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diff test-data/reference.fasta @ 2:0170f93788b7 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/happy commit 4abfaf634dcfed1dfce1bcf199c12acc33982ba4
author iuc
date Fri, 24 Oct 2025 13:26:58 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/reference.fasta	Fri Oct 24 13:26:58 2025 +0000
@@ -0,0 +1,126 @@
+>chr1
+GACAGGTACAAGAAGGAGTATGCATCAATGTGGTCGTGTGGAACAAACGCCACTGGAGACTGGGTTAACCATTCGCTCCA
+GCGTCATGAAAGTCACTGTTAGGGCGACCTTCGATTCGGATGTGACATTTCATTACATTACGCTCAGGACTGCGAACGAA
+AGATTAAGAATGCTTAACCCGGTACCTAACCCATCTGATTTTTACACACTCTCCTTGGACTGGGAGGTATAAGGAATAGG
+CGGTAGACGCCTACTTAACTTTCATGGTGATCGTAAAGCGGAGCCTTACCATGCGGCAATTGTGAACTTTTAAATTCGAT
+TTTTAGCTTTTCTATTATCCTAAACTTCGCTGTATATCACGCGGCGCGATGGGGCAGCCTGCCCCCACTGTGCGACCGGC
+CACTTAAGGCTTGAAAACTACGAGCAGATTACATGAATCTGTGTTGGGTGTGCCAGTGGCACCCGAAGGACGCACTGGTT
+CACTTTCGGGAACACGCACAGACGAGACACACTCTTCAAGTCGTGTTAAAAGGAGTAGGATTAACGTCGAGGATTGATTC
+CCGCTTATGTGCGTCTGCCGCTTATACGCATAATCTGCATAGCTGGCTAAGCGCGCGCGCCAAAGTAACGTGCAAAAAGC
+TGGATCTGCCAATCTCAGAAGCTATGTAGCCTTCGGGTAAGAAAACGCAGGCGTTGGTCGGTTAACGGCAGGTGCAACCC
+ATTGTTGCATCGTAGGCACCGTCGCTTGCCCTCGTGGCACTGTAGTCGATGAAGGATTCATCGGCTTAGCTGTTCTCTGT
+CCGTCAGCGGCCAGGATAGGTCGTTCAGGTTCGCGCGACTCGGTTTCCGTTAAGTTGCAGTCGTATCCAGGTAATGATAC
+CCATTGACCGGCCTACCAGGTCTGCGGGAGCTCTGCGGGGGTGTGCCGGACGAAGTGTTCTCTGCATATTGTTTCTAGCG
+GGTTAAATGTAATTCCATCCATACGGTCGACACCTACCTTAGGTCCAATCGGGATAAGATAATCATATAACAGAATACAA
+GGGCTGAGTATTGCTACCGCTAAGACGGCTGCGAGTGTGACACCCACGCATATAAGTGGGCACGTTGTGCGAGAATCTGT
+TTTGGATTCAGCCATGCAGAGACCCGTGAAAGGCGCCCTACCGCGACGACAACCAGACGGTTATAATTGGGCAACTGTTA
+TAGGCCCCAGAGTCGTTAAAGTGATCTTCTGGGTGAACCCAGCCATATTGGCGTTCTGCCAAATCGGAACCGACCCCGTG
+AAGCGGTTCGACTGCGTCCTTGTGGGGCCCAATCAAATATTTACTACATTTACCGACCGCGCTCTCTTCCCGTTTACGTG
