Mercurial > repos > iuc > graphlan_annotate
comparison test-data/intermediary_tree @ 1:cf1df6b2220a draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2/ commit b5bd1ab6e4f3a14819dbc2bdad33006bc6131b3c"
author | iuc |
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date | Fri, 24 Jan 2020 16:25:56 -0500 |
parents | 5d6f8f0bef7c |
children |
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0:5d6f8f0bef7c | 1:cf1df6b2220a |
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44 <clade> | 44 <clade> |
45 <name>k__Bacteria</name> | 45 <name>k__Bacteria</name> |
46 <branch_length>1.0</branch_length> | 46 <branch_length>1.0</branch_length> |
47 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">200.0</property> | 47 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">200.0</property> |
48 <clade> | 48 <clade> |
49 <name>p__Actinobacteria</name> | |
50 <branch_length>1.0</branch_length> | |
51 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
52 <clade> | |
53 <name>c__Actinobacteria</name> | |
54 <branch_length>1.0</branch_length> | |
55 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
56 <clade> | |
57 <name>o__Actinomycetales</name> | |
58 <branch_length>1.0</branch_length> | |
59 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
60 <clade> | |
61 <name>f__Propionibacteriaceae</name> | |
62 <branch_length>1.0</branch_length> | |
63 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
64 <clade> | |
65 <name>g__Propionibacterium</name> | |
66 <branch_length>1.0</branch_length> | |
67 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
68 <clade> | |
69 <name>s__Propionibacterium_acnes</name> | |
70 <branch_length>1.0</branch_length> | |
71 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
72 <clade> | |
73 <name>t__Propionibacterium_acnes_unclassified</name> | |
74 <branch_length>1.0</branch_length> | |
75 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
76 </clade> | |
77 </clade> | |
78 </clade> | |
79 </clade> | |
80 </clade> | |
81 </clade> | |
82 </clade> | |
83 <clade> | |
49 <name>p__Deinococcus_Thermus</name> | 84 <name>p__Deinococcus_Thermus</name> |
50 <branch_length>1.0</branch_length> | 85 <branch_length>1.0</branch_length> |
51 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> | 86 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> |
52 <clade> | 87 <clade> |
53 <name>c__Deinococci</name> | 88 <name>c__Deinococci</name> |
64 <clade> | 99 <clade> |
65 <name>g__Deinococcus</name> | 100 <name>g__Deinococcus</name> |
66 <branch_length>1.0</branch_length> | 101 <branch_length>1.0</branch_length> |
67 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> | 102 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.298886707</property> |
68 <clade> | 103 <clade> |
104 <name>s__Deinococcus_radiodurans</name> | |
105 <branch_length>1.0</branch_length> | |
106 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property> | |
107 <clade> | |
108 <name>t__GCF_000008565</name> | |
109 <branch_length>1.0</branch_length> | |
110 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property> | |
111 </clade> | |
112 </clade> | |
113 <clade> | |
69 <name>s__Deinococcus_unclassified</name> | 114 <name>s__Deinococcus_unclassified</name> |
70 <branch_length>1.0</branch_length> | 115 <branch_length>1.0</branch_length> |
71 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1817307606</property> | 116 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1817307606</property> |
72 </clade> | |
73 <clade> | |
74 <name>s__Deinococcus_radiodurans</name> | |
75 <branch_length>1.0</branch_length> | |
76 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property> | |
77 <clade> | |
78 <name>t__GCF_000008565</name> | |
79 <branch_length>1.0</branch_length> | |
80 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">21.1340492974</property> | |
81 </clade> | |
82 </clade> | 117 </clade> |
83 </clade> | 118 </clade> |
84 </clade> | 119 </clade> |
85 </clade> | 120 </clade> |
86 </clade> | 121 </clade> |
89 <name>p__Firmicutes</name> | 124 <name>p__Firmicutes</name> |
90 <branch_length>1.0</branch_length> | 125 <branch_length>1.0</branch_length> |
91 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">183.285013514</property> | 126 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">183.285013514</property> |
92 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> | 127 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> |
93 <clade> | 128 <clade> |
94 <name>c__Clostridia</name> | |
95 <branch_length>1.0</branch_length> | |
96 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
97 <clade> | |
98 <name>o__Clostridiales</name> | |
99 <branch_length>1.0</branch_length> | |
100 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
101 <clade> | |
102 <name>f__Clostridiaceae</name> | |
103 <branch_length>1.0</branch_length> | |
104 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
105 <clade> | |
106 <name>g__Clostridium</name> | |
107 <branch_length>1.0</branch_length> | |
108 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
109 <clade> | |
