,GeneID:3919267;Name=YP_498842.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498842.1;transl_table=11 -NC_007795.1 RefSeq gene 267753 268703 . + . ID=gene-SAOUHSC_00248;Dbxref=GeneID:3919268;Name=SAOUHSC_00248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00248 -NC_007795.1 RefSeq CDS 267753 268703 . + 0 ID=cds-YP_498843.1;Parent=gene-SAOUHSC_00248;Dbxref=Genbank:YP_498843.1,GeneID:3919268;Name=YP_498843.1;Note=peptidoglycan hydrolase%2C putative;gbkey=CDS;product=peptidoglycan hydrolase;protein_id=YP_498843.1;transl_table=11 -NC_007795.1 RefSeq gene 268755 269414 . - . ID=gene-SAOUHSC_00249;Dbxref=GeneID:3919269;Name=SAOUHSC_00249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00249 -NC_007795.1 RefSeq CDS 268755 269414 . - 0 ID=cds-YP_498844.1;Parent=gene-SAOUHSC_00249;Dbxref=Genbank:YP_498844.1,GeneID:3919269;Name=YP_498844.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498844.1;transl_table=11 -NC_007795.1 RefSeq gene 269428 270348 . - . ID=gene-SAOUHSC_00250;Dbxref=GeneID:3919270;Name=SAOUHSC_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00250 -NC_007795.1 RefSeq CDS 269428 270348 . - 0 ID=cds-YP_498845.1;Parent=gene-SAOUHSC_00250;Dbxref=Genbank:YP_498845.1,GeneID:3919270;Name=YP_498845.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498845.1;transl_table=11 -NC_007795.1 RefSeq gene 270345 271511 . - . ID=gene-SAOUHSC_00251;Dbxref=GeneID:3919271;Name=SAOUHSC_00251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00251 -NC_007795.1 RefSeq CDS 270345 271511 . - 0 ID=cds-YP_498846.1;Parent=gene-SAOUHSC_00251;Dbxref=Genbank:YP_498846.1,GeneID:3919271;Name=YP_498846.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498846.1;transl_table=11 -NC_007795.1 RefSeq gene 271579 273102 . - . ID=gene-SAOUHSC_00253;Dbxref=GeneID:3919272;Name=SAOUHSC_00253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00253 -NC_007795.1 RefSeq CDS 271579 273102 . - 0 ID=cds-YP_498847.1;Parent=gene-SAOUHSC_00253;Dbxref=Genbank:YP_498847.1,GeneID:3919272;Name=YP_498847.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498847.1;transl_table=11 -NC_007795.1 RefSeq gene 273373 274026 . + . ID=gene-SAOUHSC_00254;Dbxref=GeneID:3919196;Name=SAOUHSC_00254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00254 -NC_007795.1 RefSeq CDS 273373 274026 . + 0 ID=cds-YP_498848.1;Parent=gene-SAOUHSC_00254;Dbxref=Genbank:YP_498848.1,GeneID:3919196;Name=YP_498848.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498848.1;transl_table=11 -NC_007795.1 RefSeq gene 274060 274647 . + . ID=gene-SAOUHSC_00255;Dbxref=GeneID:3919197;Name=SAOUHSC_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00255 -NC_007795.1 RefSeq CDS 274060 274647 . + 0 ID=cds-YP_498849.1;Parent=gene-SAOUHSC_00255;Dbxref=Genbank:YP_498849.1,GeneID:3919197;Name=YP_498849.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498849.1;transl_table=11 -NC_007795.1 RefSeq gene 274790 275683 . - . ID=gene-SAOUHSC_00256;Dbxref=GeneID:3919198;Name=SAOUHSC_00256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00256 -NC_007795.1 RefSeq CDS 274790 275683 . - 0 ID=cds-YP_498850.1;Parent=gene-SAOUHSC_00256;Dbxref=Genbank:YP_498850.1,GeneID:3919198;Name=YP_498850.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498850.1;transl_table=11 -NC_007795.1 RefSeq gene 275931 276224 . + . ID=gene-SAOUHSC_00257;Dbxref=GeneID:3919199;Name=SAOUHSC_00257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00257 -NC_007795.1 RefSeq CDS 275931 276224 . + 0 ID=cds-YP_498851.1;Parent=gene-SAOUHSC_00257;Dbxref=Genbank:YP_498851.1,GeneID:3919199;Name=YP_498851.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498851.1;transl_table=11 -NC_007795.1 RefSeq gene 276308 279337 . + . ID=gene-SAOUHSC_00258;Dbxref=GeneID:3919200;Name=SAOUHSC_00258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00258 -NC_007795.1 RefSeq CDS 276308 279337 . + 0 ID=cds-YP_498852.1;Parent=gene-SAOUHSC_00258;Dbxref=Genbank:YP_498852.1,GeneID:3919200;Name=YP_498852.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498852.1;transl_table=11 -NC_007795.1 RefSeq gene 279337 279795 . + . ID=gene-SAOUHSC_00259;Dbxref=GeneID:3919201;Name=SAOUHSC_00259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00259 -NC_007795.1 RefSeq CDS 279337 279795 . + 0 ID=cds-YP_498853.1;Parent=gene-SAOUHSC_00259;Dbxref=Genbank:YP_498853.1,GeneID:3919201;Name=YP_498853.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498853.1;transl_table=11 -NC_007795.1 RefSeq gene 279728 280009 . + . ID=gene-SAOUHSC_00260;Dbxref=GeneID:3919202;Name=SAOUHSC_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00260 -NC_007795.1 RefSeq CDS 279728 280009 . + 0 ID=cds-YP_498854.1;Parent=gene-SAOUHSC_00260;Dbxref=Genbank:YP_498854.1,GeneID:3919202;Name=YP_498854.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498854.1;transl_table=11 -NC_007795.1 RefSeq gene 280022 281356 . + . ID=gene-SAOUHSC_00261;Dbxref=GeneID:3919203;Name=SAOUHSC_00261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00261 -NC_007795.1 RefSeq CDS 280022 281356 . + 0 ID=cds-YP_498855.1;Parent=gene-SAOUHSC_00261;Dbxref=Genbank:YP_498855.1,GeneID:3919203;Name=YP_498855.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498855.1;transl_table=11 -NC_007795.1 RefSeq gene 281378 285817 . + . ID=gene-SAOUHSC_00262;Dbxref=GeneID:3919204;Name=SAOUHSC_00262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00262 -NC_007795.1 RefSeq CDS 281378 285817 . + 0 ID=cds-YP_498856.1;Parent=gene-SAOUHSC_00262;Dbxref=Genbank:YP_498856.1,GeneID:3919204;Name=YP_498856.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498856.1;transl_table=11 -NC_007795.1 RefSeq gene 285847 286239 . + . ID=gene-SAOUHSC_00264;Dbxref=GeneID:3919205;Name=SAOUHSC_00264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00264 -NC_007795.1 RefSeq CDS 285847 286239 . + 0 ID=cds-YP_498857.1;Parent=gene-SAOUHSC_00264;Dbxref=Genbank:YP_498857.1,GeneID:3919205;Name=YP_498857.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498857.1;transl_table=11 -NC_007795.1 RefSeq gene 286255 286569 . + . ID=gene-SAOUHSC_00265;Dbxref=GeneID:3919206;Name=SAOUHSC_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00265 -NC_007795.1 RefSeq CDS 286255 286569 . + 0 ID=cds-YP_498858.1;Parent=gene-SAOUHSC_00265;Dbxref=Genbank:YP_498858.1,GeneID:3919206;Name=YP_498858.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498858.1;transl_table=11 -NC_007795.1 RefSeq gene 286569 287243 . + . ID=gene-SAOUHSC_00266;Dbxref=GeneID:3919207;Name=SAOUHSC_00266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00266 -NC_007795.1 RefSeq CDS 286569 287243 . + 0 ID=cds-YP_498859.1;Parent=gene-SAOUHSC_00266;Dbxref=Genbank:YP_498859.1,GeneID:3919207;Name=YP_498859.