diff goseq.xml @ 1:9d1256d9ef0b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/goseq commit 027e71072ff901d6b9593b37113c7b1f8b77527b

--- a/goseq.xml	Thu Nov 17 16:40:19 2016 -0500
+++ b/goseq.xml	Sun Jun 11 08:57:39 2017 -0400
@@ -26,7 +26,7 @@
         --wallenius_tab '$wallenius_tab'
         #end if
         #if $methods['hypergeometric']:
-        --nobias_tab 'nobias_tab'
+        --nobias_tab '$nobias_tab'
         #end if
         --repcnt '$methods.repcnt'
         --sampling_tab '$sampling_tab'
@@ -110,8 +110,7 @@
 
         *Gene category file:*
         You will also need a file describing the membership of genes in categories. The format of this file is gene_id in the first column,
-        category name in the second column. If you are interested in gene ontology categories you can use the getgo file to retrive
-        gene ontologies for model organisms, or you can construct your own file.
+        category identifier in the second column.
 
         **Method options**