110 <name>s__Clostridium_beijerinckii</name> | |
111 <branch_length>1.0</branch_length> | |
112 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
113 <clade> | |
114 <name>t__Clostridium_beijerinckii_unclassified</name> | |
115 <branch_length>1.0</branch_length> | |
116 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> | |
117 </clade> | |
118 </clade> | |
119 </clade> | |
120 </clade> | |
121 </clade> | |
122 </clade> | |
123 <clade> | |
124 <name>c__Bacilli</name> | 129 <name>c__Bacilli</name> |
125 <branch_length>1.0</branch_length> | 130 <branch_length>1.0</branch_length> |
126 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">182.398015269</property> | 131 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">182.398015269</property> |
127 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> | 132 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property> |
128 <clade> | 133 <clade> |
178 <clade> | 183 <clade> |
179 <name>g__Streptococcus</name> | 184 <name>g__Streptococcus</name> |
180 <branch_length>1.0</branch_length> | 185 <branch_length>1.0</branch_length> |
181 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">96.1062970373</property> | 186 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">96.1062970373</property> |
182 <clade> | 187 <clade> |
188 <name>s__Streptococcus_agalactiae</name> | |
189 <branch_length>1.0</branch_length> | |
190 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> | |
191 <clade> | |
192 <name>t__Streptococcus_agalactiae_unclassified</name> | |
193 <branch_length>1.0</branch_length> | |
194 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> | |
195 </clade> | |
196 </clade> | |
197 <clade> | |
183 <name>s__Streptococcus_mutans</name> | 198 <name>s__Streptococcus_mutans</name> |
184 <branch_length>1.0</branch_length> | 199 <branch_length>1.0</branch_length> |
185 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> | 200 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> |
186 <clade> | 201 <clade> |
187 <name>t__Streptococcus_mutans_unclassified</name> | 202 <name>t__Streptococcus_mutans_unclassified</name> |
188 <branch_length>1.0</branch_length> | 203 <branch_length>1.0</branch_length> |
189 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> | 204 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">93.7375603</property> |
190 </clade> | 205 </clade> |
191 </clade> | 206 </clade> |
192 <clade> | 207 </clade> |
193 <name>s__Streptococcus_agalactiae</name> | 208 </clade> |
194 <branch_length>1.0</branch_length> | 209 </clade> |
195 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> | 210 </clade> |
196 <clade> | 211 <clade> |
197 <name>t__Streptococcus_agalactiae_unclassified</name> | 212 <name>c__Clostridia</name> |
198 <branch_length>1.0</branch_length> | 213 <branch_length>1.0</branch_length> |
199 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.9449465996</property> | 214 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
200 </clade> | 215 <clade> |
201 </clade> | 216 <name>o__Clostridiales</name> |
202 </clade> | 217 <branch_length>1.0</branch_length> |
203 </clade> | 218 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
204 </clade> | 219 <clade> |
205 </clade> | 220 <name>f__Clostridiaceae</name> |
206 </clade> | 221 <branch_length>1.0</branch_length> |
207 <clade> | 222 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
208 <name>p__Actinobacteria</name> | 223 <clade> |
209 <branch_length>1.0</branch_length> | 224 <name>g__Clostridium</name> |
210 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | 225 <branch_length>1.0</branch_length> |
211 <clade> | 226 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
212 <name>c__Actinobacteria</name> | 227 <clade> |
213 <branch_length>1.0</branch_length> | 228 <name>s__Clostridium_beijerinckii</name> |
214 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | 229 <branch_length>1.0</branch_length> |
215 <clade> | 230 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
216 <name>o__Actinomycetales</name> | 231 <clade> |
217 <branch_length>1.0</branch_length> | 232 <name>t__Clostridium_beijerinckii_unclassified</name> |
218 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | 233 <branch_length>1.0</branch_length> |
219 <clade> | 234 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">26.8159954288</property> |
220 <name>f__Propionibacteriaceae</name> | |
221 <branch_length>1.0</branch_length> | |
222 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
223 <clade> | |
224 <name>g__Propionibacterium</name> | |
225 <branch_length>1.0</branch_length> | |
226 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
227 <clade> | |
228 <name>s__Propionibacterium_acnes</name> | |
229 <branch_length>1.0</branch_length> | |
230 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
231 <clade> | |
232 <name>t__Propionibacterium_acnes_unclassified</name> | |
233 <branch_length>1.0</branch_length> | |
234 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">22.66961905</property> | |
235 </clade> | 235 </clade> |
236 </clade> | 236 </clade> |
237 </clade> | 237 </clade> |