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498859.1;transl_table=11 -NC_007795.1 RefSeq gene 287243 287560 . + . ID=gene-SAOUHSC_00267;Dbxref=GeneID:3919208;Name=SAOUHSC_00267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00267 -NC_007795.1 RefSeq CDS 287243 287560 . + 0 ID=cds-YP_498860.1;Parent=gene-SAOUHSC_00267;Dbxref=Genbank:YP_498860.1,GeneID:3919208;Name=YP_498860.1;Note=conserved hypothetical protein;gbkey=CDS;product=hypothetical protein;protein_id=YP_498860.1;transl_table=11 -NC_007795.1 RefSeq gene 287570 289414 . + . ID=gene-SAOUHSC_00268;Dbxref=GeneID:3919209;Name=SAOUHSC_00268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SAOUHSC_00268 +##gff-version 3 +chr1 RefSeq gene 100 900 . + . ID=gene1;Name=example_gene;gene=example;gene_biotype=protein_coding;locus_tag=EX0001 +chr1 RefSeq CDS 100 900 . + 0 ID=cds1;Parent=gene1;product=hypothetical protein;protein_id=XP_000001;transl_table=11;locus_tag=EX0001 +chr1 RefSeq gene 1000 1500 . - . ID=gene2;Name=example2;gene_biotype=protein_coding;locus_tag=EX0002 +chr1 RefSeq CDS 1000 1500 . - 0 ID=cds2;Parent=gene2;product=another protein;protein_id=XP_000002;transl_table=11;locus_tag=EX0002
--- a/test-data/gff_to_prot-out1.txt Tue Nov 30 10:59:17 2021 +0000 +++ b/test-data/gff_to_prot-out1.txt Tue May 27 20:00:00 2025 +0000 @@ -1,247 +1,2 @@ -binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. 517 1878 + 453 - - dnaA SAOUHSC_00001 - -binds the polymerase to DNA and acts as a sliding clamp 2156 3289 + 377 - - SAOUHSC_00002 SAOUHSC_00002 - -conserved hypothetical protein 3670 3915 + 81 - - SAOUHSC_00003 SAOUHSC_00003 - -Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA 3912 5024 + 370 - - recF SAOUHSC_00004 - -DNA gyrase%2C B subunit 5034 6968 + 644 - - SAOUHSC_00005 SAOUHSC_00005 - -DNA gyrase%2C A subunit 7005 9668 + 887 - - SAOUHSC_00006 SAOUHSC_00006 - -conserved hypothetical protein 9755 10456 - 233 - - SAOUHSC_00007 SAOUHSC_00007 - -catalyzes the degradation of histidine to urocanate and ammmonia 10893 12407 + 504 - - SAOUHSC_00008 SAOUHSC_00008 - -catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA 12786 14072 + 428 - - SAOUHSC_00009 SAOUHSC_00009 - -conserved hypothetical protein 14722 15417 + 231 - - SAOUHSC_00010 SAOUHSC_00010 - -conserved hypothetical protein 15414 15743 + 109 - - SAOUHSC_00012 SAOUHSC_00012 - -conserved hypothetical protein 16106 17074 + 322 - - SAOUHSC_00013 SAOUHSC_00013 - -conserved hypothetical protein 17365 18303 + 312 - - SAOUHSC_00014 SAOUHSC_00014 - -conserved hypothetical protein 18318 20285 + 655 - - SAOUHSC_00015 SAOUHSC_00015 - -in Escherichia coli this protein is wrapped around the base of the L1 stalk 20282 20734 + 150 - - rplI SAOUHSC_00017 - -replicative DNA helicase 20766 22166 + 466 - - SAOUHSC_00018 SAOUHSC_00018 - -catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis 22444 23727 + 427 - - SAOUHSC_00019 SAOUHSC_00019 - -- 24157 24231 + 24 - - SAOUHSC_T00018 SAOUHSC_T00018 - -- 24239 24311 + 24 - - SAOUHSC_T00011 SAOUHSC_T00011 - -two-component response regulator%2C putative 24931 25632 + 233 - - SAOUHSC_00020 SAOUHSC_00020 - -sensory box histidine kinase VicK%2C putative 25645 27471 + 608 - - SAOUHSC_00021 SAOUHSC_00021 - -conserved hypothetical protein 27515 28798 + 427 - - SAOUHSC_00022 SAOUHSC_00022 - -conserved hypothetical protein 28799 29587 + 262 - - SAOUHSC_00023 SAOUHSC_00023 - -conserved hypothetical protein 29977 30777 + 266 - - SAOUHSC_00024 SAOUHSC_00024 - -conserved hypothetical protein 31005 33323 + 772 - - SAOUHSC_00025 SAOUHSC_00025 - -conserved hypothetical protein 33555 34034 - 159 - - SAOUHSC_00026 SAOUHSC_00026 - -SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA 33691 34170 + 159 - - SAOUHSC_00027 SAOUHSC_00027 - -- 34375 34509 - 44 - - SAOUHSC_00028 SAOUHSC_00028 - -conserved hypothetical protein 34473 34565 + 30 - - SAOUHSC_00029 SAOUHSC_00029 - -conserved hypothetical protein 34712 36457 + 581 - - SAOUHSC_00030 SAOUHSC_00030 - -conserved hypothetical protein 36551 37003 - 150 - - SAOUHSC_00031 SAOUHSC_00031 - -conserved hypothetical protein 37019 37120 - 33 - - SAOUHSC_00032 SAOUHSC_00032 - -conserved hypothetical protein 37218 37973 - 251 - - SAOUHSC_00033 SAOUHSC_00033 - -conserved hypothetical protein 37973 38233 - 86 - - SAOUHSC_00034 SAOUHSC_00034 - -conserved hypothetical protein 38370 39437 + 355 - - SAOUHSC_00035 SAOUHSC_00035 - -conserved hypothetical protein 39468 40802 + 444 - - SAOUHSC_00036 SAOUHSC_00036 - -conserved hypothetical protein 40821 42014 + 397 - - SAOUHSC_00037 SAOUHSC_00037 - -conserved hypothetical protein 42281 42382 - 33 - - SAOUHSC_00038 SAOUHSC_00038 - -conserved hypothetical protein 42681 43613 - 310 - - SAOUHSC_00039 SAOUHSC_00039 - -conserved hypothetical protein 43976 44179 + 67 - - SAOUHSC_00040 SAOUHSC_00040 - -conserved hypothetical protein 44228 44524 + 98 - - SAOUHSC_00041 SAOUHSC_00041 - -conserved hypothetical protein 44596 45816 - 406 - - SAOUHSC_00042 SAOUHSC_00042 - -conserved hypothetical protein 45809 46360 - 183 - - SAOUHSC_00043 SAOUHSC_00043 - -conserved hypothetical protein 46473 47333 + 286 - - SAOUHSC_00044 SAOUHSC_00044 - -conserved hypothetical protein 47689 48222 - 177 - - SAOUHSC_00045 SAOUHSC_00045 - -conserved hypothetical protein 48313 49056 + 247 - - SAOUHSC_00046 SAOUHSC_00046 - -conserved hypothetical protein 49490 50092 + 200 - - SAOUHSC_00047 SAOUHSC_00047 - -conserved hypothetical protein 50359 53511 + 1050 - - SAOUHSC_00049 SAOUHSC_00049 - -conserved hypothetical protein 53568 54050 + 160 - - SAOUHSC_00050 SAOUHSC_00050 - -1-phosphatidylinositol phosphodiesterase precursor%2C putative 54255 55241 + 328 - - SAOUHSC_00051 SAOUHSC_00051 - -conserved hypothetical protein 55462 56232 + 256 - - SAOUHSC_00052 SAOUHSC_00052 - -conserved hypothetical protein 56284 57054 + 256 - - SAOUHSC_00053 SAOUHSC_00053 - -conserved hypothetical protein 57118 57888 + 256 - - SAOUHSC_00054 SAOUHSC_00054 - -conserved hypothetical protein 57955 58722 + 255 - - SAOUHSC_00055 SAOUHSC_00055 - -conserved hypothetical protein 58855 61053 + 732 - - SAOUHSC_00056 SAOUHSC_00056 - -conserved hypothetical protein 61204 62382 + 392 - - SAOUHSC_00057 SAOUHSC_00057 - -conserved hypothetical protein 62384 63772 + 462 - - SAOUHSC_00058 SAOUHSC_00058 - -conserved hypothetical protein 64265 65926 - 553 - - SAOUHSC_00060 SAOUHSC_00060 - -in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever 66252 68027 - 591 - - SAOUHSC_00061 SAOUHSC_00061 - -conserved hypothetical protein 68201 69073 - 290 - - SAOUHSC_00062 SAOUHSC_00062 - -conserved hypothetical protein 69186 70583 + 465 - - SAOUHSC_00064 