annotate test-data/MADE1.out.domtblout @ 0:62479bdcc059 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4164b44c651bcbdac6637eccce61b2a802c9b569

#                                                                                      --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession    tlen query name                    accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#-------------------  ---------- -----          -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   7.1e-18   51.5  28.5   1   5         1         1   -4.3   0.1    30    54 80044 80068 80030 80073 0.80 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   7.1e-18   51.5  28.5   2   5         1         1   -6.7   3.3    13    71 154012 154072 154011 154076 0.75 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   7.1e-18   51.5  28.5   3   5     2e-10     2e-10   27.6   0.7     1    44 174456 174514 174456 174577 0.62 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   7.1e-18   51.5  28.5   4   5     2e-12     2e-12   34.0   0.7     2    80 302388 302466 302387 302466 0.86 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                DF0000629.2    80 humanchr1/239220001-239550000 -          330000   7.1e-18   51.5  28.5   5   5     0.011     0.011    2.8   0.7    27    75 304060 304107 304021 304109 0.61 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
#
# Program:         hmmscan
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SCAN
# Query file:      test-data/dna_target.fa
# Target file:     test-data/MADE1.hmm
# Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa 
# Current dir:     /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer
# Date:            Tue Feb 10 14:40:35 2015
# [ok]