Mercurial > repos > iuc > hamronize_summarize

comparison test-data/abricate/report.tsv @ 0:ef76d74a7171 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hamronization commit 17562209ea2b5b8b28f229a5c305e468b04be58e"
author iuc
date Tue, 16 Mar 2021 12:39:05 +0000
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-1:000000000000 0:ef76d74a7171
1 #FILE SEQUENCE START END STRAND GENE COVERAGE COVERAGE_MAP GAPS %COVERAGE %IDENTITY DATABASE ACCESSION PRODUCT RESISTANCE
2 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039729.1 656118 657620 + eat(A) 1-1503/1503 =============== 0/0 100.00 100.00 ncbi NG_047762.1 ABC-F type ribosomal protection protein Eat(A) PLEUROMUTILIN
3 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039729.1 2163439 2163987 - aacA-ENT1 1-549/549 =============== 0/0 100.00 100.00 ncbi NG_052371.1 aminoglycoside 6'-N-acetyltransferase AMINOGLYCOSIDE
4 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039729.1 2564038 2565516 - msr(C) 1-1479/1479 =============== 0/0 100.00 98.92 ncbi NG_048003.1 ABC-F type ribosomal protection protein Msr(C) MACROLIDE
5 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039730.1 43619 44197 - vanX-M 1-579/609 =============== 0/0 95.07 100.00 ncbi NG_048495.1 D-Ala-D-Ala dipeptidase VanX-M VANCOMYCIN
6 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039730.1 44203 45234 - vanM 1-1032/1032 =============== 0/0 100.00 100.00 ncbi NG_048396.1 D-alanine--(R)-lactate ligase VanM VANCOMYCIN
7 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039730.1 45227 46207 - vanH-M 1-981/981 =============== 0/0 100.00 100.00 ncbi NG_048388.1 D-lactate dehydrogenase VanH-M VANCOMYCIN
8 GCF_010120755.1_ASM1012075v1_genomic.fna NZ_CP039730.1 47306 48418 - vanS-M 1-1113/1113 =============== 0/0 100.00 100.00 ncbi NG_048450.1 VanM-type vancomycin resistance histidine kinase VanS VANCOMYCIN