Mercurial > repos > iuc > gffcompare
view test-data/gffcompare_out2.gtf @ 2:f99d7825a501 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit a5352fb7f073b0083b750c5cf7d283ebcc16b30d
| author | iuc |
|---|---|
| date | Tue, 05 Feb 2019 15:51:44 -0500 |
| parents | 3c97c841a443 |
| children | 2bb86e2c417f |
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chr1 StringTie transcript 160930303 160940234 . + . transcript_id "MSTRG.3.1"; gene_id "MSTRG.3"; gene_name "uc007del.2"; xloc "XLOC_000001"; cmp_ref "uc007del.2"; class_code "c"; tss_id "TSS1"; chr1 StringTie exon 160930303 160930344 . + . transcript_id "MSTRG.3.1"; gene_id "MSTRG.3"; exon_number "1"; chr1 StringTie exon 160938112 160938232 . + . transcript_id "MSTRG.3.1"; gene_id "MSTRG.3"; exon_number "2"; chr1 StringTie exon 160939995 160940234 . + . transcript_id "MSTRG.3.1"; gene_id "MSTRG.3"; exon_number "3"; chr1 StringTie transcript 160940817 160967997 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; gene_name "uc007del.2"; xloc "XLOC_000001"; cmp_ref "uc007del.2"; class_code "c"; tss_id "TSS2"; chr1 StringTie exon 160940817 160940994 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "1"; chr1 StringTie exon 160942528 160942728 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "2"; chr1 StringTie exon 160946534 160946666 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "3"; chr1 StringTie exon 160948307 160948425 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "4"; chr1 StringTie exon 160950222 160950334 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "5"; chr1 StringTie exon 160950841 160951122 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "6"; chr1 StringTie exon 160951615 160951829 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "7"; chr1 StringTie exon 160954784 160955151 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "8"; chr1 StringTie exon 160955815 160955979 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "9"; chr1 StringTie exon 160959401 160959553 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "10"; chr1 StringTie exon 160962271 160962484 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "11"; chr1 StringTie exon 160963479 160963569 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "12"; chr1 StringTie exon 160963708 160963840 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "13"; chr1 StringTie exon 160964950 160965120 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "14"; chr1 StringTie exon 160965673 160965788 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "15"; chr1 StringTie exon 160967647 160967997 . + . transcript_id "MSTRG.4.1"; gene_id "MSTRG.4"; exon_number "16"; chr1 StringTie transcript 160968644 160972020 . + . transcript_id "MSTRG.5.1"; gene_id "MSTRG.5"; gene_name "uc007del.2"; xloc "XLOC_000001"; cmp_ref "uc007del.2"; class_code "c"; tss_id "TSS3"; chr1 StringTie exon 160968644 160972020 . + . transcript_id "MSTRG.5.1"; gene_id "MSTRG.5"; exon_number "1"; chr1 StringTie transcript 160972938 160974977 . + . transcript_id "MSTRG.6.1"; gene_id "MSTRG.6"; gene_name "uc007del.2"; xloc "XLOC_000001"; cmp_ref "uc007del.2"; class_code "c"; tss_id "TSS4"; chr1 StringTie exon 160972938 160974977 . + . transcript_id "MSTRG.6.1"; gene_id "MSTRG.6"; exon_number "1"; chr1 StringTie transcript 161003085 161003516 . + . transcript_id "MSTRG.7.1"; gene_id "MSTRG.7"; xloc "XLOC_000002"; class_code "u"; tss_id "TSS5"; chr1 StringTie exon 161003085 161003516 . + . transcript_id "MSTRG.7.1"; gene_id "MSTRG.7"; exon_number "1"; chr1 StringTie transcript 161006151 161006466 . + . transcript_id "MSTRG.10.1"; gene_id "MSTRG.10"; xloc "XLOC_000003"; class_code "u"; tss_id "TSS6"; chr1 StringTie exon 161006151 161006466 . + . transcript_id "MSTRG.10.1"; gene_id "MSTRG.10"; exon_number "1"; chr1 StringTie transcript 161008375 161008625 . + . transcript_id "MSTRG.12.1"; gene_id "MSTRG.12"; xloc "XLOC_000004"; class_code "u"; tss_id "TSS7"; chr1 StringTie exon 161008375 161008625 . + . transcript_id "MSTRG.12.1"; gene_id "MSTRG.12"; exon_number "1"; chr1 StringTie transcript 161009768 161010195 . + . transcript_id "MSTRG.13.1"; gene_id "MSTRG.13"; xloc "XLOC_000005"; class_code "u"; tss_id "TSS8"; chr1 StringTie exon 161009768 161010195 . + . transcript_id "MSTRG.13.1"; gene_id "MSTRG.13"; exon_number "1"; chr1 StringTie transcript 161019713 161019962 . + . transcript_id "MSTRG.14.1"; gene_id "MSTRG.14"; gene_name "uc007der.1"; xloc "XLOC_000006"; cmp_ref "uc007der.1"; class_code "x"; tss_id "TSS9"; chr1 StringTie exon 161019713 161019962 . + . transcript_id "MSTRG.14.1"; gene_id "MSTRG.14"; exon_number "1"; chr1 StringTie transcript 161034351 161038539 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; gene_name "uc007dev.1"; xloc "XLOC_000007"; cmp_ref "uc007dev.1"; class_code "j"; tss_id "TSS10"; chr1 StringTie exon 161034351 161034719 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "1"; chr1 StringTie exon 161035752 161035804 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "2"; chr1 StringTie exon 161035983 161036014 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "3"; chr1 StringTie exon 161036208 161036244 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "4"; chr1 StringTie exon 161036549 161036579 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "5"; chr1 StringTie exon 161036820 161036852 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "6"; chr1 StringTie exon 161037288 161037315 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "7"; chr1 StringTie exon 161037505 161037547 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "8"; chr1 StringTie exon 161037995 161038037 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "9"; chr1 StringTie exon 161038225 161038272 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "10"; chr1 StringTie exon 161038457 161038539 . + . transcript_id "MSTRG.16.1"; gene_id "MSTRG.16"; exon_number "11"; chr1 StringTie transcript 161034584 161038539 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; gene_name "uc007dev.1"; xloc "XLOC_000007"; cmp_ref "uc007dev.1"; class_code "j"; tss_id "TSS11"; chr1 StringTie exon 161034584 161034719 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "1"; chr1 StringTie exon 161035752 161035804 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "2"; chr1 StringTie exon 161035983 161036014 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "3"; chr1 StringTie exon 161036208 161036244 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "4"; chr1 StringTie exon 161036549 161036579 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "5"; chr1 StringTie exon 161036820 161036852 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "6"; chr1 StringTie exon 161037124 161037164 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "7"; chr1 StringTie exon 161037288 161037315 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "8"; chr1 StringTie exon 161037505 161037547 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "9"; chr1 StringTie exon 161037995 161038037 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "10"; chr1 StringTie exon 161038225 161038272 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "11"; chr1 StringTie exon 161038457 161038539 . + . transcript_id "MSTRG.16.2"; gene_id "MSTRG.16"; exon_number "12"; chr1 StringTie transcript 161034642 161038338 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; gene_name "uc007dev.1"; xloc "XLOC_000007"; cmp_ref "uc007dev.1"; class_code "j"; tss_id "TSS11"; chr1 StringTie exon 161034642 161035194 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "1"; chr1 StringTie exon 161035752 161035804 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "2"; chr1 StringTie exon 161035983 161036014 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "3"; chr1 StringTie exon 161036208 161036244 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "4"; chr1 StringTie exon 161036549 161036579 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "5"; chr1 StringTie exon 161036820 161036852 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "6"; chr1 StringTie exon 161037124 161037164 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "7"; chr1 StringTie exon 161037288 161037315 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "8"; chr1 StringTie exon 161037505 161037547 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "9"; chr1 StringTie exon 161037995 161038037 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "10"; chr1 StringTie exon 161038225 161038338 . + . transcript_id "MSTRG.16.3"; gene_id "MSTRG.16"; exon_number "11"; chr1 StringTie transcript 161035095 161038539 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; gene_name "uc007dev.1"; xloc "XLOC_000007"; cmp_ref "uc007dev.1"; class_code "j"; tss_id "TSS12"; chr1 StringTie exon 161035095 161035194 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "1"; chr1 StringTie exon 161035752 161035804 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "2"; chr1 StringTie exon 161035983 161036014 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "3"; chr1 StringTie exon 161036208 161036244 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "4"; chr1 StringTie exon 161036549 161036579 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "5"; chr1 StringTie exon 161036820 161036852 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "6"; chr1 StringTie exon 161037288 161037315 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "7"; chr1 StringTie exon 161037505 161037547 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "8"; chr1 StringTie exon 161037995 161038037 