+ATTCTCTACTACCAAGATCATTGTACTGAGCAACTGGGACCACTCATGAGAACGACGATAGGTGCCGTCATCGGTGCAGT
+ATCGGTATCCAAATGTGCTACTTCACTGTCTCCTGTGAGTGCAGCGCGCATCTCTTAGCTGTAGTAATCCGGGTCTGGCG
+AAGCCGCCCTCTCATCTCAGTCCAGTTGTGTGAAATAGCTGGACTGGTTATGCGCTTGATCTAAAACGCTTTCGGACGGA
+TAGGGTGTAAGGGTCGCGCTCTGCAACCAGCGGTTACGCCCAACCGATACGCTCGCCATGTACACTGCGTCTGTCCGAGA
+GTCTGATCTCTTAGGAACCCGGCGATGCCTGGCTCGTGTGGACTTTGGGAGGTAGATAACAGCTTTGAAACGGCATCCTG
+GGGAAGATCCAGCCTTCAGCTTTTCCGCCCCAGTGAGGAGGGACGATAGTCTTCATCGTAGGGTTATATTCCTTTTAGAT
+CTGCTTCAAACCAGTGTATTTGAGAACACATTCGAGGAACCGTGCATCGAAAGGCGCGGAATTACGAGAGGGACGAAGAG
+TCGCACTGCTGGACATTATACTTTGCTCTTCGGGGCAGGGAAACGGGTACCTGATCTTAAAAGGAGCAATAGCTGCGGCC
+AGACATTTGCCTTGTCCACTCTCGTTGTGAAAGTTAGACGGTATGGCTCTATTATCAGATGTCGCCGCATCTTCCGAACT
+GCACCTCGGCTTGCATAGCTGGAATTGTCTAGAGCGGGCCAGAGCTATGTTAAAAGTCCCCGTAGTGTTACGAAACCTGT
+AGAATTCAATTGATCTGTGCAAATCTCTATGGTACTCTTCTACTCCTCGGAGTGAAGGGCAACCCAACGCACAGCCCCAT
+TTGACACCACCCACAGGAACTCGTCCTTTACTACTTCGCGACTCAGGGGGTCGCCGTTCCGAGGTATCCGTGGTCTGGAT
+GCGATGCTTCACGGGGCCTGGCAACTATACCACCCGCCTATGGATAAAGTACAGCAGAGCGATTAATACCCTGGGGGCTG
+TGCGAAACAGGCACAGGGTGCACCACAATTGCGCTCAATCCGACGTGAATTCTAGGTATTCTCCTCTTATGCGGAAAAAC
+CGCGCCTTGATTTTTATAGTTGCGCCCGTAGCTCTCATGGCGCAGACACTCGGCCGAATCATCATAGAGATCGCCTACCG
+AGGACAAGAGTTCAACGACTATTATAGAGCGGACGTAATGCTCACAGGGTGTGCGGGCATTCACGGTTTATGCGTTTAAC
+AATGGGCGAGGCCGATGCGTGAGGTAACCGCGGAGGATGTGAATCTTATCAGGACCCGCCAGGAGATACCATTGTGCCCG
+CACGTATTTACCTCGAAGCGCGCTATTAACACTTTAGTGAGACATGATTGGCTAAATAGCTACCTGGCCAATGAACCGTA
+CCAAGTGATCAACGGCTACCGACTAATTATCGGGCTAATCATTCACAGTCAGAAACTAGACCGACAATGGTTTTCGCTGC
+ACATTATGTTTAGCTTATATTCTTAGTGTAGTGGATTCCCAAAGATAAGTTCAGTTTTTCTCACAATTTGATGTTAGACG
+AGTTCTTAGTTAGTAGATATAGGTCCAACAACGTTCCGACTGGAATCCTAACGGTAGGCATATAAAAGGGCCAAGTACCC
+GGAAACATCCCGAGATCCCCACATGACGTGGTTCGTCTCATGGTTGGATATTTACTCTGTCTTACCCCCTTGGCCAGTTT