238 </clade> | 238 </clade> |
239 </clade> | 239 </clade> |
243 <name>p__Proteobacteria</name> | 243 <name>p__Proteobacteria</name> |
244 <branch_length>1.0</branch_length> | 244 <branch_length>1.0</branch_length> |
245 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">102.159086265</property> | 245 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">102.159086265</property> |
246 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#29cc36</property> | 246 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#29cc36</property> |
247 <clade> | 247 <clade> |
248 <name>c__Alphaproteobacteria</name> | |
249 <branch_length>1.0</branch_length> | |
250 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
251 <clade> | |
252 <name>o__Rhodobacterales</name> | |
253 <branch_length>1.0</branch_length> | |
254 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
255 <clade> | |
256 <name>f__Rhodobacteraceae</name> | |
257 <branch_length>1.0</branch_length> | |
258 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
259 <clade> | |
260 <name>g__Rhodobacter</name> | |
261 <branch_length>1.0</branch_length> | |
262 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
263 <clade> | |
264 <name>s__Rhodobacter_sphaeroides</name> | |
265 <branch_length>1.0</branch_length> | |
266 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
267 <clade> | |
268 <name>t__Rhodobacter_sphaeroides_unclassified</name> | |
269 <branch_length>1.0</branch_length> | |
270 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
271 </clade> | |
272 </clade> | |
273 </clade> | |
274 </clade> | |
275 </clade> | |
276 </clade> | |
277 <clade> | |
278 <name>c__Betaproteobacteria</name> | |
279 <branch_length>1.0</branch_length> | |
280 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
281 <clade> | |
282 <name>o__Neisseriales</name> | |
283 <branch_length>1.0</branch_length> | |
284 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
285 <clade> | |
286 <name>f__Neisseriaceae</name> | |
287 <branch_length>1.0</branch_length> | |
288 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
289 <clade> | |
290 <name>g__Neisseria</name> | |
291 <branch_length>1.0</branch_length> | |
292 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
293 <clade> | |
294 <name>s__Neisseria_meningitidis</name> | |
295 <branch_length>1.0</branch_length> | |
296 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
297 <clade> | |
298 <name>t__Neisseria_meningitidis_unclassified</name> | |
299 <branch_length>1.0</branch_length> | |
300 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
301 </clade> | |
302 </clade> | |
303 </clade> | |
304 </clade> | |
305 </clade> | |
306 </clade> | |
307 <clade> | |
308 <name>c__Epsilonproteobacteria</name> | |
309 <branch_length>1.0</branch_length> | |
310 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
311 <clade> | |
312 <name>o__Campylobacterales</name> | |
313 <branch_length>1.0</branch_length> | |
314 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
315 <clade> | |
316 <name>f__Helicobacteraceae</name> | |
317 <branch_length>1.0</branch_length> | |
318 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
319 <clade> | |
320 <name>g__Helicobacter</name> | |
321 <branch_length>1.0</branch_length> | |
322 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
323 <clade> | |
324 <name>s__Helicobacter_pylori</name> | |
325 <branch_length>1.0</branch_length> | |
326 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
327 <clade> | |
328 <name>t__Helicobacter_pylori_unclassified</name> | |
329 <branch_length>1.0</branch_length> | |
330 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
331 </clade> | |
332 </clade> | |
333 </clade> | |
334 </clade> | |
335 </clade> | |
336 </clade> | |
337 <clade> | |
248 <name>c__Gammaproteobacteria</name> | 338 <name>c__Gammaproteobacteria</name> |
249 <branch_length>1.0</branch_length> | 339 <branch_length>1.0</branch_length> |
250 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">85.4517057547</property> | 340 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">85.4517057547</property> |
251 <clade> | 341 <clade> |
252 <name>o__Enterobacteriales</name> | 342 <name>o__Enterobacteriales</name> |
309 <clade> | 399 <clade> |
310 <name>g__Pseudomonas</name> | 400 <name>g__Pseudomonas</name> |
311 <branch_length>1.0</branch_length> | 401 <branch_length>1.0</branch_length> |
312 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">33.3271759768</property> | 402 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">33.3271759768</property> |
313 <clade> | 403 <clade> |
404 <name>s__Pseudomonas_aeruginosa</name> | |
405 <branch_length>1.0</branch_length> | |
406 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property> | |
407 <clade> | |
408 <name>t__Pseudomonas_aeruginosa_unclassified</name> | |
409 <branch_length>1.0</branch_length> | |
410 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property> | |
411 </clade> | |
412 </clade> | |
413 <clade> | |
314 <name>s__Pseudomonas_unclassified</name> | 414 <name>s__Pseudomonas_unclassified</name> |