SAOUHSC_00064 - -conserved hypothetical protein 70773 71246 + 157 - - SAOUHSC_00065 SAOUHSC_00065 - -L-lactate permease 71508 73100 + 530 - - SAOUHSC_00067 SAOUHSC_00067 - -protein A 73429 74979 - 516 - - SAOUHSC_00069 SAOUHSC_00069 - -staphylococcal accessory regulator-like protein 75400 76152 - 250 - - SAOUHSC_00070 SAOUHSC_00070 - -lipoprotein%2C SirC%2C putative 76521 77435 - 304 - - SAOUHSC_00071 SAOUHSC_00071 - -lipoprotein%2C SirB%2C putative 77516 78511 - 331 - - SAOUHSC_00072 SAOUHSC_00072 - -periplasmic binding protein%2C putative 78527 79519 - 330 - - SAOUHSC_00074 SAOUHSC_00074 - -conserved hypothetical protein 79885 80730 + 281 - - SAOUHSC_00075 SAOUHSC_00075 - -ornithine cyclodeaminase%2C putative 80727 81737 + 336 - - SAOUHSC_00076 SAOUHSC_00076 - -conserved hypothetical protein 81758 83512 + 584 - - SAOUHSC_00077 SAOUHSC_00077 - -conserved hypothetical protein 83505 84761 + 418 - - SAOUHSC_00078 SAOUHSC_00078 - -conserved hypothetical protein 84751 86487 + 578 - - SAOUHSC_00079 SAOUHSC_00079 - -conserved hypothetical protein 86396 88246 + 616 - - SAOUHSC_00080 SAOUHSC_00080 - -conserved hypothetical protein 88221 88997 + 258 - - SAOUHSC_00081 SAOUHSC_00081 - -conserved hypothetical protein 88997 90199 + 400 - - SAOUHSC_00082 SAOUHSC_00082 - -conserved hypothetical protein 90203 90967 + 254 - - SAOUHSC_00083 SAOUHSC_00083 - -conserved hypothetical protein 91163 91570 + 135 - - SAOUHSC_00084 SAOUHSC_00084 - -conserved hypothetical protein 91620 92246 + 208 - - SAOUHSC_00085 SAOUHSC_00085 - -3-ketoacyl-acyl carrier protein reductase%2C putative 92458 93234 + 258 - - SAOUHSC_00086 SAOUHSC_00086 - -conserved hypothetical protein 93378 93500 + 40 - - SAOUHSC_00087 SAOUHSC_00087 - -conserved hypothetical protein 93570 94550 + 326 - - SAOUHSC_00088 SAOUHSC_00088 - -conserved hypothetical protein 94513 95205 + 230 - - SAOUHSC_00089 SAOUHSC_00089 - -conserved hypothetical protein 95415 96581 + 388 - - SAOUHSC_00090 SAOUHSC_00090 - -conserved hypothetical protein 96562 97800 + 412 - - SAOUHSC_00091 SAOUHSC_00091 - -conserved hypothetical protein 97790 99220 + 476 - - SAOUHSC_00092 SAOUHSC_00092 - -superoxide dismutase%2C putative 99488 100087 + 199 - - SAOUHSC_00093 SAOUHSC_00093 - -conserved hypothetical protein 100455 101054 + 199 - - SAOUHSC_00094 SAOUHSC_00094 - -transcriptional regulator%2C GntR family%2C putative 101370 102125 - 251 - - SAOUHSC_00096 SAOUHSC_00096 - -catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate 102361 103068 + 235 - - SAOUHSC_00097 SAOUHSC_00097 - -conserved hypothetical protein 103075 104427 + 450 - - SAOUHSC_00099 SAOUHSC_00099 - -catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate 104508 105170 + 220 - - SAOUHSC_00100 SAOUHSC_00100 - -catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose 105198 106376 + 392 - - SAOUHSC_00101 SAOUHSC_00101 - -phosphonates ABC transporter%2C permease protein CC0363%2C putative 106507 107322 - 271 - - SAOUHSC_00102 SAOUHSC_00102 - -phosphonates ABC transporter%2C permease protein CC0363%2C putative 107319 108119 - 266 - - SAOUHSC_00103 SAOUHSC_00103 - -amino acid ABC transporter%2C ATP-binding protein%2C putative 108121 108894 - 257 - - SAOUHSC_00104 SAOUHSC_00104 - -phosphonate ABC transporter%2C substrate-binding protein%2C putative 109108 110064 - 318 - - SAOUHSC_00105 SAOUHSC_00105 - -conserved hypothetical protein 110293 111837 + 514 - - SAOUHSC_00106 SAOUHSC_00106 - -conserved hypothetical protein 111888 113423 + 511 - - SAOUHSC_00107 SAOUHSC_00107 - -conserved hypothetical protein 113507 113710 + 67 - - SAOUHSC_00108 SAOUHSC_00108 - -replication initiation protein%2C putative 114083 114568 + 161 - - SAOUHSC_00109 SAOUHSC_00109 - -- 114927 115214 + 95 - - SAOUHSC_00111 SAOUHSC_00111 - -alcohol dehydrogenase%2C iron-containing%2C putative 116538 119147 + 869 - - SAOUHSC_00113 SAOUHSC_00113 - -capsular polysaccharide biosynthesis protein%2C putative 119492 120160 + 222 - - SAOUHSC_00114 SAOUHSC_00114 - -capsular polysaccharide synthesis enzyme Cap5B 120176 120862 + 228 - - SAOUHSC_00115 SAOUHSC_00115 - -capsular polysaccharide synthesis enzyme Cap8C 120865 121629 + 254 - - SAOUHSC_00116 SAOUHSC_00116 - -capsular polysaccharide biosynthesis protein Cap5D%2C putative 121649 123472 + 607 - - SAOUHSC_00117 SAOUHSC_00117 - -capsular polysaccharide biosynthesis protein Cap5E%2C putative 123462 124490 + 342 - - SAOUHSC_00118 SAOUHSC_00118 - -capsular polysaccharide synthesis enzyme Cap8F 124503 125612 + 369 - - SAOUHSC_00119 SAOUHSC_00119 - -UDP-N-acetylglucosamine 2-epimerase 125616 126740 + 374 - - SAOUHSC_00120 SAOUHSC_00120 - -capsular polysaccharide synthesis enzyme O-acetyl transferase Cap5H%2C putative 126743 127369 + 208 - - SAOUHSC_00121 SAOUHSC_00121 - -capsular polysaccharide biosynthesis protein Cap5I%2C putative 127374 128483 + 369 - - SAOUHSC_00122 SAOUHSC_00122 - -capsular polysaccharide biosynthesis protein Cap5J%2C putative 128497 129663 + 388 - - SAOUHSC_00123 SAOUHSC_00123 - -capsular polysaccharide biosynthesis protein Cap5K%2C putative 129656 130861 + 401 - - SAOUHSC_00124 SAOUHSC_00124 - -cap5L protein/glycosyltransferase%2C putative 130862 132067 + 401 - - SAOUHSC_00125 SAOUHSC_00125 - -capsular polysaccharide biosynthesis protein Cap8M 132078 132635 + 185 - - SAOUHSC_00126 SAOUHSC_00126 - -cap5N protein/UDP-glucose 4-epimerase%2C putative 132635 133522 + 295 - - SAOUHSC_00127 SAOUHSC_00127 - -cap5O protein/UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 133576 134838 + 420 - - SAOUHSC_00128 SAOUHSC_00128 - -UDP-N-acetylglucosamine 2-epimerase 134915 136060 + 381 - - SAOUHSC_00129 SAOUHSC_00129 - -iron regulated%3B catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source 136125 136451 - 108 - - SAOUHSC_00130 SAOUHSC_00130 - -conserved hypothetical protein 136458 136841 - 127 - - SAOUHSC_00131 SAOUHSC_00131 - -aldehyde dehydrogenase%2C putative 137268 138755 + 495 - - SAOUHSC_00132 SAOUHSC_00132 - -conserved hypothetical protein 139401 140360 + 319 - - SAOUHSC_00133 SAOUHSC_00133 - -conserved hypothetical protein 140422 140625 - 67 - - SAOUHSC_00134 SAOUHSC_00134 - -conserved hypothetical protein 140804 141316 + 170 - - SAOUHSC_00135 SAOUHSC_00135 - -conserved hypothetical protein 141658 142398 + 246 - - SAOUHSC_00136 SAOUHSC_00136 - -conserved hypothetical protein 142412 143386 + 324 - - SAOUHSC_00137 SAOUHSC_00137 - -conserved hypothetical protein 143383 144144 + 253 - - SAOUHSC_00138 SAOUHSC_00138 - -conserved hypothetical protein 144157 145188 + 343 - - SAOUHSC_00139 SAOUHSC_00139 - -conserved hypothetical protein 145405 145764 + 119 - - SAOUHSC_00141 SAOUHSC_00141 - -Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen%2C