+GACGCCCCGACAGGATCAGTTATCCCGATATCTCCGAATGTTTGACGATTAATTACTGCTGGAACGATGCATGGCCAGTT
+GGCCATTATGGACTCTGCCCCCGTCAGGTCGGCAATGTCGTCATTTTGGGGGTCCCAGGAGAGTTGGTTTAAACTTAGCA
+CGCTCCCTCTGTATGTCCATAACGTCCGTCGAGACTATCTAGGCTCAACACTAGGAGCACGATCCGGCTTCTCATTCAGA
+GGACGATCGATGGAGCCGCAGGCGGCGATAGAAAAACGAGCACATCAGTTGAAGGACATCCAAACTCGATATGACCGTAT
+ACTCCTTGTAGATACGTGACCAGTTATACACCGGTGGTGCGGAGACGCTGTAGATTTACATAAGCACTCTCACGACGAAG
+GCGAGTCAACGGCGGATACTTCGGAAAGGAGATCCTGACTTGTCGTACGATTCGTAGGACGTGCTTTCTTCACGGCGTGT
+GAGCCGTGTGGCACCGGCGTCTTGAAGATACCTGCTATATGTGGATTCGTCTTCGACGTTTTGGTGGTTCAGAAGCCGAG
+CCGAACATGGCGCTCAAAGCGAAACCATGTTTAGCTGGTGCTTCGCTTCTCATAGTATGAAGTTCAGGTTGTGACCAATG
+GACCGCAGGGGTGGATATCATCCGCGACTGTAGTTGCTGGAAGGTCGTCCGGAATAATTTTTCGCAAGCCAGAGTCCGCG
+GCCCAAAGCTAGTCCCGAGTTAGCTAAAGAGCGTGGTCTCATGCCGCGGTTGAGCATGTGCCACACAATCCCATCGGTTC
+GAGCGTGCTGCTCCGGAAAGAACGAATGCCAATAAGAGAGACATGGAGGCACTTATGTTAGCGCCGACAATGCAACGATG
+ACAGTTTGGCAGATTCGGTGAACATCTCAGTGAAGGCCAGCTCCCGTCTCCGCCCGGTGGCGAACCGGGATAAATCAAAA
+CTGGGGTTGCAGTCAGGAAAAAATTCCGGGAACTTCTCGATGCCAACTTTTTGGTGTTTCCGAAAGTGACTGATAAGTAT
+CCTCTGTCAGTAAAGAATGGGTGACGCTTTCTTCAGATCGGCGATGCGAAGCGCGACGCCAGCTCAAGAACACCATATAC
+TTGGTCGGCGATCGCCCGTCAATTAGGATCGCGTCCGAATCGGTAAACCCGCCTCGTCAAGGTGAAAATGACTACAGTCA
+CGATAGTCCTGCCTGAGGGGGGCCGTCCCCATTCCATTCACCAACCGCAGCCCCATTTGCGTCTACGGCGAAAGAACGGA
+ACCCTTCTCTTATACATTTATATCGACTGTCGCCGATGCGATTAAGCACATAATCGCAAAGTTGAGGTAATTTTCAGCAT
+CCCGAACGCTTGAACCCAGCAATTAGGGCGCGGCGAGATATACAGTGGGCCGATACTATAGTCCGTCAACTTAGGAGAGA
+GCAGCCGTAACCATCCCTCCTCGGGATTCTCCGTGGTCCATATGCGGTAACACGATACTGGTATGGTGCGGAATCTCTTA
+GGATCCAGAGAAGCCGGACCAAGACAGTAAGCGAGGAATCTAGCCCGACTGTCAATACTTAATTTTAGACAAGAGCCGAG
+AGGAACTGAGACCTGTATGACTACTGAGCTAAGCCACCGATGTGTTTAGCATGACTGGAAATTCGAAGTTCGGATTATTC
