Mercurial > repos > iuc > hisat2
comparison hisat2_macros.xml @ 31:f4af63aaf57a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hisat2 commit 30058304dcfa992f24eb7a0bdf81b280a69bea03
| author | iuc |
|---|---|
| date | Wed, 06 Jul 2022 10:26:44 +0000 |
| parents | 6c19daec423d |
| children |
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| 30:6c19daec423d | 31:f4af63aaf57a |
|---|---|
| 1 <macros> | 1 <macros> |
| 2 <token name="@TOOL_VERSION@">2.2.1</token> | 2 <token name="@TOOL_VERSION@">2.2.1</token> |
| 3 <token name="@VERSION_SUFFIX@">0</token> | 3 <token name="@VERSION_SUFFIX@">1</token> |
| 4 | 4 |
| 5 <xml name="paired_end_options"> | 5 <xml name="paired_end_options"> |
| 6 | 6 |
| 7 <param name="rna_strandness" argument="--rna-strandness" type="select" label="Specify strand information" | 7 <param name="rna_strandness" argument="--rna-strandness" type="select" label="Specify strand information" |
| 8 help="'FR' means a read corresponds to a transcript. 'RF' means a read corresponds to the reverse complemented counterpart of a transcript. With this option being used, every read alignment will have an XS attribute tag: '+' means a read belongs to a transcript on '+' strand of genome. '-' means a read belongs to a transcript on '-' strand of genome."> | 8 help="'FR' means a read corresponds to a transcript. 'RF' means a read corresponds to the reverse complemented counterpart of a transcript. With this option being used, every read alignment will have an XS attribute tag: '+' means a read belongs to a transcript on '+' strand of genome. '-' means a read belongs to a transcript on '-' strand of genome."> |