Mercurial > repos > iuc > gffcompare
view test-data/gffcompare_out2.gtf @ 6:3c5e024a18cf draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit 8e8c67f4aa5ab37fc28c512b4e9e7f26a2d1e604
| author | iuc |
|---|---|
| date | Fri, 04 Oct 2024 08:47:42 +0000 |
| parents | f99dd58de04f |
| children |
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chr1 Cufflinks transcript 12 20 . + . transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; gene_name "CUFF.3"; oId "CUFF.3.1"; cmp_ref "CUFF.3.1"; class_code "="; tss_id "TSS1"; num_samples "1"; chr1 Cufflinks exon 12 20 . + . transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; exon_number "1"; chr1 Cufflinks transcript 32 40 . + . transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; oId "CUFF.7.1"; cmp_ref "CUFF.3.1"; class_code "p"; cmp_ref_gene "CUFF.3"; tss_id "TSS2"; num_samples "1"; chr1 Cufflinks exon 32 40 . + . transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; exon_number "1"; chr1 Cufflinks transcript 42 47 . + . transcript_id "TCONS_00000007"; gene_id "XLOC_000003"; gene_name "CUFF.7"; oId "CUFF.7.1"; contained_in "TCONS_00000002"; cmp_ref "CUFF.7.1"; class_code "="; tss_id "TSS3"; num_samples "1"; chr1 Cufflinks exon 42 47 . + . transcript_id "TCONS_00000007"; gene_id "XLOC_000003"; exon_number "1"; chr1 Cufflinks transcript 42 50 . + . transcript_id "TCONS_00000002"; gene_id "XLOC_000003"; gene_name "CUFF.7"; oId "CUFF.9.1"; cmp_ref "CUFF.7.1"; class_code "k"; tss_id "TSS3"; num_samples "1"; chr1 Cufflinks exon 42 50 . + . transcript_id "TCONS_00000002"; gene_id "XLOC_000003"; exon_number "1"; chr1 Cufflinks transcript 52 60 . + . transcript_id "TCONS_00000003"; gene_id "XLOC_000004"; oId "CUFF.10.1"; cmp_ref "CUFF.7.1"; class_code "p"; cmp_ref_gene "CUFF.7"; tss_id "TSS4"; num_samples "1"; chr1 Cufflinks exon 52 60 . + . transcript_id "TCONS_00000003"; gene_id "XLOC_000004"; exon_number "1"; chr1 Cufflinks transcript 2 10 . - . transcript_id "TCONS_00000004"; gene_id "XLOC_000005"; gene_name "CUFF.1"; oId "CUFF.1.1"; cmp_ref "CUFF.1.1"; class_code "="; tss_id "TSS5"; num_samples "2"; chr1 Cufflinks exon 2 10 . - . transcript_id "TCONS_00000004"; gene_id "XLOC_000005"; exon_number "1"; chr1 Cufflinks transcript 15 20 . - . transcript_id "TCONS_00000005"; gene_id "XLOC_000006"; oId "CUFF.3.1"; cmp_ref "CUFF.3.1"; class_code "x"; cmp_ref_gene "CUFF.3"; tss_id "TSS6"; num_samples "1"; chr1 Cufflinks exon 15 20 . - . transcript_id "TCONS_00000005"; gene_id "XLOC_000006"; exon_number "1"; chr1 Cufflinks transcript 22 30 . - . transcript_id "TCONS_00000008"; gene_id "XLOC_000007"; gene_name "CUFF.5"; oId "CUFF.5.1"; cmp_ref "CUFF.5.1"; class_code "="; tss_id "TSS7"; num_samples "1"; chr1 Cufflinks exon 22 30 . - . transcript_id "TCONS_00000008"; gene_id "XLOC_000007"; exon_number "1";