nitrate%2C sulphate or fumarate 145937 146962 + 341 - - SAOUHSC_00142 SAOUHSC_00142 - -conserved hypothetical protein 147348 148598 + 416 - - SAOUHSC_00143 SAOUHSC_00143 - -conserved hypothetical protein 149045 156220 + 2391 - - SAOUHSC_00144 SAOUHSC_00144 - -conserved hypothetical protein 156233 156877 + 214 - - SAOUHSC_00145 SAOUHSC_00145 - -conserved hypothetical protein 157205 157684 - 159 - - SAOUHSC_00146 SAOUHSC_00146 - -acetylglutamate kinase%2C putative 157954 158718 - 254 - - SAOUHSC_00147 SAOUHSC_00147 - -bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate 158734 159975 - 413 - - argJ SAOUHSC_00148 - -catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate 159987 161018 - 343 - - argC SAOUHSC_00149 - -ornithine aminotransferase%2C putative 161057 162241 - 394 - - SAOUHSC_00150 SAOUHSC_00150 - -branched-chain amino acid transport system II carrier protein 162494 163849 - 451 - - SAOUHSC_00151 SAOUHSC_00151 - -conserved hypothetical protein 164125 164622 - 165 - - SAOUHSC_00152 SAOUHSC_00152 - -indolepyruvate decarboxylase%2C putative 164749 166389 - 546 - - SAOUHSC_00153 SAOUHSC_00153 - -conserved hypothetical protein 166583 166684 + 33 - - SAOUHSC_00154 SAOUHSC_00154 - -PTS system%2C glucose-specific component 166663 168660 - 665 - - SAOUHSC_00155 SAOUHSC_00155 - -conserved hypothetical protein 169309 170349 + 346 - - SAOUHSC_00156 SAOUHSC_00156 - -catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway 170349 171245 + 298 - - murQ SAOUHSC_00157 - -PTS system component 171257 172711 + 484 - - SAOUHSC_00158 SAOUHSC_00158 - -conserved hypothetical protein 172714 173589 + 291 - - SAOUHSC_00160 SAOUHSC_00160 - -conserved hypothetical protein 173783 174064 - 93 - - SAOUHSC_00161 SAOUHSC_00161 - -type I site-specific deoxyribonuclease%2C HsdR family%2C putative 174277 177066 + 929 - - SAOUHSC_00162 SAOUHSC_00162 - -conserved hypothetical protein 177271 178113 + 280 - - SAOUHSC_00163 SAOUHSC_00163 - -conserved hypothetical protein 178115 179038 + 307 - - SAOUHSC_00164 SAOUHSC_00164 - -conserved hypothetical protein 179025 180137 + 370 - - SAOUHSC_00166 SAOUHSC_00166 - -peptide ABC transporter%2C ATP-binding protein%2C putative 180402 181994 - 530 - - SAOUHSC_00167 SAOUHSC_00167 - -conserved hypothetical protein 181951 183429 + 492 - - SAOUHSC_00168 SAOUHSC_00168 - -peptide ABC transporter%2C permease protein%2C putative 183435 184598 + 387 - - SAOUHSC_00169 SAOUHSC_00169 - -conserved hypothetical protein 184615 186390 + 591 - - SAOUHSC_00170 SAOUHSC_00170 - -gamma-glutamyltranspeptidase%2C putative 186428 188434 + 668 - - SAOUHSC_00171 SAOUHSC_00171 - -conserved hypothetical protein 188732 189505 - 257 - - SAOUHSC_00172 SAOUHSC_00172 - -FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds 189695 190321 - 208 - - SAOUHSC_00173 SAOUHSC_00173 - -M23/M37 peptidase domain protein 190530 191108 + 192 - - SAOUHSC_00174 SAOUHSC_00174 - -multiple sugar-binding transport ATP-binding protein%2C putative 191491 192588 + 365 - - SAOUHSC_00175 SAOUHSC_00175 - -bacterial extracellular solute-binding protein%2C putative 192601 193872 + 423 - - SAOUHSC_00176 SAOUHSC_00176 - -maltose ABC transporter%2C permease protein%2C putative 193875 195143 + 422 - - SAOUHSC_00177 SAOUHSC_00177 - -maltose ABC transporter%2C permease protein 195145 195984 + 279 - - SAOUHSC_00178 SAOUHSC_00178 - -conserved hypothetical protein 196058 197134 + 358 - - SAOUHSC_00179 SAOUHSC_00179 - -conserved hypothetical protein 197159 198199 + 346 - - SAOUHSC_00180 SAOUHSC_00180 - -conserved hypothetical protein 198254 199222 + 322 - - SAOUHSC_00181 SAOUHSC_00181 - -conserved hypothetical protein 199583 200155 - 190 - - SAOUHSC_00182 SAOUHSC_00182 - -cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate 200310 201689 + 459 - - uhpT SAOUHSC_00183 - -Response regulator receiver domain protein 202048 202806 - 252 - - SAOUHSC_00184 SAOUHSC_00184 - -conserved hypothetical protein 202799 204355 - 518 - - SAOUHSC_00185 SAOUHSC_00185 - -lipoprotein%2C putative 204352 205320 - 322 - - SAOUHSC_00186 SAOUHSC_00186 - -formate acetyltransferase 205908 208157 + 749 - - SAOUHSC_00187 SAOUHSC_00187 - -pyruvate formate-lyase 1 activating enzyme%2C putative 208180 208935 + 251 - - SAOUHSC_00188 SAOUHSC_00188 - -conserved hypothetical protein 209271 211034 + 587 - - SAOUHSC_00190 SAOUHSC_00190 - -conserved hypothetical protein 211198 211542 - 114 - - SAOUHSC_00191 SAOUHSC_00191 - -coagulase 211732 213642 + 636 - - SAOUHSC_00192 SAOUHSC_00192 - -- 213824 213931 - 35 - - SAOUHSC_00193 SAOUHSC_00193 - -acetyl-CoA acetyltransferase%2C putative 214246 215430 - 394 - - SAOUHSC_00195 SAOUHSC_00195 - -conserved hypothetical protein 215460 217721 - 753 - - SAOUHSC_00196 SAOUHSC_00196 - -conserved hypothetical protein 217907 219118 - 403 - - SAOUHSC_00197 SAOUHSC_00197 - -conserved hypothetical protein 219230 220735 - 501 - - SAOUHSC_00198 SAOUHSC_00198 - -conserved hypothetical protein 220761 222338 - 525 - - SAOUHSC_00199 SAOUHSC_00199 - -membrane protein%2C putative 222779 223921 + 380 - - SAOUHSC_00200 SAOUHSC_00200 - -conserved hypothetical protein 224235 225647 - 470 - - SAOUHSC_00201 SAOUHSC_00201 - -conserved hypothetical protein 225908 226264 - 118 - - SAOUHSC_00202 SAOUHSC_00202 - -conserved hypothetical protein 226421 226594 - 57 - - SAOUHSC_00203 SAOUHSC_00203 - -Globin domain protein 226620 227765 - 381 - - SAOUHSC_00204 SAOUHSC_00204 - -- 227920 228027 + 35 - - SAOUHSC_00205 SAOUHSC_00205 - -L-lactate dehydrogenase 228482 229291 + 269 - - SAOUHSC_00206 SAOUHSC_00206 - -- 229502 229645 + 47 - - SAOUHSC_00208 SAOUHSC_00208 - -PTS system%2C glucose-specific IIBC component%2C putative 229611 231140 - 509 - - SAOUHSC_00209 SAOUHSC_00209 - -conserved hypothetical protein 231502 232437 + 311 - - SAOUHSC_00211 SAOUHSC_00211 - -conserved hypothetical protein 232547 232645 + 32 - - SAOUHSC_00212 SAOUHSC_00212 - -conserved hypothetical protein 232776 234872 + 698 - - SAOUHSC_00213 SAOUHSC_00213 - -phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C putative 234857 235324 + 155 - - SAOUHSC_00214 SAOUHSC_00214 - -PTS system component%2C putative 235347 235625 + 92 - - SAOUHSC_00215 SAOUHSC_00215 - -PTS system component 235852 237111 + 419 - - SAOUHSC_00216 SAOUHSC_00216 - -sorbitol dehydrogenase%2C putative 237129 238184 + 351 - - SAOUHSC_00217 SAOUHSC_00217 - -conserved hypothetical protein 238186 238332 + 48 - - SAOUHSC_00218 SAOUHSC_00218 - -conserved hypothetical protein 238356 239399 + 347 - - SAOUHSC_00219 SAOUHSC_00219 - -4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers 239969 240643 + 224 - - SAOUHSC_00220 SAOUHSC_00220 - -alcohol