comparison ggplot_violin.xml @ 7:e44775efb2dc draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 4b44f8f834de15fd34e2fdc5e4aed282069f73af"

6:dfd5d981b5a4

<tool id="ggplot2_violin" name="Violin plot w ggplot2" version="@VERSION@+galaxy0">
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="1.4.3">r-reshape2</requirement>
        <requirement type="package" version="1.2.1">r-svglite</requirement>
    </expand>
    <command detect_errors="exit_code"><![CDATA[
cat '$script' &&
Rscript '$script'
    ]]></command>
    <configfiles>
        <configfile name="script"><![CDATA[
@R_INIT@

## Import library
library("reshape2")
library("ggplot2")

## Automatically scaled y axis or user defined
## marco not possible because on y asis relevent
#if $adv.scaling.plot_scaling == "Automatic"
    gg_scaley = NULL

7:e44775efb2dc

<tool id="ggplot2_violin" name="Violin plot w ggplot2" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01">
    <expand macro="bio_tools"/>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="1.4.4">r-reshape2</requirement>
        <requirement type="package" version="2.0.0">r-svglite</requirement>
    </expand>
    <command detect_errors="exit_code"><![CDATA[
cat '$script' &&
Rscript '$script'
    ]]></command>
    <configfiles>
        <configfile name="script"><![CDATA[
@R_INIT@

## Import library
library(reshape2)
library(ggplot2)

## Automatically scaled y axis or user defined
## marco not possible because on y asis relevent
#if $adv.scaling.plot_scaling == "Automatic"
    gg_scaley = NULL