+GTACTGTTCCCTTTCTAATGCGAAGCGCGGGCTCAAATACCGTTATTTCCCACAGCCGGGGTTGCTATGCGGGGACCCTC
+CGAGATCGATTGACCAGGACCGTTGAACCGCTGTCCTTGGATAGCCTCGAAAGCCTGATAGCCAGAGGGTAAGATGTCTA
+CAGGGGTACGTACCCACGCAGCGGGGAGGTCGTTCGCGTCAGGGCAGGTAAGATTTCCGGAACTCGCAGCGGAACCGTTG
+CGTGCTCGTCGCGAGTTCTCATGTGCGTTGCACCACTACATTTCACGATGGTATTTGAGCGGATGGACAGGCGCTCACCC
+AACAGGACCAGCAAGCCACGAACAGGTGGCTGGGTTCATTCCGGCAATGTCGGTTCACCCATGAATTCGTGCCGGTCCTG
+TCTGAGATGCGCGTATAATTCCGATTTGAAAGCGAGCGTCTCTCAATCACCGAGTCTTAGCCCCGGCACTTATGAAAGCC
+TAGCCTGCAGGCCAGGTAGCGCTGGACGAGTTTCATACGTAGTCACTCGCGCTTCATGGGACAATTGCAGTCACTAAAGA
+CTCGCTTCAATACTTACGAGCGTAACCGTGCGCATATCGTGATGTCTTCCAGCTGGGACGAGGTAAACACAAATGTTGGA
+TAGTGTTGCCTGTCCTTCAATCCATCCCTGACATAGTGAAGCCTAGTGCGTGGTCCTTTGATTCGTCGCGTAGTACTGAA
+CAGTGCAGGAAGGCAGCGTCTAATAATGCGTAGTAAGCTAGAAACTCAGTACTATCTTGCTGATTTGCAACGGCTAATGT
+ACAAAGTCTTGAGGCTGAACTGTCAAAGACTGATGCATGTCAGAGCCCTTAGTATCATGGCAGCTCAGTCACCTATCCAG
+GTAAGAATCACTGTGGATTATCTGTCGGACGTGAGATACTAGCTTCAGAGTACGACCGTGACTTCTCCGTATCACCTGTT
+ATGATGTACGCAGAGATAACTGTAGACCGCACCGAGGGCGTTTTATCATCTACGCTGGCTGACCGCATATGCCGCGGTCC
+ATACCTTACCATGCTTGGAAACACAGACCCGACTCCACCAGTCGCCTTGAGTCGGTAGCCTCAAGGATCAGCGAGACGTT
+CATCCCCTTAGCTTCTTCTAGAACTTATTACTCGGTAACGATTCGCAACTTCGTCCGAACTAGGGTGCGAGGTAACTAAC
+CTCCGTGTAATGTTGCGGAGTAGCCCTAAAATGTGGGTACATTCCCTTGTCGATATAAAAAGTATTAATGAACAGTTTAT
+ACATTTCAGGAGAGAAACTGTAAGGCGCTACCAAATAAATGGACACGCTCGCTAATCGATCACGAACGATTATCGTATGC
+GGCTGCCGCCCTACCGAAAAGTCGAGAATTTAGCCCTGTACTCCCCAGTCGCAGCAGGGGCTGCCTGCTCAATCGATCAC
+CCGAGGTACCACCTGTCGGTCCGTAGCGTCGCCCTTTGCATCAGATACATCATGCTCGACGCTAAGTGATGCTGGTCGGG
+CAAGCCCTAACTGCGCAAATCGCGAAACTGATTCATAGTTCCGATGAAGTGTTTCTAATCGCGACAATCCGCCTCCGTTT
+CGTATGTGTGTAGCTCTATTCTCTCATAATTGTTCATTTCCTGTTTGGCGTGCAAGGTACGCAAGTTTTGTCCGCGTTAC
+ATTTATTGGTTAGACCCACTAGCTCGAGATTCCATGTCGCCACCGTCGCAACGGGGGCAACATTTTGGACGCCCTGGCGT