dehydrogenase%2C zinc-containing 240636 241661 + 341 - - SAOUHSC_00221 SAOUHSC_00221 - -tagB protein%2C putative 241836 243377 + 513 - - SAOUHSC_00222 SAOUHSC_00222 - -teichoic acid biosynthesis protein F%2C putative 243805 244974 + 389 - - SAOUHSC_00223 SAOUHSC_00223 - -4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers 245250 245966 + 238 - - ispD SAOUHSC_00225 - -conserved hypothetical protein 245959 246984 + 341 - - SAOUHSC_00226 SAOUHSC_00226 - -conserved hypothetical protein 247006 248694 + 562 - - SAOUHSC_00227 SAOUHSC_00227 - -conserved hypothetical protein 248727 250451 + 574 - - SAOUHSC_00228 SAOUHSC_00228 - -involved in peptidoglycan cross-linking 250591 251265 + 224 - - SAOUHSC_00229 SAOUHSC_00229 - -two-component sensor histidine kinase%2C putative 251527 253266 + 579 - - SAOUHSC_00230 SAOUHSC_00230 - -two-component response regulator%2C putative 253269 254009 + 246 - - SAOUHSC_00231 SAOUHSC_00231 - -negatively regulates murein hydrolase activity 254122 254565 + 147 - - SAOUHSC_00232 SAOUHSC_00232 - -in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases 254558 255259 + 233 - - SAOUHSC_00233 SAOUHSC_00233 - -conserved hypothetical protein 255367 256071 - 234 - - SAOUHSC_00234 SAOUHSC_00234 - -conserved hypothetical protein 256220 257011 + 263 - - SAOUHSC_00235 SAOUHSC_00235 - -6-phospho-beta-glucosidase%2C putative 257027 258463 + 478 - - SAOUHSC_00236 SAOUHSC_00236 - -conserved hypothetical protein 258896 259657 - 253 - - SAOUHSC_00237 SAOUHSC_00237 - -- 259676 259810 + 44 - - SAOUHSC_00238 SAOUHSC_00238 - -ribokinase%2C putative 259908 260822 - 304 - - SAOUHSC_00239 SAOUHSC_00239 - -cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source 260850 261254 - 134 - - SAOUHSC_00240 SAOUHSC_00240 - -conserved hypothetical protein 261269 262150 - 293 - - SAOUHSC_00241 SAOUHSC_00241 - -conserved hypothetical protein 262382 263380 - 332 - - SAOUHSC_00242 SAOUHSC_00242 - -NADH dehydrogenase subunit%2C putative 263531 263710 + 59 - - SAOUHSC_00243 SAOUHSC_00243 - -conserved hypothetical protein 263760 264152 + 130 - - SAOUHSC_00244 SAOUHSC_00244 - -drug transporter%2C putative 264825 266201 - 458 - - SAOUHSC_00246 SAOUHSC_00246 - -conserved hypothetical protein 266435 267427 + 330 - - SAOUHSC_00247 SAOUHSC_00247 - -peptidoglycan hydrolase%2C putative 267753 268703 + 316 - - SAOUHSC_00248 SAOUHSC_00248 - -conserved hypothetical protein 268755 269414 - 219 - - SAOUHSC_00249 SAOUHSC_00249 - -conserved hypothetical protein 269428 270348 - 306 - - SAOUHSC_00250 SAOUHSC_00250 - -conserved hypothetical protein 270345 271511 - 388 - - SAOUHSC_00251 SAOUHSC_00251 - -conserved hypothetical protein 271579 273102 - 507 - - SAOUHSC_00253 SAOUHSC_00253 - -conserved hypothetical protein 273373 274026 + 217 - - SAOUHSC_00254 SAOUHSC_00254 - -conserved hypothetical protein 274060 274647 + 195 - - SAOUHSC_00255 SAOUHSC_00255 - -conserved hypothetical protein 274790 275683 - 297 - - SAOUHSC_00256 SAOUHSC_00256 - -conserved hypothetical protein 275931 276224 + 97 - - SAOUHSC_00257 SAOUHSC_00257 - -conserved hypothetical protein 276308 279337 + 1009 - - SAOUHSC_00258 SAOUHSC_00258 - -conserved hypothetical protein 279337 279795 + 152 - - SAOUHSC_00259 SAOUHSC_00259 - -conserved hypothetical protein 279728 280009 + 93 - - SAOUHSC_00260 SAOUHSC_00260 - -conserved hypothetical protein 280022 281356 + 444 - - SAOUHSC_00261 SAOUHSC_00261 - -conserved hypothetical protein 281378 285817 + 1479 - - SAOUHSC_00262 SAOUHSC_00262 - -conserved hypothetical protein 285847 286239 + 130 - - SAOUHSC_00264 SAOUHSC_00264 - -conserved hypothetical protein 286255 286569 + 104 - - SAOUHSC_00265 SAOUHSC_00265 - -conserved hypothetical protein 286569 287243 + 224 - - SAOUHSC_00266 SAOUHSC_00266 - -conserved hypothetical protein 287243 287560 + 105 - - SAOUHSC_00267 SAOUHSC_00267 - -- 287570 289414 + 614 - - SAOUHSC_00268 SAOUHSC_00268 - +hypothetical protein 100 900 + 267 - - - EX0001 - +another protein 1000 1500 - 167 - - - EX0002 -
--- a/test-data/resampling-sites1.txt Tue Nov 30 10:59:17 2021 +0000 +++ b/test-data/resampling-sites1.txt Tue May 27 20:00:00 2025 +0000 @@ -1,110 +1,111 @@ #Resampling -#Console: python /Users/delphinel/miniconda3/envs/transit_test/bin/transit resampling transit-in1-rep2_smol.wig,transit-in1-rep1_smol.wig transit-co1-rep3_smol.wig,transit-co1-rep2_smol.wig,transit-co1-rep1_smol.wig transit-in1_smol.prot resampling-sites1_smol.txt -#Control Data: b'transit-in1-rep2_smol.wig,transit-in1-rep1_smol.wig' -#Experimental Data: b'transit-co1-rep3_smol.wig,transit-co1-rep2_smol.wig,transit-co1-rep1_smol.wig' -#Annotation path: b'transit-in1_smol.prot' -#Time: 64.01395511627197 +#Console: python3 /usr/local/bin/transit resampling control_file_0.wig,control_file_1.wig,control_file_2.wig input_file_0.wig,input_file_1.wig annotation.dat transit_out.txt -iN 0.0 -iC 0.0 -n TTR -s 1000 +#Parameters: samples=1000, norm=TTR, histograms=False, adaptive=False, excludeZeros=False, pseudocounts=1.0, LOESS=False, trim_Nterm=0.0, trim_Cterm=0.0 +#Control Data: b'control_file_0.wig,control_file_1.wig,control_file_2.wig' +#Experimental Data: b'input_file_0.wig,input_file_1.wig' +#Annotation path: b'annotation.dat' +#Time: 9.306800127029419 #Orf Name Desc Sites Mean Ctrl Mean Exp log2FC Sum Ctrl Sum Exp Delta Mean p-value Adj. p-value Rv0001 dnaA chromosomal replication initiation protein 31 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 Rv0002 dnaN DNA polymerase III subunit beta 31 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0003 recF recombination protein F 35 22.6 27.7 0.30 1579.1 2907.67 5.1 0.66630 1.00000 -Rv0004 - hypothetical protein Rv0004 7 2.9 0.0 -1.97 40.8 0.00 -2.9 0.40810 1.00000 -Rv0005 gyrB DNA gyrase subunit B 42 11.3 3.6 -1.66 951.9 450.90 -7.8 0.40760 1.00000 -Rv0006 gyrA DNA gyrase subunit A 45 5.7 2.4 -1.22 511.8 330.34 -3.2 0.50960 1.00000 -Rv0007 - POSSIBLE CONSERVED MEMBRANE PROTEIN 10 16.2 53.7 1.73 323.1 1610.25 37.5 0.47710 1.00000 -Rv0008c - POSSIBLE MEMBRANE PROTEIN 4 235.5 195.4 -0.27 1884.3 2345.17 -40.1 0.74730 1.00000 -Rv0009 ppiA PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) 7 175.3 89.0 -0.98 2453.5 1869.11 -86.2 0.24570 1.00000 -Rv0010c - PROBABLE CONSERVED MEMBRANE PROTEIN 10 179.3 172.9 -0.05 3586.6 5186.87 -6.4 0.94490 1.00000 +Rv0003 recF recombination protein F 35 27.7 22.6 -0.28 2907.7 1579.07 -5.1 0.66000 1.00000 +Rv0004 - hypothetical protein Rv0004 7 0.0 2.9 1.97 0.0 40.75 2.9 0.40100 1.00000 +Rv0005 gyrB DNA gyrase subunit B 42 3.6 11.3 1.43 450.9 951.88 7.8 0.40100 1.00000 +Rv0006 gyrA DNA gyrase subunit A 45 2.4 5.7 0.96 330.3 511.83 3.2 0.51200 1.00000 +Rv0007 - POSSIBLE