Mercurial > repos > iuc > groot
changeset 2:c15e34e39e09 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/groot commit 15ce75a21f8a3b314b0a8a420fc5b4fffe846171
| author | iuc |
|---|---|
| date | Mon, 18 Nov 2024 15:10:15 +0000 |
| parents | 5d80c24a4f0a |
| children | 4d5cf5a423d5 |
| files | groot.xml test-data/groot_database.loc |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/groot.xml Thu Nov 14 15:40:41 2024 +0000 +++ b/groot.xml Mon Nov 18 15:10:15 2024 +0000 @@ -74,7 +74,7 @@ <test expect_num_outputs="1"> <param name="fastq" value="bla-b7-150bp-5x.fq" ftype="fastq"/> <section name="index"> - <param name="groot_db_select" value="resfinder.90" /> + <param name="groot_db_select" value="resfinder.90-1.1.2-15112024" /> <param name="windowSize" value="150"/> <param name="kmerSize" value="31"/> <param name="maxK" value="20"/> @@ -104,7 +104,7 @@ <test expect_num_outputs="1"> <param name="fastq" value="argannot_light-150bp-10000-reads.fq.gz" ftype="fastq.gz"/> <section name="index"> - <param name="groot_db_select" value="arg-annot.90" /> + <param name="groot_db_select" value="arg-annot.90-1.1.2-15112024" /> <param name="windowSize" value="150"/> <param name="kmerSize" value="41"/> <param name="maxK" value="4"/>
--- a/test-data/groot_database.loc Thu Nov 14 15:40:41 2024 +0000 +++ b/test-data/groot_database.loc Mon Nov 18 15:10:15 2024 +0000 @@ -6,5 +6,5 @@ # path : final oath to bakta database on galaxy # value, name, dbkey, path # eg. -resfinder.90 resfinder (90 percent identity) ${__HERE__}/resfinder.90 1.1.2 -arg-annot.90 arg-annot (90 percent identity) ${__HERE__}/arg-annot.90 1.1.2 +resfinder.90-1.1.2-15112024 resfinder (90 percent identity) ${__HERE__}/resfinder.90 1.1.2 +arg-annot.90-1.1.2-15112024 arg-annot (90 percent identity) ${__HERE__}/arg-annot.90 1.1.2 \ No newline at end of file