+TACGAAAATTGTCTGTCCTCTTATGTAAAACGCTTACGCCTTAATAAGCTGGTGGCATGTAGGCGTTAATGCTGATGTCG
+GTGAAGCAATCCATTATATCTGACCTCGAGTGCTCGCTTGCCACCAGACGGCCTCAATTGCAAAACAGGCCAGAGAACAT
+CGCGGCTTAAGGTAGAAACGTTGCGTCGGCCAAAATTAGGCGTACCCAAAGTCTGAGTAAGGTTGGGCCCGGGTCGGCCA
+TCCCTCGACACAATCGTGACGTTGGTTTGCGGAAGACTCAAATCATTAACGAACCCATCAGGGGTCCTAAGTTTAAGTTA
+CCGGAGCATCCTATCGACTCGATCATCCCTTCAAATTACTAATGGTAGGGGCCGGCGTACGTGCAGTGGTTCACACGGAT
+CAGGTAATGATGTAACGCAGACGCTTTGTGGGCCTGGGGACGTCAGTAATCCCGGGCCCCCTCTTAAGAGTAACGTCTGC
+AGAACTCCTAGATTATCACTCGGTTCGGTGCCCTCTGCACGTTGGTGGTGGAGAGGAGACTATAATAGTCTGCATACCTC
+CAAAACACCAGCAACCCCCTAATGCTCAACCCCATCTGAGTCCAGATCTTGCTCACTCTATCGTCCGGGAGGCCAAGCCG
+TCGCCTCATCCGAGGACTGCTGTGTGAATGGCTTCATGACTCAACTCAGCGACCCTGAATCTGCGGGGGAAACGAGTAGT
+GGCGCTGTATCTCGCCTTACCCAAAGAGTCAAACGACTGGCCAACACTTTGTGGAAACTAATCCGAGGCCATAGGACTTG
+CTTCCAAGATAGGCCGCATACCTTCTTACCCAGGAGTTCAATTCGGTGCGTGCACTAAAAAGAGTCGAATCAAACAGTAA
+AATGCGAATTAGCTATCATGTTTTTAATTACCGTAAGAGTCATTTTTAACGAGTGGCCCCGGCCCTGAAATCCTGTCGAA
+CCGCGCCCTCCAAGCATGGTTAAAAACCTGCGTTTGTACTTCCGGCGTACAGCGTTGCTCATGACGCGATATTCCGCTGC
+ATTATCGGGTTACGAAGCTAAGAGCAATCAGAAGATCAAGCATTAACGCGTGGGCAAACTGTTCGGCTCGGCGTAATGCT
+AGCTATCGCTGGACTGTAATCCCGCAGGCGTCAATCGCAGATATTAAACGCATGACAAGAGTTGGTCCAATTTCAACTCA
+GATTTAACACGAAGTAACACCCCATGCAACGTAGTTATGTGGTGCGTCTCCGGCGAGTAGTCGTGACCAAATGTGCCGTG
+TGCATCAGTGAGGGCCCATAAGAAAGTTAAGCGAAACCGCTATCACGGTTTACTTTGAGCCCCGAACAAAGGCTTTCCGG
+CATCGACCTGGCGGGTGAATGGGGCCGCGTTATGTCGTGACTCCTGCCCTGAGTCAGTCCTTAAGGGGACGAATCTAAAT
+CTCGGTACCCCGCGAATAGTAGAGTTTCCCCTTTTGCACCACGGTAGTCGTCGGCCATTTACATCCGCGACTTTTTGCAA
+GGTGATCGGTACAGAATGACGATTTACCTAAGGAGTTTGGCGGCGGTTAAAAGTGACTTGAAGTTCCGTGGACGCATTCC
+GAGTGGCTATGCTCGCTCTAGTGATACCTGTTGCGTTCGCGATCATGTTGCAAGCAAGGAGGGTATCTTATAATGGTGCA
