Mercurial > repos > iuc > gtdbtk_classify_wf
comparison test-data/gtdbtk_database_versioned.loc @ 7:fce109bc2aa7 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gtdbtk commit c4750d805711ffa1245a2797439baf52429b4701
author | iuc |
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date | Mon, 16 Sep 2024 14:55:29 +0000 |
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6:a09c8c901603 | 7:fce109bc2aa7 |
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1 # This is a sample file distributed with Galaxy that enables tools | |
2 # to use a directory of GTDB-Tk databases. The gtdbtk_databases.loc | |
3 # file has this format (longer white space characters are TAB characters): | |
4 # | |
5 # <unique_build_id> <display_name> <version> <directory_path> | |
6 # | |
7 # So, for example, if you have the gtdbtk 202 stored in | |
8 # /depot/data2/galaxy/gtdbtk/202/, | |
9 # then the gtdbtk_databases.loc entry would look like this: | |
10 # | |
11 # release202 gtdbtk database release 202 /depot/data2/galaxy/gtdbtk/release202 | |
12 # | |
13 # and your /depot/data2/galaxy/gtdbtk/release202 directory | |
14 # would contain GTDB-Tk database files for release 202, sommething like this: | |
15 # | |
16 #drwxr-sr-x 3 gvk G-824019 4096 Apr 20 2021 fastani/ | |
17 #-rw-r--r-- 1 gvk G-824019 4810764 Apr 22 2021 manifest.tsv | |
18 #drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 markers/ | |
19 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 masks/ | |
20 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 metadata/ | |
21 #drwxr-sr-x 2 gvk G-824019 4096 Apr 21 2021 mrca_red/ | |
22 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 msa/ | |
23 #drwxr-sr-x 4 gvk G-824019 4096 Apr 21 2021 pplacer/ | |
24 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 radii/ | |
25 #drwxr-sr-x 2 gvk G-824019 4096 Apr 20 2021 taxonomy/ | |
26 gtdbtk214 GTDB-Tk database v214 ${__HERE__}/gtdbtk214/ |