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "9"; chr1 StringTie exon 161038225 161038272 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "10"; chr1 StringTie exon 161038457 161038539 . + . transcript_id "MSTRG.16.4"; gene_id "MSTRG.16"; exon_number "11"; chr1 StringTie transcript 161035164 161038539 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; gene_name "uc007dev.1"; xloc "XLOC_000007"; cmp_ref "uc007dev.1"; class_code "="; tss_id "TSS12"; chr1 StringTie exon 161035164 161035194 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "1"; chr1 StringTie exon 161035752 161035804 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "2"; chr1 StringTie exon 161035983 161036014 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "3"; chr1 StringTie exon 161036208 161036579 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "4"; chr1 StringTie exon 161036820 161036852 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "5"; chr1 StringTie exon 161037124 161037164 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "6"; chr1 StringTie exon 161037288 161037315 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "7"; chr1 StringTie exon 161037505 161037547 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "8"; chr1 StringTie exon 161037995 161038037 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "9"; chr1 StringTie exon 161038225 161038272 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "10"; chr1 StringTie exon 161038457 161038539 . + . transcript_id "MSTRG.16.5"; gene_id "MSTRG.16"; exon_number "11"; chr1 StringTie transcript 161041562 161070639 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; gene_name "uc007dey.2"; xloc "XLOC_000008"; cmp_ref "uc007dey.2"; class_code "s"; tss_id "TSS13"; chr1 StringTie exon 161041562 161041930 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "1"; chr1 StringTie exon 161043613 161043688 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "2"; chr1 StringTie exon 161044959 161045069 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "3"; chr1 StringTie exon 161045258 161045476 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "4"; chr1 StringTie exon 161046777 161046929 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "5"; chr1 StringTie exon 161049938 161050000 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "6"; chr1 StringTie exon 161051331 161051438 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "7"; chr1 StringTie exon 161056461 161056530 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "8"; chr1 StringTie exon 161057447 161057553 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "9"; chr1 StringTie exon 161060045 161060091 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "10"; chr1 StringTie exon 161060736 161060859 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "11"; chr1 StringTie exon 161062782 161062877 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "12"; chr1 StringTie exon 161063247 161063348 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "13"; chr1 StringTie exon 161065225 161065291 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "14"; chr1 StringTie exon 161069080 161069179 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "15"; chr1 StringTie exon 161069993 161070639 . + . transcript_id "MSTRG.18.1"; gene_id "MSTRG.18"; exon_number "16"; chr1 StringTie transcript 161045151 161056533 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; gene_name "uc007dey.2"; xloc "XLOC_000008"; cmp_ref "uc007dey.2"; class_code "s"; tss_id "TSS14"; chr1 StringTie exon 161045151 161045476 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "1"; chr1 StringTie exon 161046777 161046929 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "2"; chr1 StringTie exon 161049938 161050000 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "3"; chr1 StringTie exon 161051331 161051438 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "4"; chr1 StringTie exon 161053941 161054120 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "5"; chr1 StringTie exon 161056461 161056533 . + . transcript_id "MSTRG.18.2"; gene_id "MSTRG.18"; exon_number "6"; chr1 StringTie transcript 161070945 161078458 . + . transcript_id "MSTRG.20.1"; gene_id "MSTRG.20"; gene_name "uc007dfd.3"; xloc "XLOC_000009"; cmp_ref "uc007dfd.3"; class_code "c"; tss_id "TSS15"; chr1 StringTie exon 161070945 161071356 . + . transcript_id "MSTRG.20.1"; gene_id "MSTRG.20"; exon_number "1"; chr1 StringTie exon 161074757 161074930 . + . transcript_id "MSTRG.20.1"; gene_id "MSTRG.20"; exon_number "2"; chr1 StringTie exon 161078329 161078458 . + . transcript_id "MSTRG.20.1"; gene_id "MSTRG.20"; exon_number "3"; chr1 StringTie transcript 161082956 161083421 . + . transcript_id "MSTRG.21.1"; gene_id "MSTRG.21"; gene_name "uc007dfe.4"; xloc "XLOC_000009"; cmp_ref "uc007dfe.4"; class_code "c"; tss_id "TSS16"; chr1 StringTie exon 161082956 161083421 . + . transcript_id "MSTRG.21.1"; gene_id "MSTRG.21"; exon_number "1"; chr1 StringTie transcript 161084121 161084344 . + . transcript_id "MSTRG.22.1"; gene_id "MSTRG.22"; gene_name "uc007dfe.4"; xloc "XLOC_000009"; cmp_ref "uc007dfe.4"; class_code "c"; tss_id "TSS17"; chr1 StringTie exon 161084121 161084344 . + . transcript_id "MSTRG.22.1"; gene_id "MSTRG.22"; exon_number "1"; chr1 StringTie transcript 161085014 161086329 . + . transcript_id "MSTRG.23.1"; gene_id "MSTRG.23"; gene_name "uc056yep.1"; xloc "XLOC_000009"; cmp_ref "uc056yep.1"; class_code "c"; tss_id "TSS18"; chr1 StringTie exon 161085014 161086329 . + . transcript_id "MSTRG.23.1"; gene_id "MSTRG.23"; exon_number "1"; chr1 StringTie transcript 161088497 161088913 . + . transcript_id "MSTRG.24.1"; gene_id "MSTRG.24"; gene_name "uc007dff.1"; xloc "XLOC_000010"; cmp_ref "uc007dff.1"; class_code "x"; tss_id "TSS19"; chr1 StringTie exon 161088497 161088913 . + . transcript_id "MSTRG.24.1"; gene_id "MSTRG.24"; exon_number "1"; chr1 StringTie transcript 161089415 161131512 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; gene_name "uc007dff.1"; xloc "XLOC_000011"; cmp_ref "uc007dff.1"; class_code "s"; tss_id "TSS20"; chr1 StringTie exon 161089415 161090511 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "1"; chr1 StringTie exon 161093681 161093787 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "2"; chr1 StringTie exon 161095529 161095737 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "3"; chr1 StringTie exon 161098263 161098396 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "4"; chr1 StringTie exon 161099142 161099285 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "5"; chr1 StringTie exon 161101451 161101634 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "6"; chr1 StringTie exon 161102979 161103094 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "7"; chr1 StringTie exon 161105401 161105495 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "8"; chr1 StringTie exon 161106707 161106865 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "9"; chr1 StringTie exon 161109222 161109795 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "10"; chr1 StringTie exon 161130389 161130452 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "11"; chr1 StringTie exon 161131363 161131512 . + . transcript_id "MSTRG.26.1"; gene_id "MSTRG.26"; exon_number "12"; chr1 StringTie transcript 161123665 161123877 . + . transcript_id "MSTRG.28.1"; gene_id "MSTRG.28"; gene_name "uc007dff.1"; xloc "XLOC_000012"; cmp_ref "uc007dff.1"; class_code "i"; tss_id "TSS21"; chr1 StringTie exon 161123665 161123877 . + . transcript_id "MSTRG.28.1"; gene_id "MSTRG.28"; exon_number "1"; chr1 StringTie transcript 29485012 29485458 . - . transcript_id "MSTRG.1.1"; gene_id "MSTRG.1"; xloc "XLOC_000013"; class_code "u"; tss_id "TSS22"; chr1 StringTie exon 29485012 29485458 . - . transcript_id "MSTRG.1.1"; gene_id "MSTRG.1"; exon_number "1"; chr1 StringTie transcript 86909344 86909692 . - . transcript_id "MSTRG.2.1"; gene_id "MSTRG.2"; xloc "XLOC_000014"; class_code "u"; tss_id "TSS23"; chr1 StringTie exon 86909344 86909692 . - . transcript_id "MSTRG.2.1"; gene_id "MSTRG.2"; exon_number "1"; chr1 StringTie transcript 161003658 161004769 . - . transcript_id "MSTRG.8.1"; gene_id "MSTRG.8"; xloc "XLOC_000015"; class_code "u"; tss_id "TSS24"; chr1 StringTie exon 161003658 161004769 . - . transcript_id "MSTRG.8.1"; gene_id "MSTRG.8"; exon_number "1"; chr1 StringTie transcript 161005030 161005802 . - . transcript_id "MSTRG.9.1"; gene_id "MSTRG.9"; xloc "XLOC_000016"; class_code "u"; tss_id "TSS25"; chr1 StringTie exon 161005030 161005802 . - . transcript_id "MSTRG.9.1"; gene_id "MSTRG.9"; exon_number "1"; chr1 StringTie transcript 161007444 161007700 . - . transcript_id "MSTRG.11.1"; gene_id "MSTRG.11"; xloc "XLOC_000017"; class_code "u"; tss_id "TSS26"; chr1 StringTie exon 161007444 161007700 . - . transcript_id "MSTRG.11.1"; gene_id "MSTRG.11"; exon_number "1"; chr1 StringTie transcript 161032044 161032396 . - . transcript_id "MSTRG.15.1"; gene_id "MSTRG.15"; gene_name "uc007des.1"; xloc "XLOC_000018"; cmp_ref "uc007des.1"; class_code "c"; tss_id "TSS27"; chr1 StringTie exon 161032044 161032396 . - . transcript_id "MSTRG.15.1"; gene_id "MSTRG.15"; exon_number "1"; chr1 StringTie transcript 161041525 161050001 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; gene_name "uc007dey.2"; xloc "XLOC_000019"; cmp_ref "uc007dey.2"; class_code "c"; tss_id "TSS28"; chr1 StringTie exon 161041525 161041930 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "1"; chr1 StringTie exon 161043613 161043688 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "2"; chr1 StringTie exon 161044959 