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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
author iuc
date Tue, 16 Mar 2021 15:26:17 +0000
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
# This file contains the p-values computed by fisher test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 810.0
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 978.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	4512000	4529000	Sox17	41000	810.00000	24.80000	978.00000	33.20000		0.69177
chr1	4534000	4544000	Sox17	56000	810.00000	7.00000	978.00000	13.20000		0.37830
chr1	4585000	4590000	Sox17	102000	810.00000	8.00000	978.00000	2.40000		0.12513