315 <branch_length>1.0</branch_length> | 415 <branch_length>1.0</branch_length> |
316 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">28.0078913105</property> | 416 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">28.0078913105</property> |
317 </clade> | |
318 <clade> | |
319 <name>s__Pseudomonas_aeruginosa</name> | |
320 <branch_length>1.0</branch_length> | |
321 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property> | |
322 <clade> | |
323 <name>t__Pseudomonas_aeruginosa_unclassified</name> | |
324 <branch_length>1.0</branch_length> | |
325 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">25.8720239085</property> | |
326 </clade> | |
327 </clade> | |
328 </clade> | |
329 </clade> | |
330 </clade> | |
331 </clade> | |
332 <clade> | |
333 <name>c__Alphaproteobacteria</name> | |
334 <branch_length>1.0</branch_length> | |
335 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
336 <clade> | |
337 <name>o__Rhodobacterales</name> | |
338 <branch_length>1.0</branch_length> | |
339 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
340 <clade> | |
341 <name>f__Rhodobacteraceae</name> | |
342 <branch_length>1.0</branch_length> | |
343 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
344 <clade> | |
345 <name>g__Rhodobacter</name> | |
346 <branch_length>1.0</branch_length> | |
347 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
348 <clade> | |
349 <name>s__Rhodobacter_sphaeroides</name> | |
350 <branch_length>1.0</branch_length> | |
351 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
352 <clade> | |
353 <name>t__Rhodobacter_sphaeroides_unclassified</name> | |
354 <branch_length>1.0</branch_length> | |
355 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">53.6955516997</property> | |
356 </clade> | |
357 </clade> | |
358 </clade> | |
359 </clade> | |
360 </clade> | |
361 </clade> | |
362 <clade> | |
363 <name>c__Betaproteobacteria</name> | |
364 <branch_length>1.0</branch_length> | |
365 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
366 <clade> | |
367 <name>o__Neisseriales</name> | |
368 <branch_length>1.0</branch_length> | |
369 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
370 <clade> | |
371 <name>f__Neisseriaceae</name> | |
372 <branch_length>1.0</branch_length> | |
373 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
374 <clade> | |
375 <name>g__Neisseria</name> | |
376 <branch_length>1.0</branch_length> | |
377 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
378 <clade> | |
379 <name>s__Neisseria_meningitidis</name> | |
380 <branch_length>1.0</branch_length> | |
381 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
382 <clade> | |
383 <name>t__Neisseria_meningitidis_unclassified</name> | |
384 <branch_length>1.0</branch_length> | |
385 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.3264778878</property> | |
386 </clade> | |
387 </clade> | |
388 </clade> | |
389 </clade> | |
390 </clade> | |
391 </clade> | |
392 <clade> | |
393 <name>c__Epsilonproteobacteria</name> | |
394 <branch_length>1.0</branch_length> | |
395 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
396 <clade> | |
397 <name>o__Campylobacterales</name> | |
398 <branch_length>1.0</branch_length> | |
399 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
400 <clade> | |
401 <name>f__Helicobacteraceae</name> | |
402 <branch_length>1.0</branch_length> | |
403 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
404 <clade> | |
405 <name>g__Helicobacter</name> | |
406 <branch_length>1.0</branch_length> | |
407 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
408 <clade> | |
409 <name>s__Helicobacter_pylori</name> | |
410 <branch_length>1.0</branch_length> | |
411 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
412 <clade> | |
413 <name>t__Helicobacter_pylori_unclassified</name> | |
414 <branch_length>1.0</branch_length> | |
415 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property> | |
416 </clade> | |
417 </clade> | 417 </clade> |
418 </clade> | 418 </clade> |
419 </clade> | 419 </clade> |
420 </clade> | 420 </clade> |
421 </clade> | 421 </clade> |
432 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property> | 432 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property> |
433 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property> | 433 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property> |
434 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property> | 434 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property> |
435 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property> | 435 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property> |
436 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property> | 436 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property> |
437 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_shape" ref="A:1">._._._.</property> | |
437 <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property> | 438 <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property> |
438 </phylogeny> | 439 </phylogeny> |
439 </phyloxml> | 440 </phyloxml> |