161045069 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "3"; chr1 StringTie exon 161045258 161045476 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "4"; chr1 StringTie exon 161046777 161046929 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "5"; chr1 StringTie exon 161049938 161050001 . - . transcript_id "MSTRG.17.1"; gene_id "MSTRG.17"; exon_number "6"; chr1 StringTie transcript 161051330 161070504 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; gene_name "uc007dey.2"; xloc "XLOC_000019"; cmp_ref "uc007dey.2"; class_code "c"; tss_id "TSS29"; chr1 StringTie exon 161051330 161051438 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "1"; chr1 StringTie exon 161053941 161054120 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "2"; chr1 StringTie exon 161056461 161056530 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "3"; chr1 StringTie exon 161057447 161057553 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "4"; chr1 StringTie exon 161060045 161060091 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "5"; chr1 StringTie exon 161060736 161060859 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "6"; chr1 StringTie exon 161062782 161062877 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "7"; chr1 StringTie exon 161063247 161063348 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "8"; chr1 StringTie exon 161065225 161065291 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "9"; chr1 StringTie exon 161069080 161069179 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "10"; chr1 StringTie exon 161069993 161070504 . - . transcript_id "MSTRG.19.1"; gene_id "MSTRG.19"; exon_number "11"; chr1 StringTie transcript 161051331 161070649 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; gene_name "uc007dey.2"; xloc "XLOC_000019"; cmp_ref "uc007dey.2"; class_code "j"; tss_id "TSS30"; chr1 StringTie exon 161051331 161051438 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "1"; chr1 StringTie exon 161056461 161056530 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "2"; chr1 StringTie exon 161057447 161057553 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "3"; chr1 StringTie exon 161060045 161060091 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "4"; chr1 StringTie exon 161060736 161060859 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "5"; chr1 StringTie exon 161062782 161062877 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "6"; chr1 StringTie exon 161063247 161063348 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "7"; chr1 StringTie exon 161065225 161065291 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "8"; chr1 StringTie exon 161069080 161069179 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "9"; chr1 StringTie exon 161069993 161070649 . - . transcript_id "MSTRG.19.2"; gene_id "MSTRG.19"; exon_number "10"; chr1 StringTie transcript 161088915 161090275 . - . transcript_id "MSTRG.25.1"; gene_id "MSTRG.25"; gene_name "uc007dff.1"; xloc "XLOC_000020"; cmp_ref "uc007dff.1"; class_code "c"; tss_id "TSS31"; chr1 StringTie exon 161088915 161090275 . - . transcript_id "MSTRG.25.1"; gene_id "MSTRG.25"; exon_number "1"; chr1 StringTie transcript 161090412 161131492 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; gene_name "uc007dff.1"; xloc "XLOC_000020"; cmp_ref "uc007dff.1"; class_code "="; tss_id "TSS32"; chr1 StringTie exon 161090412 161090511 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "1"; chr1 StringTie exon 161093681 161093787 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "2"; chr1 StringTie exon 161095529 161095737 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "3"; chr1 StringTie exon 161098263 161098396 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "4"; chr1 StringTie exon 161099142 161099285 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "5"; chr1 StringTie exon 161101451 161101634 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "6"; chr1 StringTie exon 161102979 161103094 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "7"; chr1 StringTie exon 161105401 161105495 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "8"; chr1 StringTie exon 161106707 161106865 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "9"; chr1 StringTie exon 161109222 161109795 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "10"; chr1 StringTie exon 161130389 161130452 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "11"; chr1 StringTie exon 161131363 161131492 . - . transcript_id "MSTRG.27.1"; gene_id "MSTRG.27"; exon_number "12"; chr1 StringTie transcript 192074156 192074378 . - . transcript_id "MSTRG.29.1"; gene_id "MSTRG.29"; xloc "XLOC_000021"; class_code "u"; tss_id "TSS33"; chr1 StringTie exon 192074156 192074378 . - . transcript_id "MSTRG.29.1"; gene_id "MSTRG.29"; exon_number "1";