CONSERVED MEMBRANE PROTEIN 10 53.7 16.2 -1.67 1610.3 323.06 -37.5 0.49200 1.00000 +Rv0008c - POSSIBLE MEMBRANE PROTEIN 4 195.4 235.5 0.27 2345.2 1884.31 40.1 0.73800 1.00000 +Rv0009 ppiA PROBABLE IRON-REGULATED PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A PPIA (PPIase A) (ROTAMASE A) 7 89.0 175.3 0.97 1869.1 2453.52 86.2 0.26100 1.00000 +Rv0010c - PROBABLE CONSERVED MEMBRANE PROTEIN 10 172.9 179.3 0.05 5186.9 3586.59 6.4 0.94600 1.00000 Rv0011c - putative septation inhibitor protein 3 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0012 - PROBABLE CONSERVED MEMBRANE PROTEIN 16 247.6 104.1 -1.25 7922.3 4996.36 -143.5 0.02820 1.00000 -Rv0013 trpG para-aminobenzoate synthase component II 15 0.7 2.9 2.03 21.1 129.04 2.2 0.90500 1.00000 +Rv0012 - PROBABLE CONSERVED MEMBRANE PROTEIN 16 104.1 247.6 1.24 4996.4 7922.27 143.5 0.02800 1.00000 +Rv0013 trpG para-aminobenzoate synthase component II 15 2.9 0.7 -1.18 129.0 21.13 -2.2 0.90400 1.00000 Rv0014c pknB TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE B PKNB (PROTEIN KINASE B) (STPK B) 24 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0015c pknA TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE A PKNA (PROTEIN KINASE A) (STPK A) 16 23.6 12.4 -0.92 753.9 596.59 -11.1 0.70820 1.00000 -Rv0016c pbpA PROBABLE PENICILLIN-BINDING PROTEIN PBPA 37 19.4 12.9 -0.58 1436.0 1436.86 -6.5 0.43400 1.00000 -Rv0017c rodA PROBABLE CELL DIVISION PROTEIN RODA 27 50.3 50.0 -0.01 2718.6 4051.86 -0.3 0.98690 1.00000 -Rv0018c ppp POSSIBLE SERINE/THREONINE PHOSPHATASE PPP 25 15.5 12.4 -0.32 777.2 933.35 -3.1 0.72310 1.00000 -Rv0019c - hypothetical protein Rv0019c 13 178.0 36.5 -2.29 4628.3 1421.57 -141.6 0.00390 1.00000 -Rv0020c TB39.8 hypothetical protein Rv0020c 52 12.7 17.5 0.47 1317.9 2736.79 4.9 0.63120 1.00000 -Rv0021c - hypothetical protein Rv0021c 22 301.9 542.8 0.85 13281.7 35827.15 241.0 0.24080 1.00000 -Rv0022c whiB5 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB5 8 421.8 527.6 0.32 6749.0 12661.35 105.7 0.74770 1.00000 +Rv0015c pknA TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE A PKNA (PROTEIN KINASE A) (STPK A) 16 12.4 23.6 0.87 596.6 753.90 11.1 0.71200 1.00000 +Rv0016c pbpA PROBABLE PENICILLIN-BINDING PROTEIN PBPA 37 12.9 19.4 0.55 1436.9 1436.03 6.5 0.44600 1.00000 +Rv0017c rodA PROBABLE CELL DIVISION PROTEIN RODA 27 50.0 50.3 0.01 4051.9 2718.62 0.3 0.98600 1.00000 +Rv0018c ppp POSSIBLE SERINE/THREONINE PHOSPHATASE PPP 25 12.4 15.5 0.30 933.4 777.22 3.1 0.68900 1.00000 +Rv0019c - hypothetical protein Rv0019c 13 36.5 178.0 2.26 1421.6 4628.28 141.6 0.00300 1.00000 +Rv0020c TB39.8 hypothetical protein Rv0020c 52 17.5 12.7 -0.44 2736.8 1317.86 -4.9 0.64400 1.00000 +Rv0021c - hypothetical protein Rv0021c 22 542.8 301.9 -0.84 35827.1 13281.74 -241.0 0.23500 1.00000 +Rv0022c whiB5 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB5 8 527.6 421.8 -0.32 12661.4 6749.00 -105.7 0.75900 1.00000 Rv0023 - POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN 12 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0024 - PUTATIVE SECRETED PROTEIN P60-RELATED PROTEIN 12 225.5 222.8 -0.02 5410.9 8019.31 -2.7 0.97750 1.00000 -Rv0025 - hypothetical protein Rv0025 7 90.1 275.8 1.61 1261.4 5790.99 185.7 0.03210 1.00000 -Rv0026 - hypothetical protein Rv0026 14 154.7 166.7 0.11 4332.5 7000.58 11.9 0.83090 1.00000 -Rv0027 - hypothetical protein Rv0027 5 42.4 9.2 -2.21 423.7 137.74 -33.2 0.17520 1.00000 -Rv0028 - hypothetical protein Rv0028 5 54.5 68.7 0.33 544.9 1030.50 14.2 0.79850 1.00000 -Rv0029 - hypothetical protein Rv0029 18 163.6 682.7 2.06 5889.3 36863.16 519.1 0.23780 1.00000 -Rv0030 - hypothetical protein Rv0030 5 24.8 13.7 -0.86 247.9 205.46 -11.1 0.62930 1.00000 +Rv0024 - PUTATIVE SECRETED PROTEIN P60-RELATED PROTEIN 12 222.8 225.5 0.02 8019.3 5410.92 2.7 0.98100 1.00000 +Rv0025 - hypothetical protein Rv0025 7 275.8 90.1 -1.60 5791.0 1261.40 -185.7 0.03000 1.00000 +Rv0026 - hypothetical protein Rv0026 14 166.7 154.7 -0.11 7000.6 4332.46 -11.9 0.85900 1.00000 +Rv0027 - hypothetical protein Rv0027 5 9.2 42.4 2.09 137.7 423.67 33.2 0.17300 1.00000 +Rv0028 - hypothetical protein Rv0028 5 68.7 54.5 -0.33 1030.5 544.86 -14.2 0.78600 1.00000 +Rv0029 - hypothetical protein Rv0029 18 682.7 163.6 -2.05 36863.2 5889.34 -519.1 0.22500 1.00000 +Rv0030 - hypothetical protein Rv0030 5 13.7 24.8 0.81 205.5 247.86 11.1 0.61900 1.00000 Rv0031 - POSSIBLE REMNANT OF A TRANSPOSASE 1 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0032 bioF2 POSSIBLE 8-AMINO-7-OXONONANOATE SYNTHASE BIOF2 (AONS) (8-AMINO-7-KETOPELARGONATE SYNTHASE) (7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE) (7-KAP SYNTHETASE) (L-ALANINE--PIMELYL CoA LIGASE) 57 152.1 215.1 0.50 17336.4 36778.48 63.0 0.33450 1.00000 -Rv0033 acpA PROBABLE ACYL CARRIER PROTEIN ACPA (ACP) 3 186.7 250.2 0.42 1120.3 2251.39 63.4 0.58260 1.00000 -Rv0034 - hypothetical protein Rv0034 5 189.1 283.3 0.58 1891.1 4250.17 94.2 0.46040 1.00000 -Rv0035 fadD34 PROBABLE FATTY-ACID-CoA LIGASE FADD34 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) 25 250.4 251.4 0.01 12521.7 18851.74 0.9 0.98980 1.00000 -Rv0036c - hypothetical protein Rv0036c 4 733.0 435.1 -0.75 5864.4 5221.17 -298.0 0.30590 1.00000 -Rv0037c - PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN 20 176.5 306.5 0.80 7061.9 18388.59 129.9 0.35200 1.00000 -Rv0038 - hypothetical protein Rv0038 7 293.8 416.8 0.50 4112.5 8752.08 123.0 0.49790 1.00000 -Rv0039c - POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN 4 312.6 426.7 0.45 2500.4 5120.20 114.1 0.70430 1.00000 -Rv0040c mtc28 SECRETED PROLINE RICH PROTEIN MTC28 (PROLINE RICH 28 KDA ANTIGEN) 9 46.0 130.8 1.51 827.9 3531.56 84.8 0.16480 1.00000 +Rv0032 bioF2 POSSIBLE 8-AMINO-7-OXONONANOATE SYNTHASE BIOF2 (AONS) (8-AMINO-7-KETOPELARGONATE SYNTHASE) (7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE) (7-KAP SYNTHETASE) (L-ALANINE--PIMELYL CoA LIGASE) 57 215.1 152.1 -0.50 36778.5 17336.39 -63.0 0.33100 1.00000 +Rv0033 acpA PROBABLE ACYL CARRIER PROTEIN ACPA (ACP) 3 250.2 186.7 -0.42 2251.4 1120.32 -63.4 0.60000 1.00000 +Rv0034 - hypothetical protein Rv0034 5 283.3 189.1 -0.58 4250.2 1891.15 -94.2 0.47600 1.00000 +Rv0035 fadD34 PROBABLE FATTY-ACID-CoA LIGASE FADD34 (FATTY-ACID-CoA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) 25 251.4 250.4 -0.01 18851.7 12521.72 -0.9 0.99400 1.00000 +Rv0036c - hypothetical protein Rv0036c 4 435.1 733.0 0.75 5221.2 5864.39 298.0 0.33800 1.00000 +Rv0037c - PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN 20 306.5 176.5 -0.79 18388.6 7061.90 -129.9 0.34700 1.00000 +Rv0038 - hypothetical protein Rv0038 7 416.8 293.8 -0.50 8752.1 4112.51 -123.0 0.49500 1.00000 +Rv0039c - POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN 4 426.7 312.6 -0.45 5120.2 2500.44 -114.1 0.72800 1.00000 +Rv0040c mtc28 SECRETED PROLINE RICH PROTEIN MTC28 (PROLINE RICH 28 KDA ANTIGEN) 9 130.8 46.0 -1.49 3531.6 827.95 -84.8 0.16900 1.00000 Rv0041 leuS leucyl-tRNA synthetase 72 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0042c - POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY MARR-FAMILY) 5 60.3 41.7 -0.53 603.0 625.40 -18.6 0.62690 1.00000 -Rv0043c - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY) 10 98.3 68.3 -0.52 1966.2 2050.19 -30.0 0.45820 1.00000 -Rv0044c - POSSIBLE OXIDOREDUCTASE 20 234.2 187.4 -0.32 9368.1 11246.32 -46.8 0.54380 1.00000 -Rv0045c - POSSIBLE HYDROLASE 7 309.7 278.0 -0.16 4336.3 5838.37 -31.7 0.73320 1.00000 +Rv0042c - POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY MARR-FAMILY) 5 41.7 60.3 0.52 625.4 603.01 18.6 0.64900 1.00000 +Rv0043c - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY GNTR-FAMILY) 10 68.3 98.3 0.52 2050.2 1966.16 30.0 0.47300 1.00000 +Rv0044c - POSSIBLE OXIDOREDUCTASE 20 187.4 234.2 0.32 11246.3 9368.12 46.8 0.52900 1.00000 +Rv0045c - POSSIBLE HYDROLASE 7 278.0 309.7 0.16 5838.4 4336.29 31.7 0.72700 1.00000 Rv0046c ino1 MYO-INOSITOL-1-PHOSPHATE SYNTHASE INO1 (Inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (Glucose 6-phosphate cyclase) (Glucocycloaldolase) 16 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0047c - hypothetical protein Rv0047c 7 144.9 26.6 -2.44 2029.1 559.05 -118.3 0.07060 1.00000 -Rv0048c - POSSIBLE MEMBRANE PROTEIN 16 397.0 378.2 -0.07 12704.5 18153.75 -18.8 0.85380 1.00000 -Rv0049 - hypothetical protein Rv0049 8 99.5 237.3 1.25 1591.3 5694.83 137.8 0.22340 1.00000 -Rv0050 ponA1 PROBABLE BIFUNCTIONAL PENICILLIN-BINDING PROTEIN 1A/1B PONA1 (MUREIN POLYMERASE) (PBP1): PENICILLIN-INSENSITIVE TRANSGLYCOSYLASE (PEPTIDOGLYCAN TGASE) + PENICILLIN-SENSITIVE TRANSPEPTIDASE (DD-TRANSPEPTIDASE) 37 23.9 37.3 0.64 1770.3 4144.46 13.4 0.46210 1.00000 -Rv0051 - PROBABLE CONSERVED TRANSMEMBRANE PROTEIN 34 122.5 101.2 -0.28 8331.8 10327.07 -21.3 0.65320 1.00000 -Rv0052 - hypothetical protein Rv0052 7 250.7 180.4 -0.47 3510.2 3788.37 -70.3 0.36220 1.00000 +Rv0047c - hypothetical protein Rv0047c 7 26.6 144.9 2.40 559.1 2029.07 118.3 0.09100 1.00000 +Rv0048c - POSSIBLE MEMBRANE PROTEIN 16 378.2 397.0 0.07 18153.7 12704.49 18.8 0.86000 1.00000 +Rv0049 - hypothetical protein Rv0049 8 237.3 99.5 -1.25 5694.8 1591.33 -137.8 0.22900 1.00000 +Rv0050 ponA1 PROBABLE BIFUNCTIONAL PENICILLIN-BINDING PROTEIN 1A/1B PONA1 (MUREIN POLYMERASE) (PBP1): PENICILLIN-INSENSITIVE TRANSGLYCOSYLASE (PEPTIDOGLYCAN TGASE) + PENICILLIN-SENSITIVE TRANSPEPTIDASE (DD-TRANSPEPTIDASE) 37 37.3 23.9 -0.62 4144.5 1770.34 -13.4 0.45200 1.00000 +Rv0051 - PROBABLE CONSERVED TRANSMEMBRANE PROTEIN 34 101.2 122.5 0.27 10327.1 8331.83 21.3 0.65800 1.00000 +Rv0052 - hypothetical protein Rv0052 7 180.4 250.7 0.47 3788.4 3510.24 70.3 0.35800 1.00000 Rv0053 rpsF 30S ribosomal protein S6 6 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 Rv0054 ssb single-strand DNA-binding protein 5 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0055 rpsR 30S ribosomal protein S18 4 12.0 0.0 -3.70 95.7 0.00 -12.0 0.40400 1.00000 -Rv0056 rplI 50S ribosomal protein L9 7 37.4 13.8 -1.43 523.0 290.30 -23.5 0.26930 1.00000 -Rv0057 - hypothetical protein Rv0057 15 73.0 108.1 0.57 2189.3 4865.78 35.2 0.45100 1.00000 +Rv0055 rpsR 30S ribosomal protein S18 4 0.0 12.0 3.70 0.0 95.68 12.0 0.38900 1.00000 +Rv0056 rplI 50S ribosomal protein L9 7 13.8 37.4 1.37 290.3 522.96 23.5 0.24700 1.00000 +Rv0057 - hypothetical protein Rv0057 15 108.1 73.0 -0.56 4865.8 2189.30 -35.2 0.44400 1.00000 Rv0058 dnaB replicative DNA helicase 39 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 -Rv0059 - hypothetical protein Rv0059 20 264.5 242.1 -0.13 10581.1 14527.75 -22.4 0.75390 1.00000 -Rv0060 - hypothetical protein Rv0060 23 13.1 11.0 -0.26 603.6 757.57 -2.1 0.94420 1.00000 -Rv0061 - hypothetical protein Rv0061 6 124.5 174.1 0.48 1494.5 3133.54 49.5 0.56640 1.00000 -Rv0062 celA1 POSSIBLE CELLULASE CELA1 (ENDOGLUCANASE) (ENDO-1,4-BETA-GLUCANASE) (FI-CMCASE) (CARBOXYMETHYL CELLULASE) 21 206.0 195.2 -0.08 8651.2 12294.90 -10.8 0.84180 1.00000 -Rv0063 - POSSIBLE OXIDOREDUCTASE 23 278.5 1108.1 1.99 12809.5 76460.41 829.7 0.33950 1.00000 -Rv0064 - hypothetical protein Rv0064 68 80.9 94.7 0.23 10998.2 19327.28 13.9 0.52430 1.00000 -Rv0065 - hypothetical protein Rv0065 8 93.7 171.3 0.87 1498.5 4111.50 77.7 0.51260 1.00000 -Rv0066c icd2 PROBABLE ISOCITRATE DEHYDROGENASE 38 0.3 0.0 -0.36 21.3 0.00 -0.3 0.39790 1.00000 -Rv0067c - POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY TETR-FAMILY) 12 38.2 48.4 0.34 917.1 1743.24 10.2 0.78360 1.00000 -Rv0068 - short chain dehydrogenase 12 153.3 277.6 0.86 3679.3 9993.78 124.3 0.45290 1.00000 -Rv0069c sdaA PROBABLE L-SERINE DEHYDRATASE SDAA (L-SERINE DEAMINASE) (SDH) (L-SD) 12 291.7 17205.5 5.88 7001.0 619398.51 16913.8 0.34710 1.00000 -Rv0070c glyA2 PROBABLE SERINE HYDROXYMETHYLTRANSFERASE GLYA2 (SERINE METHYLASE 2) (SHMT 2) 18 127.1 130.7 0.04 4575.9 7060.30 3.6 0.95000 1.00000 -Rv0071 - POSSIBLE MATURASE 8 489.0 620.1 0.34 7824.7 14883.37 131.1 0.68360 1.00000 -Rv0072 - PROBABLE GLUTAMINE-TRANSPORT TRANSMEMBRANE PROTEIN ABC TRANSPORTER 16 266.0 305.2 0.20 8510.7 14648.03 39.2 0.78400 1.00000 -Rv0073 - PROBABLE GLUTAMINE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER 15 353.9 283.3 -0.32 10617.9 12750.65 -70.6 0.49580 1.00000 -Rv0074 - hypothetical protein Rv0074 19 84.6 100.2 0.24 3213.3 5708.72 15.6 0.63770 1.00000 -Rv0075 - PROBABLE AMINOTRANSFERASE 24 217.5 269.9 0.31 10441.0 19432.63 52.4 0.41730 1.00000 -Rv0076c - PROBABLE MEMBRANE PROTEIN 3 176.8 289.0 0.71 1060.8 2601.13 112.2 0.66220 1.00000 -Rv0077c - PROBABLE OXIDOREDUCTASE 14 185.8 152.0 -0.29 5203.7 6383.45 -33.9 0.59930 1.00000 -Rv0078 - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN 8 19.7 11.3 -0.80 315.4 271.63 -8.4 0.59070 1.00000 -Rv0078A - hypothetical protein Rv0078A 10 183.9 117.9 -0.64 3677.3 3537.63 -65.9 0.28830 1.00000 -Rv0079 - hypothetical protein Rv0079 14 376.2 408.8 0.12 10534.3 17171.12 32.6 0.84060 1.00000 -Rv0080 - hypothetical protein Rv0080 4 454.5 600.3 0.40 3635.9 7203.03 145.8 0.75160 1.00000 -Rv0081 - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN 5 374.7 346.7 -0.11 3747.1 5200.16 -28.0 0.84060 1.00000 -Rv0082 - PROBABLE OXIDOREDUCTASE 7 180.7 159.4 -0.18 2530.2 3347.28 -21.3 0.79810 1.00000 -Rv0083 - PROBABLE OXIDOREDUCTASE 23 202.6 144.4 -0.49 9320.3 9966.24 -58.2 0.19480 1.00000 -Rv0084 hycD POSSIBLE FORMATE