Mercurial > repos > iuc > ggplot2_histogram
annotate utils.r @ 13:6b9816a913de draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
author | iuc |
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date | Thu, 15 May 2025 13:02:22 +0000 |
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13
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
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changeset
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1 # Function for the data input |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
2 load_data <- function(file_name, file_extension) { |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
3 if (file_extension == "csv") { |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
4 data_input <- read.csv(file_name, check.names = "false") |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
5 } else if (file_extension %in% c("tsv", "txt", "tabular")) { |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
6 data_input <- read.delim(file_name, sep = "\t", check.names = "false") |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
7 } else if (file_extension == "parquet") { |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
8 data_input <- arrow::read_parquet(file_name) |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
9 } else { |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
10 stop("Unsupported file format.") |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
11 } |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
12 return(data_input) |
6b9816a913de
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 57b86418a4f032a5664b8dc1c9585a11be629158
iuc
parents:
diff
changeset
|
13 } |