Mercurial > repos > iuc > hicexplorer_hicdifferentialtad
comparison test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 0:e64fa16addd9 draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
| author | iuc |
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| date | Tue, 16 Mar 2021 15:26:17 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:e64fa16addd9 |
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| 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 | |
| 2 # This file contains the p-values computed by fisher test | |
| 3 # To test the smoothed (float) values they were rounded up to the next integer | |
| 4 # | |
| 5 # Alpha level 0.5 | |
| 6 # Degrees of freedom 1 | |
| 7 # | |
| 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 | |
| 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 | |
| 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | |
| 11 chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366 | |
| 12 chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 1.00000 | |
| 13 chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.06013 | |
| 14 chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.22603 |