HYDROGENLYASE HYCD (FHL) 9 183.6 107.6 -0.77 3304.0 2905.84 -75.9 0.22580 1.00000 -Rv0085 hycP POSSIBLE HYDROGENASE HYCP 4 73.7 73.2 -0.01 589.7 877.93 -0.6 0.99610 1.00000 -Rv0086 hycQ POSSIBLE HYDROGENASE HYCQ 15 33.6 46.9 0.48 1007.7 2112.52 13.4 0.57200 1.00000 -Rv0087 hycE POSSIBLE FORMATE HYDROGENASE HYCE (FHL) 25 35.9 25.0 -0.53 1796.3 1871.83 -11.0 0.62360 1.00000 -Rv0088 - hypothetical protein Rv0088 14 33.9 54.7 0.69 949.0 2297.30 20.8 0.50670 1.00000 -Rv0089 - POSSIBLE METHYLTRANSFERASE/METHYLASE 10 111.8 134.6 0.27 2235.3 4037.95 22.8 0.74620 1.00000 -Rv0090 - POSSIBLE MEMBRANE PROTEIN 12 141.2 129.1 -0.13 3389.3 4648.10 -12.1 0.82580 1.00000 -Rv0091 mtn PROBABLE BIFUNCTIONAL MTA/SAH NUCLEOSIDASE MTN: 5'-METHYLTHIOADENOSINE NUCLEOSIDASE (METHYLTHIOADENOSINE METHYLTHIORIBOHYDROLASE) + S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE (S-ADENOSYL-L-HOMOCYSTEINE HOMOCYSTEINYLRIBOHYDROLASE) 11 372.5 269.6 -0.47 8195.5 8897.25 -102.9 0.45060 1.00000 -Rv0092 ctpA PROBABLE CATION TRANSPORTER P-TYPE ATPASE A CTPA 30 171.9 97.1 -0.82 10315.5 8736.65 -74.9 0.02900 1.00000 -Rv0093c - PROBABLE CONSERVED MEMBRANE PROTEIN 8 78.5 76.1 -0.05 1256.7 1825.51 -2.5 0.96640 1.00000 -Rv0094c - hypothetical protein Rv0094c 14 120.7 129.1 0.10 3379.2 5422.45 8.4 0.78210 1.00000 -Rv0095c - hypothetical protein Rv0095c 9 80.6 78.1 -0.05 1450.5 2107.86 -2.5 0.96600 1.00000 -Rv0096 PPE1 PPE FAMILY PROTEIN 34 185.2 203.8 0.14 12590.4 20782.86 18.6 0.78200 1.00000 -Rv0097 - POSSIBLE OXIDOREDUCTASE 26 162.2 96.4 -0.75 8433.6 7517.52 -65.8 0.23270 1.00000 -Rv0098 - hypothetical protein Rv0098 11 40.3 80.2 0.99 886.4 2646.90 39.9 0.31780 1.00000 -Rv0099 fadD10 acyl-CoA synthetase 26 33.2 44.7 0.43 1727.1 3488.09 11.5 0.57190 1.00000 +Rv0059 - hypothetical protein Rv0059 20 242.1 264.5 0.13 14527.7 10581.11 22.4 0.77400 1.00000 +Rv0060 - hypothetical protein Rv0060 23 11.0 13.1 0.24 757.6 603.64 2.1 0.94000 1.00000 +Rv0061 - hypothetical protein Rv0061 6 174.1 124.5 -0.48 3133.5 1494.48 -49.5 0.55000 1.00000 +Rv0062 celA1 POSSIBLE CELLULASE CELA1 (ENDOGLUCANASE) (ENDO-1,4-BETA-GLUCANASE) (FI-CMCASE) (CARBOXYMETHYL CELLULASE) 21 195.2 206.0 0.08 12294.9 8651.18 10.8 0.84900 1.00000 +Rv0063 - POSSIBLE OXIDOREDUCTASE 23 1108.1 278.5 -1.99 76460.4 12809.46 -829.7 0.34300 1.00000 +Rv0064 - hypothetical protein Rv0064 68 94.7 80.9 -0.23 19327.3 10998.15 -13.9 0.55000 1.00000 +Rv0065 - hypothetical protein Rv0065 8 171.3 93.7 -0.86 4111.5 1498.47 -77.7 0.54100 1.00000 +Rv0066c icd2 PROBABLE ISOCITRATE DEHYDROGENASE 38 0.0 0.3 0.36 0.0 21.26 0.3 0.40500 1.00000 +Rv0067c - POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY TETR-FAMILY) 12 48.4 38.2 -0.33 1743.2 917.12 -10.2 0.76100 1.00000 +Rv0068 - short chain dehydrogenase 12 277.6 153.3 -0.85 9993.8 3679.26 -124.3 0.43500 1.00000 +Rv0069c sdaA PROBABLE L-SERINE DEHYDRATASE SDAA (L-SERINE DEAMINASE) (SDH) (L-SD) 12 17205.5 291.7 -5.88 619398.5 7001.04 -16913.8 0.33400 1.00000 +Rv0070c glyA2 PROBABLE SERINE HYDROXYMETHYLTRANSFERASE GLYA2 (SERINE METHYLASE 2) (SHMT 2) 18 130.7 127.1 -0.04 7060.3 4575.85 -3.6 0.94400 1.00000 +Rv0071 - POSSIBLE MATURASE 8 620.1 489.0 -0.34 14883.4 7824.71 -131.1 0.71900 1.00000 +Rv0072 - PROBABLE GLUTAMINE-TRANSPORT TRANSMEMBRANE PROTEIN ABC TRANSPORTER 16 305.2 266.0 -0.20 14648.0 8510.71 -39.2 0.81300 1.00000 +Rv0073 - PROBABLE GLUTAMINE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER 15 283.3 353.9 0.32 12750.6 10617.86 70.6 0.48100 1.00000 +Rv0074 - hypothetical protein Rv0074 19 100.2 84.6 -0.24 5708.7 3213.34 -15.6 0.65600 1.00000 +Rv0075 - PROBABLE AMINOTRANSFERASE 24 269.9 217.5 -0.31 19432.6 10440.98 -52.4 0.42600 1.00000 +Rv0076c - PROBABLE MEMBRANE PROTEIN 3 289.0 176.8 -0.71 2601.1 1060.79 -112.2 0.65600 1.00000 +Rv0077c - PROBABLE OXIDOREDUCTASE 14 152.0 185.8 0.29 6383.4 5203.69 33.9 0.57100 1.00000 +Rv0078 - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN 8 11.3 19.7 0.75 271.6 315.41 8.4 0.60800 1.00000 +Rv0078A - hypothetical protein Rv0078A 10 117.9 183.9 0.64 3537.6 3677.34 65.9 0.30100 1.00000 +Rv0079 - hypothetical protein Rv0079 14 408.8 376.2 -0.12 17171.1 10534.25 -32.6 0.85000 1.00000 +Rv0080 - hypothetical protein Rv0080 4 600.3 454.5 -0.40 7203.0 3635.90 -145.8 0.77500 1.00000 +Rv0081 - PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN 5 346.7 374.7 0.11 5200.2 3747.15 28.0 0.83500 1.00000 +Rv0082 - PROBABLE OXIDOREDUCTASE 7 159.4 180.7 0.18 3347.3 2530.16 21.3 0.81300 1.00000 +Rv0083 - PROBABLE OXIDOREDUCTASE 23 144.4 202.6 0.49 9966.2 9320.28 58.2 0.20900 1.00000 +Rv0084 hycD POSSIBLE FORMATE HYDROGENLYASE HYCD (FHL) 9 107.6 183.6 0.76 2905.8 3303.99 75.9 0.23000 1.00000 +Rv0085 hycP POSSIBLE HYDROGENASE HYCP 4 73.2 73.7 0.01 877.9 589.71 0.6 0.99700 1.00000 +Rv0086 hycQ POSSIBLE HYDROGENASE HYCQ 15 46.9 33.6 -0.47 2112.5 1007.69 -13.4 0.55000 1.00000 +Rv0087 hycE POSSIBLE FORMATE HYDROGENASE HYCE (FHL) 25 25.0 35.9 0.51 1871.8 1796.31 11.0 0.65100 1.00000 +Rv0088 - hypothetical protein Rv0088 14 54.7 33.9 -0.67 2297.3 949.04 -20.8 0.49500 1.00000 +Rv0089 - POSSIBLE METHYLTRANSFERASE/METHYLASE 10 134.6 111.8 -0.27 4037.9 2235.26 -22.8 0.74000 1.00000 +Rv0090 - POSSIBLE MEMBRANE PROTEIN 12 129.1 141.2 0.13 4648.1 3389.28 12.1 0.83800 1.00000 +Rv0091 mtn PROBABLE BIFUNCTIONAL MTA/SAH NUCLEOSIDASE MTN: 5'-METHYLTHIOADENOSINE NUCLEOSIDASE (METHYLTHIOADENOSINE METHYLTHIORIBOHYDROLASE) + S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE (S-ADENOSYL-L-HOMOCYSTEINE HOMOCYSTEINYLRIBOHYDROLASE) 11 269.6 372.5 0.46 8897.3 8195.54 102.9 0.46400 1.00000 +Rv0092 ctpA PROBABLE CATION TRANSPORTER P-TYPE ATPASE A CTPA 30 97.1 171.9 0.82 8736.7 10315.46 74.9 0.02700 1.00000 +Rv0093c - PROBABLE CONSERVED MEMBRANE PROTEIN 8 76.1 78.5 0.05 1825.5 1256.71 2.5 0.96100 1.00000 +Rv0094c - hypothetical protein Rv0094c 14 129.1 120.7 -0.10 5422.5 3379.17 -8.4 0.77900 1.00000 +Rv0095c - hypothetical protein Rv0095c 9 78.1 80.6 0.05 2107.9 1450.54 2.5 0.97200 1.00000 +Rv0096 PPE1 PPE FAMILY PROTEIN 34 203.8 185.2 -0.14 20782.9 12590.44 -18.6 0.77400 1.00000 +Rv0097 - POSSIBLE OXIDOREDUCTASE 26 96.4 162.2 0.74 7517.5 8433.61 65.8 0.20600 1.00000 +Rv0098 - hypothetical protein Rv0098 11 80.2 40.3 -0.98 2646.9 886.41 -39.9 0.31400 1.00000 +Rv0099 fadD10 acyl-CoA synthetase 26 44.7 33.2 -0.42 3488.1 1727.10 -11.5 0.58000 1.00000 Rv0100 - hypothetical protein Rv0100 0 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 Rv0101 nrp PROBABLE PEPTIDE SYNTHETASE NRP (PEPTIDE SYNTHASE) 0 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000 Rv0102 - PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN 0 0.0 0.0 0.00 0.0 0.00 0.0 1.00000 1.00000