+ACGTGCGTGTTGCGCAACGGAGGCGTACGCGAATTATAGGTCGGGTATTTAGAGTAAAAGTATGCGCTACTGTGCGGGTC
+GAATAACTTGACAGACCTCACCGGAGTGACGTGCATCAGAAAGAGCCCTAACTCATAGCTCGGTGGTATCCGTGGTCAAG
+AACGAGTGAGGATTGCCTTTCTTCCAAGTAAGGCTTCGGCGTTGCGTGGGGAGTTTGGGTGTGAATGTCCCATAGTACCA
+GGACTGTACGCCGCCATACACAGAACAGACCCATACTACCCTAAACGTAACGCCGTGCTTGTTCAAAAGTAGCTGCCCTA
+AGATTTATAGTGGATGGAAATTCGAACCGACCGGCCCCCCAAAGACTAATCCAAGTCGCTGCGACTAGAGTGAGTAGCGT
+AGAAGCTTTTTCGTACTGAGGAAGTGGCGTTATCTCCAAAGTTCGGCAGGAAAAATTCTGATGACGCAGGGCGCATTATA
+TGTTTAGCGTGGTACGTTAAGCTAAATACGGAAACGAAATTAGGTGCATTGAAAAGATTAGCGACGCACAAGGATACGTA
+TACAGATCTTAAAATCGATTTGAGGGAGCTCATGTTGAATAGCCGTCAGTCATACCCGCTCTGACCGGTCGCGGGGAATA
+GTTACTTTCATTTATAATGCATCGGATTACAAGTAAGGGCCCTGCATATGATGTGTTGGCATGTAAGAAGGTTCCGTATG
+AAAGTACGAGTCGGACTGGTACTACCCATGTGACGATAGCGTCACTAGTTGTATGGGTCTCCTCTTCAGAAGCTATGTTA
+ACTACCAATCCCTGAAGATCTTACTTCGGCTGGGGATATCACACCACGTCAGTTTACCTCGCCAACGCAGCTCCCATTGC
+GAACCGTGGCTATCTACCCGAGCGCATGAGGCTTGGCACATATCGACTACTAATCGACCTTGATATGTGGCCCGGTAACA
+GGCTGCCGTTTTAGGCCTTACGACCACCACATTCTGGACACTCTTCATCAACTTGCTTATAGTTGAGTATGCATGGTTGC
+GTAACGGAGTACGACGCATCGATTTGCTGGGACGACTACCTCCAATAGCCTTAAAGGATTCGGAGTAAAGATAACAGTCC
+TCGCGCGCAAGTCCGTCTTCTCGTGGCGCGAAAGGCTGTCAACTCAGCTACACCTTGCGGACGTTATCTCCATCTCAACC
+GCGTTTCTCTTAGAATGCTCGCGCGCTTACGAAAACGCAATCTTTTCTATACGTCAACATTTTCCAGGGTCGACCAGTGG
+AATAAATAAAGGTTCCAGTACTTGTACACTGATGATAAGCCTACAGGACAGGCCCGGCCGGTAAACAAAGGCAGTCATCC
+GGAGGCCTACAATAACCACAGTGTGCAATGTTGAAACGCGTCCCACGTTTTGAGGATTGACAGTCGATGTTGTCTGCGTC
+CTCAGCGCCTTCTCGCATGGCCTAACGACCGACCCTGTAACTAGAACCTGCTACCCGGCGGAAGCAGGGCTCACCTGCCC
+CAGTCTGCAGAGGCTCCATTCAATGCACCCAGGGAAAGCAGTCCTACGAAGAAACTCAACTTTGTGTGCGATGAGGCCGT
+CGCGACCACGACGTGATTCGCTCTGCGCAGCGCGTCTCCTGCCGGTTGACTCGCATAAATCTTTGATATTCAGATATGTT
+CGCTGACCCAATTAGGGATTCCGAAGTGCTGCCGGAACCAATCAAGCATTCGATTAGTTGCAGACTCACCCTAGGTGTAA